RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 SLC25A23Q9BV35 468 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 THAP2Q9H0W7 228 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 ING2Q9H160 280 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 RBSNQ9H1K0 784 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 EPB41L1Q9H4G0 881 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 TRIM39Q9HCM9 518 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 EPHA6Q9UF33 1036 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 NTNG1Q9Y2I2 539 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 TTLL3Q9Y4R7 772 aa9.43□□□□□ -0.9
MCF2L-223ENST00000473345 PCDHGA9Q9Y5G4 932 aaKnown RBP9.43□□□□□ -0.9
MCF2L-223ENST00000473345 TOX3O15405 576 aaPredicted RBP9.42□□□□□ -0.9
MCF2L-223ENST00000473345 SLC25A14O95258 325 aaPredicted RBP9.42□□□□□ -0.9
MCF2L-223ENST00000473345 RECKO95980 971 aa9.42□□□□□ -0.9
MCF2L-223ENST00000473345 VIPP01282 170 aa9.42□□□□□ -0.9
MCF2L-223ENST00000473345 JCHAINP01591 159 aa9.42□□□□□ -0.9
MCF2L-223ENST00000473345 SLC4A1P02730 911 aa9.42□□□□□ -0.9
MCF2L-223ENST00000473345 PYGLP06737 847 aa9.42□□□□□ -0.9
MCF2L-223ENST00000473345 PRF1P14222 555 aa9.42□□□□□ -0.9
MCF2L-223ENST00000473345 NFKBIAP25963 317 aa9.42□□□□□ -0.9
MCF2L-223ENST00000473345 ARCN1P48444 511 aaKnown RBP9.42□□□□□ -0.9
MCF2L-223ENST00000473345 PGDP52209 483 aa9.42□□□□□ -0.9
MCF2L-223ENST00000473345 RAPSNQ13702 412 aa9.42□□□□□ -0.9
MCF2L-223ENST00000473345 ASIC2Q16515 512 aa9.42□□□□□ -0.9
MCF2L-223ENST00000473345 STX1AQ16623 288 aa9.42□□□□□ -0.9
MCF2L-223ENST00000473345 INSCQ1MX18 579 aa9.42□□□□□ -0.9
MCF2L-223ENST00000473345 ANKRD20A8PQ5CZ79 823 aa9.42□□□□□ -0.9
MCF2L-223ENST00000473345 ZNF789Q5FWF6 425 aa9.42□□□□□ -0.9
MCF2L-223ENST00000473345 CRB2Q5IJ48 1285 aa9.42□□□□□ -0.9
MCF2L-223ENST00000473345 PLEKHS1Q5SXH7 462 aa9.42□□□□□ -0.9
MCF2L-223ENST00000473345 FAM198BQ6UWH4 519 aa9.42□□□□□ -0.9
MCF2L-223ENST00000473345 ZBTB2Q8N680 514 aa9.42□□□□□ -0.9
MCF2L-223ENST00000473345 NIPA2Q8N8Q9 360 aa9.42□□□□□ -0.9
MCF2L-223ENST00000473345 PRR7Q8TB68 274 aa9.42□□□□□ -0.9
MCF2L-223ENST00000473345 NAP1L5Q96NT1 182 aaPredicted RBP9.42□□□□□ -0.9
MCF2L-223ENST00000473345 BPIFA3Q9BQP9 254 aa9.42□□□□□ -0.9
MCF2L-223ENST00000473345 MLPHQ9BV36 600 aaPredicted RBP9.42□□□□□ -0.9
MCF2L-223ENST00000473345 NUP85Q9BW27 656 aa9.42□□□□□ -0.9
MCF2L-223ENST00000473345 SPATA16Q9BXB7 569 aa9.42□□□□□ -0.9
MCF2L-223ENST00000473345 RAB33BQ9H082 229 aa9.42□□□□□ -0.9
MCF2L-223ENST00000473345 CHST8Q9H2A9 424 aa9.42□□□□□ -0.9
MCF2L-223ENST00000473345 STN1Q9H668 368 aaKnown RBP9.42□□□□□ -0.9
MCF2L-223ENST00000473345 ANO10Q9NW15 660 aa9.42□□□□□ -0.9
MCF2L-223ENST00000473345 AIPL1Q9NZN9 384 aa9.42□□□□□ -0.9
MCF2L-223ENST00000473345 CFAP20Q9Y6A4 193 aaKnown RBP9.42□□□□□ -0.9
MCF2L-223ENST00000473345 CELSR2Q9HCU4 2923 aa9.42□□□□□ -0.9
MCF2L-223ENST00000473345 CACNA1DQ01668 2161 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 CROCCQ5TZA2 2017 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 A6NL46 340 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 PDZK1P1A8MUH7 402 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 C21orf140B9A014 251 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 GAPDHSO14556 408 aaPredicted RBP9.41□□□□□ -0.9
MCF2L-223ENST00000473345 CBX6O95503 412 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 CCNCP24863 283 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 GJC1P36383 396 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 ZNF165P49910 485 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 RPL26P61254 145 aaKnown RBP9.41□□□□□ -0.9
MCF2L-223ENST00000473345 MYL5Q02045 173 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 IQCB1Q15051 598 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 PLEKHN1Q494U1 663 aaPredicted RBP9.41□□□□□ -0.9
MCF2L-223ENST00000473345 ANO6Q4KMQ2 910 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 ATP13A5Q4VNC0 1218 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 ZNF569Q5MCW4 686 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 AGAP9Q5VTM2 703 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 C1QL3Q5VWW1 255 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 NPNTQ6UXI9 565 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 WASH2PQ6VEQ5 465 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 MAMDC2Q7Z304 686 aaPredicted RBP9.41□□□□□ -0.9
MCF2L-223ENST00000473345 LRRTM4Q86VH4 590 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 TICAM1Q8IUC6 712 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 RAVER1Q8IY67 606 aaKnown RBP9.41□□□□□ -0.9
MCF2L-223ENST00000473345 BBS5Q8N3I7 341 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 TRAM1L1Q8N609 369 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 EFCAB3Q8N7B9 438 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 RASGEF1AQ8N9B8 481 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 SPDYE1Q8NFV5 336 aaPredicted RBP9.41□□□□□ -0.9
MCF2L-223ENST00000473345 SPATA22Q8NHS9 363 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 FATE1Q969F0 183 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 FAF2Q96CS3 445 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 ZNF501Q96CX3 271 aaPredicted RBP9.41□□□□□ -0.9
MCF2L-223ENST00000473345 SNRNP40Q96DI7 357 aaKnown RBP9.41□□□□□ -0.9
MCF2L-223ENST00000473345 ZNF514Q96K75 400 aaPredicted RBP9.41□□□□□ -0.9
MCF2L-223ENST00000473345 TIMM29Q9BSF4 260 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 ZFYVE1Q9HBF4 777 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 ZBTB20Q9HC78 741 aaPredicted RBP9.41□□□□□ -0.9
MCF2L-223ENST00000473345 BPIFA1Q9NP55 256 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 WASH6PQ9NQA3 447 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 FGF21Q9NSA1 209 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 POT1Q9NUX5 634 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 ASF1BQ9NVP2 202 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 CUEDC1Q9NWM3 386 aaPredicted RBP9.41□□□□□ -0.9
MCF2L-223ENST00000473345 PKD2L2Q9NZM6 624 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 NFKBIL1Q9UBC1 381 aaPredicted RBP9.41□□□□□ -0.9
MCF2L-223ENST00000473345 RARRES3Q9UL19 164 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 PSMD13Q9UNM6 376 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 RPL26L1Q9UNX3 145 aaKnown RBP9.41□□□□□ -0.9
MCF2L-223ENST00000473345 FARSAQ9Y285 508 aaKnown RBP9.41□□□□□ -0.9
MCF2L-223ENST00000473345 ZNF711Q9Y462 761 aa9.41□□□□□ -0.9
MCF2L-223ENST00000473345 TEP1Q99973 2627 aaKnown RBP9.41□□□□□ -0.9
MCF2L-223ENST00000473345 HIVEP3Q5T1R4 2406 aa9.4□□□□□ -0.9
MCF2L-223ENST00000473345 KMOO15229 486 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms