RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 EML2O95834 649 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 SLC4A1P02730 911 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 PTMAP06454 111 aaKnown RBP11□□□□□ -0.65
COL4A6-205ENST00000468338 PSMA3P25788 255 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 CCKBRP32239 447 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 CA5AP35218 305 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 GPR3P46089 330 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 XIAPP98170 497 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 ZFP36L1Q07352 338 aaKnown RBP11□□□□□ -0.65
COL4A6-205ENST00000468338 TMEM115Q12893 351 aaPredicted RBP11□□□□□ -0.65
COL4A6-205ENST00000468338 SPIDRQ14159 915 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 PTPRCAPQ14761 206 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 CHRNA6Q15825 494 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 CCNG2Q16589 344 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 CLPPQ16740 277 aaPredicted RBP11□□□□□ -0.65
COL4A6-205ENST00000468338 C4orf17Q53FE4 359 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 ZNF648Q5T619 568 aaPredicted RBP11□□□□□ -0.65
COL4A6-205ENST00000468338 IYDQ6PHW0 289 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 ARHGEF18Q6ZSZ5 1173 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 CHST15Q7LFX5 561 aaPredicted RBP11□□□□□ -0.65
COL4A6-205ENST00000468338 C11orf96Q7Z7L8 435 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 PHYKPLQ8IUZ5 450 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 CCNJLQ8IV13 435 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 SPNS2Q8IVW8 549 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 DDHD1Q8NEL9 900 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 PATE1Q8WXA2 126 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 ATG4AQ8WYN0 398 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 PRR11Q96HE9 360 aaPredicted RBP11□□□□□ -0.65
COL4A6-205ENST00000468338 TBL1YQ9BQ87 522 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 APOL2Q9BQE5 337 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 SUDS3Q9H7L9 328 aaPredicted RBP11□□□□□ -0.65
COL4A6-205ENST00000468338 POLR1BQ9H9Y6 1135 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 NEUROD4Q9HD90 331 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 ARFGAP3Q9NP61 516 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 TBC1D29Q9UFV1 150 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 PKP3Q9Y446 797 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 PRKAB1Q9Y478 270 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 PCDHGA8Q9Y5G5 932 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 GPC6Q9Y625 555 aaPredicted RBP11□□□□□ -0.65
COL4A6-205ENST00000468338 ARL5AQ9Y689 179 aa11□□□□□ -0.65
COL4A6-205ENST00000468338 A0A087WV48 116 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 GLYATL1P3A0A0U1RQE8 302 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 GOLGA6L3A6NEY3 463 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 C2orf81A6NN90 581 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 ERI2A8K979 691 aaKnown RBP10.99□□□□□ -0.65
COL4A6-205ENST00000468338 EIF1AYO14602 144 aaKnown RBP10.99□□□□□ -0.65
COL4A6-205ENST00000468338 STX7O15400 261 aaKnown RBP10.99□□□□□ -0.65
COL4A6-205ENST00000468338 PSMD3O43242 534 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 BUD23O43709 281 aaKnown RBP10.99□□□□□ -0.65
COL4A6-205ENST00000468338 UGT1A9O60656 530 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 USP12O75317 370 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 CDK14O94921 469 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 RPLP0P05388 317 aaKnown RBP10.99□□□□□ -0.65
COL4A6-205ENST00000468338 F3P13726 295 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 UGT1A6P19224 532 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 UGT1A1P22309 533 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 UGT1A4P22310 534 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 UGT1A3P35503 534 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 UGT1A5P35504 534 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 ZNF140P52738 457 aaPredicted RBP10.99□□□□□ -0.65
COL4A6-205ENST00000468338 PDE1BQ01064 536 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 ITGA9Q13797 1035 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 SPARCL1Q14515 664 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.99□□□□□ -0.65
COL4A6-205ENST00000468338 B3GNT8Q7Z7M8 397 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 LSMEM2Q8N112 164 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 MEIOBQ8N635 442 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 OR4K2Q8NGD2 314 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 ZNF398Q8TD17 642 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 SLC37A2Q8TED4 501 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 C1orf54Q8WWF1 131 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 ATXN7L3BQ96GX2 97 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 LIN37Q96GY3 246 aaPredicted RBP10.99□□□□□ -0.65
COL4A6-205ENST00000468338 GFM1Q96RP9 751 aaKnown RBP10.99□□□□□ -0.65
COL4A6-205ENST00000468338 TIMM29Q9BSF4 260 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 LRRC40Q9H9A6 602 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 UGT1A7Q9HAW7 530 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 UGT1A10Q9HAW8 530 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 UGT1A8Q9HAW9 530 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 SARS2Q9NP81 518 aaKnown RBP10.99□□□□□ -0.65
COL4A6-205ENST00000468338 SLC23A2Q9UGH3 650 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 DRG1Q9Y295 367 aaKnown RBP10.99□□□□□ -0.65
COL4A6-205ENST00000468338 ZKSCAN5Q9Y2L8 839 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 KCTD3Q9Y597 815 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 PTPRQQ9UMZ3 2332 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 LAMA5O15230 3695 aa10.99□□□□□ -0.65
COL4A6-205ENST00000468338 PIKFYVEQ9Y2I7 2098 aa10.98□□□□□ -0.65
COL4A6-205ENST00000468338 OR5K4A6NMS3 321 aa10.98□□□□□ -0.65
COL4A6-205ENST00000468338 TMX2-CTNND1H3BSU7 103 aa10.98□□□□□ -0.65
COL4A6-205ENST00000468338 H7C0S8 307 aa10.98□□□□□ -0.65
COL4A6-205ENST00000468338 KMOO15229 486 aa10.98□□□□□ -0.65
COL4A6-205ENST00000468338 GPR39O43194 453 aa10.98□□□□□ -0.65
COL4A6-205ENST00000468338 TLX3O43711 291 aaPredicted RBP10.98□□□□□ -0.65
COL4A6-205ENST00000468338 BRINP1O60477 761 aa10.98□□□□□ -0.65
COL4A6-205ENST00000468338 KCNJ13O60928 360 aa10.98□□□□□ -0.65
COL4A6-205ENST00000468338 CPNE3O75131 537 aaKnown RBP10.98□□□□□ -0.65
COL4A6-205ENST00000468338 MTX2O75431 263 aa10.98□□□□□ -0.65
COL4A6-205ENST00000468338 KRT37O76014 449 aa10.98□□□□□ -0.65
COL4A6-205ENST00000468338 SRP72O76094 671 aaKnown RBP10.98□□□□□ -0.65
COL4A6-205ENST00000468338 SUN1O94901 812 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms