RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 GOLGA8SH3BPF8 625 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 NPC1O15118 1278 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 MOSPD3O75425 235 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 RNF8O76064 485 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 MOCS2O96007 188 aaPredicted RBP6.37□□□□□ -1.39
PTCD3-208ENST00000469585 ZDHHC11BP0C7U3 371 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 MYBL1P10243 752 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 TPH1P17752 444 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 TGM1P22735 817 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 FCARP24071 287 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 AVPR2P30518 371 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 SDC4P31431 198 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 GPD2P43304 727 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 RPS9P46781 194 aaKnown RBP6.37□□□□□ -1.39
PTCD3-208ENST00000469585 NXPH1P58417 271 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 ST8SIA6P61647 398 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 ZBED6P86452 979 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 NME3Q13232 169 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 CDH18Q13634 790 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 BYSLQ13895 437 aaKnown RBP6.37□□□□□ -1.39
PTCD3-208ENST00000469585 STARD3Q14849 445 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 PON2Q15165 354 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 CACHD1Q5VU97 1274 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 NAA35Q5VZE5 725 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 KIAA0895LQ68EN5 471 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 DENND1BQ6P3S1 775 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 DNAJC24Q6P3W2 148 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 Q6YL49 198 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 Q6ZPA2 131 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 TPGS1Q6ZTW0 290 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 TMEM150AQ86TG1 271 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 TMEM110Q86TL2 294 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 DTX2Q86UW9 622 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 VRK3Q8IV63 474 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 SLC15A3Q8IY34 581 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 HJURPQ8NCD3 748 aaPredicted RBP6.37□□□□□ -1.39
PTCD3-208ENST00000469585 LINC00476Q8WZB0 136 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 ATOH1Q92858 354 aaPredicted RBP6.37□□□□□ -1.39
PTCD3-208ENST00000469585 TMA16Q96EY4 203 aaKnown RBP6.37□□□□□ -1.39
PTCD3-208ENST00000469585 LRRC46Q96FV0 321 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 BTN2A3PQ96KV6 586 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 PLA2G2FQ9BZM2 168 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 FAM83DQ9H4H8 585 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 LMAN1LQ9HAT1 526 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 ARFGAP3Q9NP61 516 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 LTB4R2Q9NPC1 389 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 SIX2Q9NPC8 291 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 DNAJC17Q9NVM6 304 aaKnown RBP6.37□□□□□ -1.39
PTCD3-208ENST00000469585 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.37□□□□□ -1.39
PTCD3-208ENST00000469585 COX16Q9P0S2 106 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 BCCIPQ9P287 314 aaKnown RBP eCLIP6.37□□□□□ -1.39
PTCD3-208ENST00000469585 PLA2G4CQ9UP65 541 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 CCL26Q9Y258 94 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 MAN2B2Q9Y2E5 1009 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 COL6A3P12111 3177 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 ITIH6Q6UXX5 1313 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 GRID2IPA4D2P6 1211 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 LRRC53A6NM62 1247 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 YJEFN3A6XGL0 299 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 VWC2LB2RUY7 222 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 E7ENQ6 273 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 H0Y626 953 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 YY2O15391 372 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 TIMM44O43615 452 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 SYNCRIPO60506 623 aaKnown RBP6.36□□□□□ -1.39
PTCD3-208ENST00000469585 DAB1O75553 588 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 OLFM2O95897 454 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 SERPING1P05155 500 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 ATP5BP06576 529 aaKnown RBP6.36□□□□□ -1.39
PTCD3-208ENST00000469585 DCNP07585 359 aaKnown RBP6.36□□□□□ -1.39
PTCD3-208ENST00000469585 PDHA1P08559 390 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 KRT3P12035 628 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 ARSAP15289 507 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 PDGFRAP16234 1089 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 MATKP42679 507 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 CXCL12P48061 93 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 SULT1E1P49888 294 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 PRKAG1P54619 331 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 DEUP1Q05D60 604 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 EOGTQ5NDL2 527 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 BRMS1LQ5PSV4 323 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 C10orf62Q5T681 223 aaPredicted RBP6.36□□□□□ -1.39
PTCD3-208ENST00000469585 MSANTD2Q6P1R3 559 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 ZNF627Q7L945 461 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 SLC26A9Q7LBE3 791 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 ANKS1BQ7Z6G8 1248 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 GGNQ86UU5 652 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 CHSY1Q86X52 802 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 DNAJB14Q8TBM8 379 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 WFIKKN2Q8TEU8 576 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 ATG4AQ8WYN0 398 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 SYN2Q92777 582 aaPredicted RBP6.36□□□□□ -1.39
PTCD3-208ENST00000469585 VCPIP1Q96JH7 1222 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 CCDC42Q96M95 316 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 COQ10AQ96MF6 247 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 SLC22A12Q96S37 553 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 CPXM1Q96SM3 734 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 AGPAT1Q99943 283 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 AIFM2Q9BRQ8 373 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 FUCA2Q9BTY2 467 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms