RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 FRG1Q14331 258 aaKnown RBP4.21□□□□□ -1.74
CD46-213ENST00000471987 SDCCAG8Q86SQ7 713 aaPredicted RBP4.21□□□□□ -1.74
CD46-213ENST00000471987 ZNF440Q8IYI8 595 aa4.21□□□□□ -1.74
CD46-213ENST00000471987 GCSAMQ8N6F7 178 aa4.21□□□□□ -1.74
CD46-213ENST00000471987 PPHLN1Q8NEY8 458 aaKnown RBP4.21□□□□□ -1.74
CD46-213ENST00000471987 MAP7D2Q96T17 732 aa4.21□□□□□ -1.74
CD46-213ENST00000471987 TRIM51Q9BSJ1 452 aa4.21□□□□□ -1.74
CD46-213ENST00000471987 CDK19Q9BWU1 502 aa4.21□□□□□ -1.74
CD46-213ENST00000471987 PIGMQ9H3S5 423 aa4.21□□□□□ -1.74
CD46-213ENST00000471987 RANGRFQ9HD47 186 aaPredicted RBP4.21□□□□□ -1.74
CD46-213ENST00000471987 SIX2Q9NPC8 291 aa4.21□□□□□ -1.74
CD46-213ENST00000471987 ECHDC1Q9NTX5 307 aa4.21□□□□□ -1.74
CD46-213ENST00000471987 TAS2R10Q9NYW0 307 aa4.21□□□□□ -1.74
CD46-213ENST00000471987 FBXW11Q9UKB1 542 aa4.21□□□□□ -1.74
CD46-213ENST00000471987 ARHGAP26Q9UNA1 814 aa4.21□□□□□ -1.74
CD46-213ENST00000471987 NAALADL1Q9UQQ1 740 aa4.21□□□□□ -1.74
CD46-213ENST00000471987 FLT1P17948 1338 aa4.21□□□□□ -1.74
CD46-213ENST00000471987 MEIOCA2RUB1 952 aa4.2□□□□□ -1.74
CD46-213ENST00000471987 MAGEB17A8MXT2 336 aa4.2□□□□□ -1.74
CD46-213ENST00000471987 DAB1O75553 588 aa4.2□□□□□ -1.74
CD46-213ENST00000471987 EML2O95834 649 aa4.2□□□□□ -1.74
CD46-213ENST00000471987 ICAM1P05362 532 aa4.2□□□□□ -1.74
CD46-213ENST00000471987 HARS2P49590 506 aaKnown RBP4.2□□□□□ -1.74
CD46-213ENST00000471987 RPL7AP62424 266 aaKnown RBP4.2□□□□□ -1.74
CD46-213ENST00000471987 OLR1P78380 273 aa4.2□□□□□ -1.74
CD46-213ENST00000471987 IRX6P78412 446 aaPredicted RBP4.2□□□□□ -1.74
CD46-213ENST00000471987 ADIPOQQ15848 244 aa4.2□□□□□ -1.74
CD46-213ENST00000471987 TCTE1Q5JU00 501 aa4.2□□□□□ -1.74
CD46-213ENST00000471987 FFAR4Q5NUL3 377 aa4.2□□□□□ -1.74
CD46-213ENST00000471987 NDUFAF5Q5TEU4 345 aa4.2□□□□□ -1.74
CD46-213ENST00000471987 RASGEF1CQ8N431 466 aa4.2□□□□□ -1.74
CD46-213ENST00000471987 C1orf52Q8N6N3 182 aaKnown RBP4.2□□□□□ -1.74
CD46-213ENST00000471987 PIP5K1AQ99755 562 aa4.2□□□□□ -1.74
CD46-213ENST00000471987 MCRIP2Q9BUT9 160 aaKnown RBP4.2□□□□□ -1.74
CD46-213ENST00000471987 WASH6PQ9NQA3 447 aa4.2□□□□□ -1.74
CD46-213ENST00000471987 TMEM184BQ9Y519 407 aaPredicted RBP4.2□□□□□ -1.74
CD46-213ENST00000471987 H7C423 109 aa4.19□□□□□ -1.74
CD46-213ENST00000471987 PLOD2O00469 737 aa4.19□□□□□ -1.74
CD46-213ENST00000471987 SLC22A2O15244 555 aa4.19□□□□□ -1.74
CD46-213ENST00000471987 DCXO43602 365 aa4.19□□□□□ -1.74
CD46-213ENST00000471987 IPO7O95373 1038 aaKnown RBP4.19□□□□□ -1.74
CD46-213ENST00000471987 MAPK9P45984 424 aa4.19□□□□□ -1.74
CD46-213ENST00000471987 DSCR10P59022 87 aa4.19□□□□□ -1.74
CD46-213ENST00000471987 CSTF3Q12996 717 aaKnown RBP4.19□□□□□ -1.74
CD46-213ENST00000471987 ALS2CLQ60I27 953 aa4.19□□□□□ -1.74
CD46-213ENST00000471987 METTL7BQ6UX53 244 aa4.19□□□□□ -1.74
CD46-213ENST00000471987 SEPT14Q6ZU15 432 aa4.19□□□□□ -1.74
CD46-213ENST00000471987 PTOV1Q86YD1 416 aa4.19□□□□□ -1.74
CD46-213ENST00000471987 SPAG16Q8N0X2 631 aa4.19□□□□□ -1.74
CD46-213ENST00000471987 CNTROBQ8N137 903 aa4.19□□□□□ -1.74
CD46-213ENST00000471987 SMPDL3BQ92485 455 aa4.19□□□□□ -1.74
CD46-213ENST00000471987 SGCDQ92629 289 aa4.19□□□□□ -1.74
CD46-213ENST00000471987 INTS12Q96CB8 462 aaKnown RBP4.19□□□□□ -1.74
CD46-213ENST00000471987 SEPT5Q99719 369 aaPredicted RBP4.19□□□□□ -1.74
CD46-213ENST00000471987 RHNO1Q9BSD3 238 aa4.19□□□□□ -1.74
CD46-213ENST00000471987 PAIP1Q9H074 479 aaKnown RBP4.19□□□□□ -1.74
CD46-213ENST00000471987 SCPEP1Q9HB40 452 aa4.19□□□□□ -1.74
CD46-213ENST00000471987 PTTG2Q9NZH5 202 aa4.19□□□□□ -1.74
CD46-213ENST00000471987 SLCO1B7G3V0H7 640 aa4.18□□□□□ -1.74
CD46-213ENST00000471987 MAP2K7O14733 419 aa4.18□□□□□ -1.74
CD46-213ENST00000471987 SORBS2O94875 1100 aaKnown RBP4.18□□□□□ -1.74
CD46-213ENST00000471987 FAM157CP0CG43 387 aa4.18□□□□□ -1.74
CD46-213ENST00000471987 UBL4AP11441 157 aa4.18□□□□□ -1.74
CD46-213ENST00000471987 PPM1FP49593 454 aaPredicted RBP4.18□□□□□ -1.74
CD46-213ENST00000471987 MMP15P51511 669 aa4.18□□□□□ -1.74
CD46-213ENST00000471987 BMXP51813 675 aa4.18□□□□□ -1.74
CD46-213ENST00000471987 TAS2R40P59535 323 aa4.18□□□□□ -1.74
CD46-213ENST00000471987 MRPS5P82675 430 aaKnown RBP4.18□□□□□ -1.74
CD46-213ENST00000471987 TMEM115Q12893 351 aaPredicted RBP4.18□□□□□ -1.74
CD46-213ENST00000471987 SOWAHCQ53LP3 525 aaPredicted RBP4.18□□□□□ -1.74
CD46-213ENST00000471987 ZNF354CQ86Y25 554 aa4.18□□□□□ -1.74
CD46-213ENST00000471987 RNF168Q8IYW5 571 aaPredicted RBP4.18□□□□□ -1.74
CD46-213ENST00000471987 ESX1Q8N693 406 aa4.18□□□□□ -1.74
CD46-213ENST00000471987 MOCOSQ96EN8 888 aa4.18□□□□□ -1.74
CD46-213ENST00000471987 GMPPAQ96IJ6 420 aaPredicted RBP4.18□□□□□ -1.74
CD46-213ENST00000471987 EGLN2Q96KS0 407 aa4.18□□□□□ -1.74
CD46-213ENST00000471987 RBM4BQ9BQ04 359 aaKnown RBP4.18□□□□□ -1.74
CD46-213ENST00000471987 EPB41L5Q9HCM4 733 aa4.18□□□□□ -1.74
CD46-213ENST00000471987 SLC7A10Q9NS82 523 aa4.18□□□□□ -1.74
CD46-213ENST00000471987 DNAJB4Q9UDY4 337 aa4.18□□□□□ -1.74
CD46-213ENST00000471987 PYGO1Q9Y3Y4 419 aa4.18□□□□□ -1.74
CD46-213ENST00000471987 LRRFIP2Q9Y608 721 aaKnown RBP4.18□□□□□ -1.74
CD46-213ENST00000471987 GPR137BO60478 399 aa4.17□□□□□ -1.74
CD46-213ENST00000471987 CSPG5O95196 566 aa4.17□□□□□ -1.74
CD46-213ENST00000471987 NADKO95544 446 aaPredicted RBP4.17□□□□□ -1.74
CD46-213ENST00000471987 TYMPP19971 482 aa4.17□□□□□ -1.74
CD46-213ENST00000471987 ICAM3P32942 547 aa4.17□□□□□ -1.74
CD46-213ENST00000471987 ADAMTSL4-AS1Q5T5F5 129 aa4.17□□□□□ -1.74
CD46-213ENST00000471987 FASTKD5Q7L8L6 764 aaKnown RBP4.17□□□□□ -1.74
CD46-213ENST00000471987 SH2D6Q7Z4S9 175 aa4.17□□□□□ -1.74
CD46-213ENST00000471987 ISCA2Q86U28 154 aa4.17□□□□□ -1.74
CD46-213ENST00000471987 CCDC190Q86UF4 302 aa4.17□□□□□ -1.74
CD46-213ENST00000471987 OR2T12Q8NG77 320 aa4.17□□□□□ -1.74
CD46-213ENST00000471987 OR2T6Q8NHC8 308 aa4.17□□□□□ -1.74
CD46-213ENST00000471987 FGFBP3Q8TAT2 258 aa4.17□□□□□ -1.74
CD46-213ENST00000471987 METTL6Q8TCB7 284 aa4.17□□□□□ -1.74
CD46-213ENST00000471987 MRGPRDQ8TDS7 321 aa4.17□□□□□ -1.74
CD46-213ENST00000471987 VGLL1Q99990 258 aa4.17□□□□□ -1.74
CD46-213ENST00000471987 ATAD3AQ9NVI7 634 aa4.17□□□□□ -1.74
CD46-213ENST00000471987 COQ3Q9NZJ6 369 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms