RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 ZNF711Q9Y462 761 aa13.63□□□□□ -0.23
SEMA3F-208ENST00000470737 USP9YO00507 2555 aaPredicted RBP13.63□□□□□ -0.23
SEMA3F-208ENST00000470737 A0A087X0T9 212 aa13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 GOLGA6L3A6NEY3 463 aa13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 OR52A4PA6NMU1 304 aa13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 TTLL8A6PVC2 850 aa13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 K7EM74 188 aa13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 KIF1CO43896 1103 aaKnown RBP13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 PROSCO94903 275 aa13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 PIRTP0C851 137 aa13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 FAM228BP0C875 321 aa13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 NELFEP18615 380 aaKnown RBP13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 DRG2P55039 364 aaKnown RBP13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 IFI35P80217 286 aaPredicted RBP13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 PPIDQ08752 370 aaKnown RBP13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 SLC10A2Q12908 348 aaPredicted RBP13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 TUBB3Q13509 450 aa13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 GPR18Q14330 331 aa13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 PCSK7Q16549 785 aa13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 AGAP9Q5VTM2 703 aa13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 WASH2PQ6VEQ5 465 aa13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 TMC3Q7Z5M5 1100 aa13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 LURAP1LQ8IV03 231 aa13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 VSTM4Q8IW00 320 aa13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 APLFQ8IW19 511 aaPredicted RBP13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 PQLC3Q8N755 202 aa13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 CT55Q8WUE5 264 aa13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 KLHL6Q8WZ60 621 aa13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 UBXN4Q92575 508 aa13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 FAF2Q96CS3 445 aa13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 PSMG3-AS1Q96PY0 264 aa13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 DNAJC7Q99615 494 aa13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 RAB33BQ9H082 229 aa13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 SLC40A1Q9NP59 571 aa13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 WASH6PQ9NQA3 447 aa13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 UVRAGQ9P2Y5 699 aa13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 TRIM10Q9UDY6 481 aa13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 HEY1Q9Y5J3 304 aa13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 SPTAN1Q13813 2472 aaKnown RBP13.62□□□□□ -0.23
SEMA3F-208ENST00000470737 KCNJ13O60928 360 aa13.61□□□□□ -0.23
SEMA3F-208ENST00000470737 MTX2O75431 263 aa13.61□□□□□ -0.23
SEMA3F-208ENST00000470737 AGFG2O95081 481 aa13.61□□□□□ -0.23
SEMA3F-208ENST00000470737 TNNT3P45378 269 aaPredicted RBP13.61□□□□□ -0.23
SEMA3F-208ENST00000470737 TAS2R40P59535 323 aa13.61□□□□□ -0.23
SEMA3F-208ENST00000470737 RPS15P62841 145 aaKnown RBP13.61□□□□□ -0.23
SEMA3F-208ENST00000470737 PDE1BQ01064 536 aa13.61□□□□□ -0.23
SEMA3F-208ENST00000470737 ACY1Q03154 408 aa13.61□□□□□ -0.23
SEMA3F-208ENST00000470737 CDK18Q07002 472 aa13.61□□□□□ -0.23
SEMA3F-208ENST00000470737 ZBTB17Q13105 803 aa13.61□□□□□ -0.23
SEMA3F-208ENST00000470737 PLCL1Q15111 1095 aa13.61□□□□□ -0.23
SEMA3F-208ENST00000470737 FHL5Q5TD97 284 aa13.61□□□□□ -0.23
SEMA3F-208ENST00000470737 TMEM135Q86UB9 458 aa13.61□□□□□ -0.23
SEMA3F-208ENST00000470737 BPHLQ86WA6 291 aaPredicted RBP13.61□□□□□ -0.23
SEMA3F-208ENST00000470737 CNTD1Q8N815 330 aa13.61□□□□□ -0.23
SEMA3F-208ENST00000470737 RNF214Q8ND24 703 aa13.61□□□□□ -0.23
SEMA3F-208ENST00000470737 OR8K1Q8NGG5 319 aa13.61□□□□□ -0.23
SEMA3F-208ENST00000470737 BRSK1Q8TDC3 778 aa13.61□□□□□ -0.23
SEMA3F-208ENST00000470737 CTNNBL1Q8WYA6 563 aaPredicted RBP13.61□□□□□ -0.23
SEMA3F-208ENST00000470737 EID2BQ96D98 161 aa13.61□□□□□ -0.23
SEMA3F-208ENST00000470737 AGAP3Q96P47 875 aa13.61□□□□□ -0.23
SEMA3F-208ENST00000470737 FCRL4Q96PJ5 515 aa13.61□□□□□ -0.23
SEMA3F-208ENST00000470737 RNF157Q96PX1 679 aa13.61□□□□□ -0.23
SEMA3F-208ENST00000470737 VPS35Q96QK1 796 aa13.61□□□□□ -0.23
SEMA3F-208ENST00000470737 TRIB3Q96RU7 358 aa13.61□□□□□ -0.23
SEMA3F-208ENST00000470737 MAK16Q9BXY0 300 aaKnown RBP13.61□□□□□ -0.23
SEMA3F-208ENST00000470737 CEP41Q9BYV8 373 aa13.61□□□□□ -0.23
SEMA3F-208ENST00000470737 ZCCHC2Q9C0B9 1178 aaKnown RBP13.61□□□□□ -0.23
SEMA3F-208ENST00000470737 BRD8Q9H0E9 1235 aa13.61□□□□□ -0.23
SEMA3F-208ENST00000470737 ACTL8Q9H568 366 aa13.61□□□□□ -0.23
SEMA3F-208ENST00000470737 TNRC6AQ8NDV7 1962 aaKnown RBP13.61□□□□□ -0.23
SEMA3F-208ENST00000470737 NBPF19A0A087WUL8 3843 aa13.61□□□□□ -0.23
SEMA3F-208ENST00000470737 ICE1Q9Y2F5 2266 aa13.6□□□□□ -0.23
SEMA3F-208ENST00000470737 PPP1R12AO14974 1030 aaPredicted RBP13.6□□□□□ -0.23
SEMA3F-208ENST00000470737 H2AFZP0C0S5 128 aa13.6□□□□□ -0.23
SEMA3F-208ENST00000470737 BRAFP15056 766 aa13.6□□□□□ -0.23
SEMA3F-208ENST00000470737 BPIP17213 487 aa13.6□□□□□ -0.23
SEMA3F-208ENST00000470737 KDELR1P24390 212 aa13.6□□□□□ -0.23
SEMA3F-208ENST00000470737 PGDP52209 483 aa13.6□□□□□ -0.23
SEMA3F-208ENST00000470737 TMEM115Q12893 351 aaPredicted RBP13.6□□□□□ -0.23
SEMA3F-208ENST00000470737 SEMA5AQ13591 1074 aa13.6□□□□□ -0.23
SEMA3F-208ENST00000470737 PDK1Q15118 436 aa13.6□□□□□ -0.23
SEMA3F-208ENST00000470737 ODF2Q5BJF6 829 aa13.6□□□□□ -0.23
SEMA3F-208ENST00000470737 H2AFVQ71UI9 128 aa13.6□□□□□ -0.23
SEMA3F-208ENST00000470737 CPNE8Q86YQ8 564 aa13.6□□□□□ -0.23
SEMA3F-208ENST00000470737 CPT1CQ8TCG5 803 aa13.6□□□□□ -0.23
SEMA3F-208ENST00000470737 CPLX3Q8WVH0 158 aa13.6□□□□□ -0.23
SEMA3F-208ENST00000470737 THAP4Q8WY91 577 aa13.6□□□□□ -0.23
SEMA3F-208ENST00000470737 IMP4Q96G21 291 aaKnown RBP13.6□□□□□ -0.23
SEMA3F-208ENST00000470737 SLC25A23Q9BV35 468 aa13.6□□□□□ -0.23
SEMA3F-208ENST00000470737 GPR87Q9BY21 358 aa13.6□□□□□ -0.23
SEMA3F-208ENST00000470737 SLC25A51Q9H1U9 297 aa13.6□□□□□ -0.23
SEMA3F-208ENST00000470737 BPIFA1Q9NP55 256 aa13.6□□□□□ -0.23
SEMA3F-208ENST00000470737 ACSS2Q9NR19 701 aa13.6□□□□□ -0.23
SEMA3F-208ENST00000470737 G3BP2Q9UN86 482 aaKnown RBP13.6□□□□□ -0.23
SEMA3F-208ENST00000470737 SPENQ96T58 3664 aaKnown RBP13.59□□□□□ -0.23
SEMA3F-208ENST00000470737 USP9XQ93008 2570 aaPredicted RBP13.59□□□□□ -0.23
SEMA3F-208ENST00000470737 UBA6A0AVT1 1052 aaPredicted RBP13.59□□□□□ -0.23
SEMA3F-208ENST00000470737 LRRD1A4D1F6 860 aa13.59□□□□□ -0.23
SEMA3F-208ENST00000470737 APOL1O14791 398 aa13.59□□□□□ -0.23
SEMA3F-208ENST00000470737 DNAJB5O75953 348 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms