RNA–Protein interactions for RNA: ENST00000473095.1

CHCHD2-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2, humanhuman

TSL 1 (best)

Gene CHCHD2, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2-202ENST00000473095 GPR18Q14330 331 aa13.13□□□□□ -0.31
CHCHD2-202ENST00000473095 PIGHQ14442 188 aaPredicted RBP13.13□□□□□ -0.31
CHCHD2-202ENST00000473095 INPP5JQ15735 1006 aaPredicted RBP13.13□□□□□ -0.31
CHCHD2-202ENST00000473095 IFI16Q16666 785 aaKnown RBP13.13□□□□□ -0.31
CHCHD2-202ENST00000473095 INSCQ1MX18 579 aa13.13□□□□□ -0.31
CHCHD2-202ENST00000473095 E4F1Q66K89 784 aaPredicted RBP13.13□□□□□ -0.31
CHCHD2-202ENST00000473095 PDPK2PQ6A1A2 396 aa13.13□□□□□ -0.31
CHCHD2-202ENST00000473095 CRTC3Q6UUV7 619 aa13.13□□□□□ -0.31
CHCHD2-202ENST00000473095 FAM92BQ6ZTR7 304 aa13.13□□□□□ -0.31
CHCHD2-202ENST00000473095 SYVN1Q86TM6 617 aa13.13□□□□□ -0.31
CHCHD2-202ENST00000473095 LRRTM4Q86VH4 590 aa13.13□□□□□ -0.31
CHCHD2-202ENST00000473095 BPHLQ86WA6 291 aaPredicted RBP13.13□□□□□ -0.31
CHCHD2-202ENST00000473095 ZNF547Q8IVP9 402 aa13.13□□□□□ -0.31
CHCHD2-202ENST00000473095 NIPA2Q8N8Q9 360 aa13.13□□□□□ -0.31
CHCHD2-202ENST00000473095 GPR26Q8NDV2 337 aa13.13□□□□□ -0.31
CHCHD2-202ENST00000473095 UBXN4Q92575 508 aa13.13□□□□□ -0.31
CHCHD2-202ENST00000473095 GLYATL1Q969I3 302 aa13.13□□□□□ -0.31
CHCHD2-202ENST00000473095 ZSCAN5AQ9BUG6 496 aa13.13□□□□□ -0.31
CHCHD2-202ENST00000473095 SPATA16Q9BXB7 569 aa13.13□□□□□ -0.31
CHCHD2-202ENST00000473095 PDE7BQ9NP56 450 aa13.13□□□□□ -0.31
CHCHD2-202ENST00000473095 AIPL1Q9NZN9 384 aa13.13□□□□□ -0.31
CHCHD2-202ENST00000473095 MYO1AQ9UBC5 1043 aa13.13□□□□□ -0.31
CHCHD2-202ENST00000473095 RARRES3Q9UL19 164 aa13.13□□□□□ -0.31
CHCHD2-202ENST00000473095 PCDHGB7Q9Y5F8 929 aa13.13□□□□□ -0.31
CHCHD2-202ENST00000473095 IGHV5-51A0A0C4DH38 117 aa13.12□□□□□ -0.31
CHCHD2-202ENST00000473095 A1L4Q6 167 aa13.12□□□□□ -0.31
CHCHD2-202ENST00000473095 WIPF3A6NGB9 483 aa13.12□□□□□ -0.31
CHCHD2-202ENST00000473095 PDZK1P1A8MUH7 402 aa13.12□□□□□ -0.31
CHCHD2-202ENST00000473095 CEACAM4O75871 244 aa13.12□□□□□ -0.31
CHCHD2-202ENST00000473095 PTMAP06454 111 aaKnown RBP13.12□□□□□ -0.31
CHCHD2-202ENST00000473095 CD48P09326 243 aa13.12□□□□□ -0.31
CHCHD2-202ENST00000473095 FOLR1P15328 257 aa13.12□□□□□ -0.31
CHCHD2-202ENST00000473095 ARSEP51690 589 aa13.12□□□□□ -0.31
CHCHD2-202ENST00000473095 CHAF1BQ13112 559 aa13.12□□□□□ -0.31
CHCHD2-202ENST00000473095 TUBB3Q13509 450 aa13.12□□□□□ -0.31
CHCHD2-202ENST00000473095 IL10RAQ13651 578 aa13.12□□□□□ -0.31
CHCHD2-202ENST00000473095 SEPT7Q16181 437 aaKnown RBP13.12□□□□□ -0.31
CHCHD2-202ENST00000473095 ASIC2Q16515 512 aa13.12□□□□□ -0.31
CHCHD2-202ENST00000473095 TDRD12Q587J7 1177 aaKnown RBP13.12□□□□□ -0.31
CHCHD2-202ENST00000473095 CCDC122Q5T0U0 273 aa13.12□□□□□ -0.31
CHCHD2-202ENST00000473095 NCBP2-AS2Q69YL0 99 aa13.12□□□□□ -0.31
CHCHD2-202ENST00000473095 IRGCQ6NXR0 463 aa13.12□□□□□ -0.31
CHCHD2-202ENST00000473095 FAM199XQ6PEV8 388 aaPredicted RBP13.12□□□□□ -0.31
CHCHD2-202ENST00000473095 ZNF517Q6ZMY9 492 aaPredicted RBP13.12□□□□□ -0.31
CHCHD2-202ENST00000473095 MAMDC2Q7Z304 686 aaPredicted RBP13.12□□□□□ -0.31
CHCHD2-202ENST00000473095 TRAM1L1Q8N609 369 aa13.12□□□□□ -0.31
CHCHD2-202ENST00000473095 SIDT2Q8NBJ9 832 aaKnown RBP13.12□□□□□ -0.31
CHCHD2-202ENST00000473095 ING2Q9H160 280 aa13.12□□□□□ -0.31
CHCHD2-202ENST00000473095 ZFYVE1Q9HBF4 777 aa13.12□□□□□ -0.31
CHCHD2-202ENST00000473095 IMPACTQ9P2X3 320 aa13.12□□□□□ -0.31
CHCHD2-202ENST00000473095 TTLL3Q9Y4R7 772 aa13.12□□□□□ -0.31
CHCHD2-202ENST00000473095 ARGFXA6NJG6 315 aa13.11□□□□□ -0.31
CHCHD2-202ENST00000473095 OR52A4PA6NMU1 304 aa13.11□□□□□ -0.31
CHCHD2-202ENST00000473095 TCP11X1B4DZS4 312 aa13.11□□□□□ -0.31
CHCHD2-202ENST00000473095 VEGFDO43915 354 aa13.11□□□□□ -0.31
CHCHD2-202ENST00000473095 LPOP22079 712 aaPredicted RBP13.11□□□□□ -0.31
CHCHD2-202ENST00000473095 IDSP22304 550 aa13.11□□□□□ -0.31
CHCHD2-202ENST00000473095 RPL10P27635 214 aaKnown RBP13.11□□□□□ -0.31
CHCHD2-202ENST00000473095 CCL11P51671 97 aa13.11□□□□□ -0.31
CHCHD2-202ENST00000473095 PPP1CAP62136 330 aa13.11□□□□□ -0.31
CHCHD2-202ENST00000473095 RPS15P62841 145 aaKnown RBP13.11□□□□□ -0.31
CHCHD2-202ENST00000473095 DPYSL3Q14195 570 aa13.11□□□□□ -0.31
CHCHD2-202ENST00000473095 KRT81Q14533 505 aa13.11□□□□□ -0.31
CHCHD2-202ENST00000473095 KCNAB1Q14722 419 aa13.11□□□□□ -0.31
CHCHD2-202ENST00000473095 CHRNA6Q15825 494 aa13.11□□□□□ -0.31
CHCHD2-202ENST00000473095 PLA2G4EQ3MJ16 856 aa13.11□□□□□ -0.31
CHCHD2-202ENST00000473095 KHDC1Q4VXA5 237 aaKnown RBP13.11□□□□□ -0.31
CHCHD2-202ENST00000473095 ZNF787Q6DD87 383 aa13.11□□□□□ -0.31
CHCHD2-202ENST00000473095 JMJD6Q6NYC1 403 aaPredicted RBP13.11□□□□□ -0.31
CHCHD2-202ENST00000473095 C11orf96Q7Z7L8 435 aa13.11□□□□□ -0.31
CHCHD2-202ENST00000473095 Q8NA96 180 aa13.11□□□□□ -0.31
CHCHD2-202ENST00000473095 ADAMTS17Q8TE56 1095 aa13.11□□□□□ -0.31
CHCHD2-202ENST00000473095 ZNF514Q96K75 400 aaPredicted RBP13.11□□□□□ -0.31
CHCHD2-202ENST00000473095 NUP85Q9BW27 656 aa13.11□□□□□ -0.31
CHCHD2-202ENST00000473095 ADGRE3Q9BY15 652 aa13.11□□□□□ -0.31
CHCHD2-202ENST00000473095 CASS4Q9NQ75 786 aa13.11□□□□□ -0.31
CHCHD2-202ENST00000473095 ACSS2Q9NR19 701 aa13.11□□□□□ -0.31
CHCHD2-202ENST00000473095 RAD18Q9NS91 495 aa13.11□□□□□ -0.31
CHCHD2-202ENST00000473095 FARSAQ9Y285 508 aaKnown RBP13.11□□□□□ -0.31
CHCHD2-202ENST00000473095 DNAJC16Q9Y2G8 782 aa13.11□□□□□ -0.31
CHCHD2-202ENST00000473095 ZNF451Q9Y4E5 1061 aa13.11□□□□□ -0.31
CHCHD2-202ENST00000473095 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.11□□□□□ -0.31
CHCHD2-202ENST00000473095 SPTBP11277 2137 aa13.1□□□□□ -0.31
CHCHD2-202ENST00000473095 SEC16AO15027 2179 aa13.1□□□□□ -0.31
CHCHD2-202ENST00000473095 GOLGA6L6A8MZA4 724 aa13.1□□□□□ -0.31
CHCHD2-202ENST00000473095 MFAP3LO75121 409 aa13.1□□□□□ -0.31
CHCHD2-202ENST00000473095 CLDN1O95832 211 aa13.1□□□□□ -0.31
CHCHD2-202ENST00000473095 JCHAINP01591 159 aa13.1□□□□□ -0.31
CHCHD2-202ENST00000473095 VARSP26640 1264 aaKnown RBP13.1□□□□□ -0.31
CHCHD2-202ENST00000473095 DCTP40126 519 aa13.1□□□□□ -0.31
CHCHD2-202ENST00000473095 CD86P42081 329 aa13.1□□□□□ -0.31
CHCHD2-202ENST00000473095 DRG2P55039 364 aaKnown RBP13.1□□□□□ -0.31
CHCHD2-202ENST00000473095 ACY1Q03154 408 aa13.1□□□□□ -0.31
CHCHD2-202ENST00000473095 MRPL49Q13405 166 aaKnown RBP13.1□□□□□ -0.31
CHCHD2-202ENST00000473095 TRIM14Q14142 442 aa13.1□□□□□ -0.31
CHCHD2-202ENST00000473095 EIF2S3LQ2VIR3 472 aaKnown RBP13.1□□□□□ -0.31
CHCHD2-202ENST00000473095 PRR30Q53SZ7 412 aaPredicted RBP13.1□□□□□ -0.31
CHCHD2-202ENST00000473095 FIGNQ5HY92 759 aa13.1□□□□□ -0.31
CHCHD2-202ENST00000473095 ALS2CLQ60I27 953 aa13.1□□□□□ -0.31
CHCHD2-202ENST00000473095 TMC3Q7Z5M5 1100 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms