RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 DDX3YO15523 660 aaKnown RBP12.04□□□□□ -0.48
HDAC3-204ENST00000469207 BUD23O43709 281 aaKnown RBP12.04□□□□□ -0.48
HDAC3-204ENST00000469207 MTA2O94776 668 aa12.04□□□□□ -0.48
HDAC3-204ENST00000469207 NTRK1P04629 796 aa12.04□□□□□ -0.48
HDAC3-204ENST00000469207 H2AFZP0C0S5 128 aa12.04□□□□□ -0.48
HDAC3-204ENST00000469207 FGF5P12034 268 aa12.04□□□□□ -0.48
HDAC3-204ENST00000469207 IDSP22304 550 aa12.04□□□□□ -0.48
HDAC3-204ENST00000469207 RPS18P62269 152 aaKnown RBP12.04□□□□□ -0.48
HDAC3-204ENST00000469207 KLRB1Q12918 225 aa12.04□□□□□ -0.48
HDAC3-204ENST00000469207 SEPT6Q14141 434 aa12.04□□□□□ -0.48
HDAC3-204ENST00000469207 PTPRCAPQ14761 206 aa12.04□□□□□ -0.48
HDAC3-204ENST00000469207 SLC9A4Q6AI14 798 aa12.04□□□□□ -0.48
HDAC3-204ENST00000469207 FAM83HQ6ZRV2 1179 aaPredicted RBP12.04□□□□□ -0.48
HDAC3-204ENST00000469207 H2AFVQ71UI9 128 aa12.04□□□□□ -0.48
HDAC3-204ENST00000469207 TEX19Q8NA77 164 aa12.04□□□□□ -0.48
HDAC3-204ENST00000469207 GPR150Q8NGU9 434 aa12.04□□□□□ -0.48
HDAC3-204ENST00000469207 GDAP1Q8TB36 358 aa12.04□□□□□ -0.48
HDAC3-204ENST00000469207 SLC35G2Q8TBE7 412 aa12.04□□□□□ -0.48
HDAC3-204ENST00000469207 CT55Q8WUE5 264 aa12.04□□□□□ -0.48
HDAC3-204ENST00000469207 KLHL6Q8WZ60 621 aa12.04□□□□□ -0.48
HDAC3-204ENST00000469207 MIB2Q96AX9 1013 aa12.04□□□□□ -0.48
HDAC3-204ENST00000469207 CXorf40BQ96DE9 158 aa12.04□□□□□ -0.48
HDAC3-204ENST00000469207 TWSG1Q9GZX9 223 aa12.04□□□□□ -0.48
HDAC3-204ENST00000469207 SLC25A51Q9H1U9 297 aa12.04□□□□□ -0.48
HDAC3-204ENST00000469207 LHX9Q9NQ69 397 aa12.04□□□□□ -0.48
HDAC3-204ENST00000469207 HAUS2Q9NVX0 235 aa12.04□□□□□ -0.48
HDAC3-204ENST00000469207 IFNKQ9P0W0 207 aa12.04□□□□□ -0.48
HDAC3-204ENST00000469207 HYOU1Q9Y4L1 999 aa12.04□□□□□ -0.48
HDAC3-204ENST00000469207 CFAP20Q9Y6A4 193 aaKnown RBP12.04□□□□□ -0.48
HDAC3-204ENST00000469207 UTP20O75691 2785 aaKnown RBP12.03□□□□□ -0.48
HDAC3-204ENST00000469207 SYCE3A1L190 88 aa12.03□□□□□ -0.48
HDAC3-204ENST00000469207 BLACEA4D250 179 aa12.03□□□□□ -0.48
HDAC3-204ENST00000469207 APOL1O14791 398 aa12.03□□□□□ -0.48
HDAC3-204ENST00000469207 CREG1O75629 220 aa12.03□□□□□ -0.48
HDAC3-204ENST00000469207 POP7O75817 140 aaKnown RBP12.03□□□□□ -0.48
HDAC3-204ENST00000469207 CCNYL3P0C7X3 344 aa12.03□□□□□ -0.48
HDAC3-204ENST00000469207 NELFEP18615 380 aaKnown RBP12.03□□□□□ -0.48
HDAC3-204ENST00000469207 CD68P34810 354 aaPredicted RBP12.03□□□□□ -0.48
HDAC3-204ENST00000469207 CHRNA4P43681 627 aa12.03□□□□□ -0.48
HDAC3-204ENST00000469207 CAPZBP47756 277 aa12.03□□□□□ -0.48
HDAC3-204ENST00000469207 UQCRFS1P47985 274 aa12.03□□□□□ -0.48
HDAC3-204ENST00000469207 CTSCP53634 463 aa12.03□□□□□ -0.48
HDAC3-204ENST00000469207 DCDC1P59894 354 aa12.03□□□□□ -0.48
HDAC3-204ENST00000469207 CHAF1BQ13112 559 aa12.03□□□□□ -0.48
HDAC3-204ENST00000469207 DNASE1L3Q13609 305 aa12.03□□□□□ -0.48
HDAC3-204ENST00000469207 IL11RAQ14626 422 aa12.03□□□□□ -0.48
HDAC3-204ENST00000469207 ASTE1Q2TB18 679 aaPredicted RBP12.03□□□□□ -0.48
HDAC3-204ENST00000469207 CRTC2Q53ET0 693 aaPredicted RBP12.03□□□□□ -0.48
HDAC3-204ENST00000469207 TEX44Q53QW1 395 aa12.03□□□□□ -0.48
HDAC3-204ENST00000469207 PWWP2BQ6NUJ5 590 aa12.03□□□□□ -0.48
HDAC3-204ENST00000469207 FBXO38Q6PIJ6 1188 aa12.03□□□□□ -0.48
HDAC3-204ENST00000469207 ASB18Q6ZVZ8 466 aa12.03□□□□□ -0.48
HDAC3-204ENST00000469207 RFX6Q8HWS3 928 aa12.03□□□□□ -0.48
HDAC3-204ENST00000469207 TRAPPC5Q8IUR0 188 aa12.03□□□□□ -0.48
HDAC3-204ENST00000469207 TTC30BQ8N4P2 665 aa12.03□□□□□ -0.48
HDAC3-204ENST00000469207 SLC25A41Q8N5S1 370 aa12.03□□□□□ -0.48
HDAC3-204ENST00000469207 CTNNBL1Q8WYA6 563 aaPredicted RBP12.03□□□□□ -0.48
HDAC3-204ENST00000469207 ZNF830Q96NB3 372 aaPredicted RBP12.03□□□□□ -0.48
HDAC3-204ENST00000469207 OLFM3Q96PB7 478 aa12.03□□□□□ -0.48
HDAC3-204ENST00000469207 MAP3K3Q99759 626 aa12.03□□□□□ -0.48
HDAC3-204ENST00000469207 TIMM29Q9BSF4 260 aa12.03□□□□□ -0.48
HDAC3-204ENST00000469207 MAK16Q9BXY0 300 aaKnown RBP12.03□□□□□ -0.48
HDAC3-204ENST00000469207 GLOD4Q9HC38 313 aa12.03□□□□□ -0.48
HDAC3-204ENST00000469207 IL26Q9NPH9 171 aa12.03□□□□□ -0.48
HDAC3-204ENST00000469207 UVRAGQ9P2Y5 699 aa12.03□□□□□ -0.48
HDAC3-204ENST00000469207 PADI1Q9ULC6 663 aa12.03□□□□□ -0.48
HDAC3-204ENST00000469207 POLHQ9Y253 713 aa12.03□□□□□ -0.48
HDAC3-204ENST00000469207 KCTD3Q9Y597 815 aa12.03□□□□□ -0.48
HDAC3-204ENST00000469207 ZNF106Q9H2Y7 1883 aaKnown RBP12.03□□□□□ -0.48
HDAC3-204ENST00000469207 TNRC6AQ8NDV7 1962 aaKnown RBP12.03□□□□□ -0.48
HDAC3-204ENST00000469207 OR2AG2A6NM03 316 aa12.02□□□□□ -0.49
HDAC3-204ENST00000469207 GPR89AB7ZAQ6 455 aa12.02□□□□□ -0.49
HDAC3-204ENST00000469207 TOX3O15405 576 aaPredicted RBP12.02□□□□□ -0.49
HDAC3-204ENST00000469207 VEGFDO43915 354 aa12.02□□□□□ -0.49
HDAC3-204ENST00000469207 NDST3O95803 873 aa12.02□□□□□ -0.49
HDAC3-204ENST00000469207 EBLN1P0CF75 366 aa12.02□□□□□ -0.49
HDAC3-204ENST00000469207 GPR89BP0CG08 455 aa12.02□□□□□ -0.49
HDAC3-204ENST00000469207 GP1BBP13224 206 aa12.02□□□□□ -0.49
HDAC3-204ENST00000469207 PTPN3P26045 913 aa12.02□□□□□ -0.49
HDAC3-204ENST00000469207 ADCY2Q08462 1091 aa12.02□□□□□ -0.49
HDAC3-204ENST00000469207 NFE2L1Q14494 772 aa12.02□□□□□ -0.49
HDAC3-204ENST00000469207 CHRNA6Q15825 494 aa12.02□□□□□ -0.49
HDAC3-204ENST00000469207 PRAMEF17Q5VTA0 474 aa12.02□□□□□ -0.49
HDAC3-204ENST00000469207 FAM69BQ5VUD6 431 aa12.02□□□□□ -0.49
HDAC3-204ENST00000469207 TCTN3Q6NUS6 607 aa12.02□□□□□ -0.49
HDAC3-204ENST00000469207 TMEM220Q6QAJ8 160 aa12.02□□□□□ -0.49
HDAC3-204ENST00000469207 MFSD7Q6UXD7 560 aa12.02□□□□□ -0.49
HDAC3-204ENST00000469207 PRSS42Q7Z5A4 293 aa12.02□□□□□ -0.49
HDAC3-204ENST00000469207 PPP1R3BQ86XI6 285 aa12.02□□□□□ -0.49
HDAC3-204ENST00000469207 LURAP1LQ8IV03 231 aa12.02□□□□□ -0.49
HDAC3-204ENST00000469207 FAM26EQ8N5C1 309 aa12.02□□□□□ -0.49
HDAC3-204ENST00000469207 BEND7Q8N7W2 519 aaPredicted RBP12.02□□□□□ -0.49
HDAC3-204ENST00000469207 RASGEF1AQ8N9B8 481 aa12.02□□□□□ -0.49
HDAC3-204ENST00000469207 AVL9Q8NBF6 648 aa12.02□□□□□ -0.49
HDAC3-204ENST00000469207 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.02□□□□□ -0.49
HDAC3-204ENST00000469207 ZDHHC12Q96GR4 267 aa12.02□□□□□ -0.49
HDAC3-204ENST00000469207 PPM1MQ96MI6 270 aa12.02□□□□□ -0.49
HDAC3-204ENST00000469207 PSMG3-AS1Q96PY0 264 aa12.02□□□□□ -0.49
HDAC3-204ENST00000469207 POT1Q9NUX5 634 aa12.02□□□□□ -0.49
HDAC3-204ENST00000469207 GOLGA6L3A6NEY3 463 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms