RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 SLC38A9Q8NBW4 561 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 FAM71BQ8TC56 605 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 C19orf60Q96EN9 201 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.16□□□□□ -0.94
VCL-204ENST00000472585 UNKQ9C0B0 810 aaKnown RBP9.16□□□□□ -0.94
VCL-204ENST00000472585 BRD8Q9H0E9 1235 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 ING2Q9H160 280 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 NUP62CLQ9H1M0 184 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 OR2AG1Q9H205 316 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 CARD9Q9H257 536 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 FAM83DQ9H4H8 585 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 ACTL8Q9H568 366 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 RMI1Q9H9A7 625 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 SLC40A1Q9NP59 571 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 RBM22Q9NW64 420 aaKnown RBP eCLIP9.16□□□□□ -0.941e-6■■■□□ 15.8
VCL-204ENST00000472585 SEMA5BQ9P283 1151 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 MYO1AQ9UBC5 1043 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 ENTPD4Q9Y227 616 aa9.16□□□□□ -0.94
VCL-204ENST00000472585 TACC2O95359 2948 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 C1orf232A0A0U1RR37 186 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 ANKUB1A6NFN9 424 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 ARGFXA6NJG6 315 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 LRRC53A6NM62 1247 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 OR5K4A6NMS3 321 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 ANKRD66B4E2M5 251 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 C21orf140B9A014 251 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 MATN3O15232 486 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 TOX3O15405 576 aaPredicted RBP9.15□□□□□ -0.94
VCL-204ENST00000472585 KRT86O43790 486 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 MTX2O75431 263 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 CBX6O95503 412 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 HLA-DQB2P05538 268 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 PYGLP06737 847 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 GZMAP12544 262 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 SKILP12757 684 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 NELFEP18615 380 aaKnown RBP9.15□□□□□ -0.94
VCL-204ENST00000472585 NFKBIAP25963 317 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 RPL10P27635 214 aaKnown RBP9.15□□□□□ -0.94
VCL-204ENST00000472585 ARL4AP40617 200 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 DRG2P55039 364 aaKnown RBP9.15□□□□□ -0.94
VCL-204ENST00000472585 PER3P56645 1201 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 RPS15P62841 145 aaKnown RBP9.15□□□□□ -0.94
VCL-204ENST00000472585 GALNT2Q10471 571 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 GPR18Q14330 331 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 SEPT7Q16181 437 aaKnown RBP9.15□□□□□ -0.94
VCL-204ENST00000472585 UGT8Q16880 541 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 PLA2G4EQ3MJ16 856 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.15□□□□□ -0.94
VCL-204ENST00000472585 PRAMEF17Q5VTA0 474 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 CACHD1Q5VU97 1274 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 NCBP2-AS2Q69YL0 99 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 SP5Q6BEB4 398 aaPredicted RBP9.15□□□□□ -0.94
VCL-204ENST00000472585 ABRAXAS1Q6UWZ7 409 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 PRSS42Q7Z5A4 293 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 MCEMP1Q8IX19 187 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 IQCKQ8N0W5 287 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 CNTD1Q8N815 330 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 LPCAT1Q8NF37 534 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 ADAMTS17Q8TE56 1095 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 PNPLA2Q96AD5 504 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 ZNF653Q96CK0 615 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 POLR1EQ9GZS1 481 aaKnown RBP9.15□□□□□ -0.94
VCL-204ENST00000472585 EPB41L1Q9H4G0 881 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 PCDH9Q9HC56 1237 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 TRIM39Q9HCM9 518 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 TRIM10Q9UDY6 481 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 EPHA6Q9UF33 1036 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 DNAJC16Q9Y2G8 782 aa9.15□□□□□ -0.94
VCL-204ENST00000472585 PCSK5Q92824 1860 aa9.15□□□□□ -0.95
VCL-204ENST00000472585 MDC1Q14676 2089 aaKnown RBP9.14□□□□□ -0.95
VCL-204ENST00000472585 CROCCQ5TZA2 2017 aa9.14□□□□□ -0.95
VCL-204ENST00000472585 PCNX1Q96RV3 2341 aa9.14□□□□□ -0.95
VCL-204ENST00000472585 AURKAO14965 403 aa9.14□□□□□ -0.95
VCL-204ENST00000472585 CEACAM4O75871 244 aa9.14□□□□□ -0.95
VCL-204ENST00000472585 RASSF9O75901 435 aa9.14□□□□□ -0.95
VCL-204ENST00000472585 VIPP01282 170 aa9.14□□□□□ -0.95
VCL-204ENST00000472585 PIRTP0C851 137 aa9.14□□□□□ -0.95
VCL-204ENST00000472585 ZNF7P17097 686 aaPredicted RBP9.14□□□□□ -0.95
VCL-204ENST00000472585 AMD1P17707 334 aa9.14□□□□□ -0.95
VCL-204ENST00000472585 CAPZBP47756 277 aa9.14□□□□□ -0.95
VCL-204ENST00000472585 GCGRP47871 477 aa9.14□□□□□ -0.95
VCL-204ENST00000472585 EPHB1P54762 984 aa9.14□□□□□ -0.95
VCL-204ENST00000472585 PAFAH1B3Q15102 231 aaKnown RBP9.14□□□□□ -0.95
VCL-204ENST00000472585 TDRD12Q587J7 1177 aaKnown RBP9.14□□□□□ -0.95
VCL-204ENST00000472585 ANKRD20A8PQ5CZ79 823 aa9.14□□□□□ -0.95
VCL-204ENST00000472585 ALS2CLQ60I27 953 aa9.14□□□□□ -0.95
VCL-204ENST00000472585 SLC6A19Q695T7 634 aa9.14□□□□□ -0.95
VCL-204ENST00000472585 CYB5D1Q6P9G0 228 aa9.14□□□□□ -0.95
VCL-204ENST00000472585 CRTC3Q6UUV7 619 aa9.14□□□□□ -0.95
VCL-204ENST00000472585 ZNF517Q6ZMY9 492 aaPredicted RBP9.14□□□□□ -0.95
VCL-204ENST00000472585 RBM43Q6ZSC3 357 aaKnown RBP9.14□□□□□ -0.95
VCL-204ENST00000472585 RAVER1Q8IY67 606 aaKnown RBP9.14□□□□□ -0.95
VCL-204ENST00000472585 BBS5Q8N3I7 341 aa9.14□□□□□ -0.95
VCL-204ENST00000472585 PQLC3Q8N755 202 aa9.14□□□□□ -0.95
VCL-204ENST00000472585 RBMXL3Q8N7X1 1067 aaKnown RBP9.14□□□□□ -0.95
VCL-204ENST00000472585 SLC41A2Q96JW4 573 aa9.14□□□□□ -0.95
VCL-204ENST00000472585 PPM1MQ96MI6 270 aa9.14□□□□□ -0.95
VCL-204ENST00000472585 TSGA13Q96PP4 275 aa9.14□□□□□ -0.95
VCL-204ENST00000472585 TRIB3Q96RU7 358 aa9.14□□□□□ -0.95
VCL-204ENST00000472585 GPR87Q9BY21 358 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms