RNA–Protein interactions for RNA: ENST00000471364.1

RUBCN-208, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

TSL 3

Gene RUBCN, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-208ENST00000471364 CFHR1Q03591 330 aa12.6□□□□□ -0.39
RUBCN-208ENST00000471364 PDE1CQ14123 709 aaPredicted RBP12.6□□□□□ -0.39
RUBCN-208ENST00000471364 SETMARQ53H47 684 aaPredicted RBP12.6□□□□□ -0.39
RUBCN-208ENST00000471364 INO80DQ53TQ3 878 aaPredicted RBP12.6□□□□□ -0.39
RUBCN-208ENST00000471364 BROXQ5VW32 411 aa12.6□□□□□ -0.39
RUBCN-208ENST00000471364 NLRP9Q7RTR0 991 aa12.6□□□□□ -0.39
RUBCN-208ENST00000471364 CACNA2D3Q8IZS8 1091 aa12.6□□□□□ -0.39
RUBCN-208ENST00000471364 ZNF248Q8NDW4 579 aa12.6□□□□□ -0.39
RUBCN-208ENST00000471364 FAM131CQ96AQ9 280 aa12.6□□□□□ -0.39
RUBCN-208ENST00000471364 KLHDC7BQ96G42 594 aa12.6□□□□□ -0.39
RUBCN-208ENST00000471364 ATXN7L3BQ96GX2 97 aa12.6□□□□□ -0.39
RUBCN-208ENST00000471364 VPS39Q96JC1 886 aa12.6□□□□□ -0.39
RUBCN-208ENST00000471364 FAM167BQ9BTA0 163 aa12.6□□□□□ -0.39
RUBCN-208ENST00000471364 TDRD1Q9BXT4 1180 aaKnown RBP12.6□□□□□ -0.39
RUBCN-208ENST00000471364 ASH1LQ9NR48 2969 aaKnown RBP12.6□□□□□ -0.39
RUBCN-208ENST00000471364 SNX15Q9NRS6 342 aa12.6□□□□□ -0.39
RUBCN-208ENST00000471364 C1QTNF3-AMACRE9PGA6 284 aa12.59□□□□□ -0.39
RUBCN-208ENST00000471364 LDB2O43679 373 aa12.59□□□□□ -0.39
RUBCN-208ENST00000471364 SIGLEC6O43699 453 aa12.59□□□□□ -0.39
RUBCN-208ENST00000471364 SNX3O60493 162 aa12.59□□□□□ -0.39
RUBCN-208ENST00000471364 RNGTTO60942 597 aaKnown RBP12.59□□□□□ -0.39
RUBCN-208ENST00000471364 GLRA3O75311 464 aa12.59□□□□□ -0.39
RUBCN-208ENST00000471364 PRLP01236 227 aa12.59□□□□□ -0.39
RUBCN-208ENST00000471364 PRKCGP05129 697 aa12.59□□□□□ -0.39
RUBCN-208ENST00000471364 GABRB3P28472 473 aa12.59□□□□□ -0.39
RUBCN-208ENST00000471364 TYK2P29597 1187 aa12.59□□□□□ -0.39
RUBCN-208ENST00000471364 SLC1A2P43004 574 aa12.59□□□□□ -0.39
RUBCN-208ENST00000471364 PLK1P53350 603 aa12.59□□□□□ -0.39
RUBCN-208ENST00000471364 METAP1P53582 386 aa12.59□□□□□ -0.39
RUBCN-208ENST00000471364 UCNP55089 124 aa12.59□□□□□ -0.39
RUBCN-208ENST00000471364 PCBP4P57723 403 aaKnown RBP12.59□□□□□ -0.39
RUBCN-208ENST00000471364 RHOAP61586 193 aa12.59□□□□□ -0.39
RUBCN-208ENST00000471364 SF3A3Q12874 501 aaKnown RBP eCLIP12.59□□□□□ -0.39
RUBCN-208ENST00000471364 THOC5Q13769 683 aaKnown RBP12.59□□□□□ -0.39
RUBCN-208ENST00000471364 GRM3Q14832 879 aa12.59□□□□□ -0.39
RUBCN-208ENST00000471364 ACCSLQ4AC99 568 aa12.59□□□□□ -0.39
RUBCN-208ENST00000471364 TAF1BQ53T94 588 aaPredicted RBP12.59□□□□□ -0.39
RUBCN-208ENST00000471364 C6orf89Q6UWU4 347 aa12.59□□□□□ -0.39
RUBCN-208ENST00000471364 FAM47EQ6ZV65 393 aa12.59□□□□□ -0.39
RUBCN-208ENST00000471364 CMC1Q7Z7K0 106 aa12.59□□□□□ -0.39
RUBCN-208ENST00000471364 ZC3HC1Q86WB0 502 aaKnown RBP12.59□□□□□ -0.39
RUBCN-208ENST00000471364 DENND6AQ8IWF6 608 aa12.59□□□□□ -0.39
RUBCN-208ENST00000471364 CCDC197Q8NCU1 140 aa12.59□□□□□ -0.39
RUBCN-208ENST00000471364 C2CD4AQ8NCU7 369 aaPredicted RBP12.59□□□□□ -0.39
RUBCN-208ENST00000471364 ARMC2Q8NEN0 867 aa12.59□□□□□ -0.39
RUBCN-208ENST00000471364 ACVR1CQ8NER5 493 aa12.59□□□□□ -0.39
RUBCN-208ENST00000471364 OR13J1Q8NGT2 312 aa12.59□□□□□ -0.39
RUBCN-208ENST00000471364 ZNF578Q96N58 590 aaPredicted RBP12.59□□□□□ -0.39
RUBCN-208ENST00000471364 GPR22Q99680 433 aa12.59□□□□□ -0.39
RUBCN-208ENST00000471364 RHOJQ9H4E5 214 aa12.59□□□□□ -0.39
RUBCN-208ENST00000471364 SLC25A13Q9UJS0 675 aa12.59□□□□□ -0.39
RUBCN-208ENST00000471364 EMCNQ9ULC0 261 aa12.59□□□□□ -0.39
RUBCN-208ENST00000471364 CHKBQ9Y259 395 aa12.59□□□□□ -0.39
RUBCN-208ENST00000471364 FCF1Q9Y324 198 aaKnown RBP12.59□□□□□ -0.39
RUBCN-208ENST00000471364 KCTD3Q9Y597 815 aa12.59□□□□□ -0.39
RUBCN-208ENST00000471364 TRPM6Q9BX84 2022 aa12.59□□□□□ -0.39
RUBCN-208ENST00000471364 TRIM38O00635 465 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 EDF1O60869 148 aaKnown RBP12.58□□□□□ -0.4
RUBCN-208ENST00000471364 FLNBO75369 2602 aaKnown RBP12.58□□□□□ -0.4
RUBCN-208ENST00000471364 AHSGP02765 367 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 MPOP05164 745 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 GMPRP36959 345 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 CSRP3P50461 194 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 VASPP50552 380 aaPredicted RBP12.58□□□□□ -0.4
RUBCN-208ENST00000471364 TMPRSS3P57727 454 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 ACVR1Q04771 509 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 NSUN2Q08J23 767 aaKnown RBP eCLIP12.58□□□□□ -0.4
RUBCN-208ENST00000471364 CNTN1Q12860 1018 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 TRAF2Q12933 501 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 CTBP1Q13363 440 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 LAMB3Q13751 1172 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 ITIH4Q14624 930 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 UGP2Q16851 508 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 AGBL4Q5VU57 503 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 RETSATQ6NUM9 610 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 NEPROQ6NW34 567 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 C16orf46Q6P387 395 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 SRLQ86TD4 932 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 LSMEM2Q8N112 164 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 OR4C6Q8NH72 309 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 BLOC1S5Q8TDH9 187 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 FRS2Q8WU20 508 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 CABS1Q96KC9 395 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 DEPDC7Q96QD5 511 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 C2orf49Q9BVC5 232 aaPredicted RBP12.58□□□□□ -0.4
RUBCN-208ENST00000471364 PITPNM3Q9BZ71 974 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 MANSC1Q9H8J5 431 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 CAB39LQ9H9S4 337 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 PREBQ9HCU5 417 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.58□□□□□ -0.4
RUBCN-208ENST00000471364 DCDC2Q9UHG0 476 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 SARDHQ9UL12 918 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 RIMKLBQ9ULI2 386 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 PHTF1Q9UMS5 762 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 SPO11Q9Y5K1 396 aa12.58□□□□□ -0.4
RUBCN-208ENST00000471364 MGAQ8IWI9 3026 aa12.57□□□□□ -0.4
RUBCN-208ENST00000471364 COL6A6A6NMZ7 2263 aa12.57□□□□□ -0.4
RUBCN-208ENST00000471364 J3QKU1 62 aa12.57□□□□□ -0.4
RUBCN-208ENST00000471364 CCL22O00626 93 aa12.57□□□□□ -0.4
RUBCN-208ENST00000471364 MT-CO1P00395 513 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms