RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 PGS1Q32NB8 556 aa4.24□□□□□ -1.73
SSR3-204ENST00000467733 KHDC1Q4VXA5 237 aaKnown RBP4.24□□□□□ -1.73
SSR3-204ENST00000467733 C10orf120Q5SQS8 335 aa4.24□□□□□ -1.73
SSR3-204ENST00000467733 ZNF788Q6ZQV5 615 aa4.24□□□□□ -1.73
SSR3-204ENST00000467733 CHST9Q7L1S5 443 aa4.24□□□□□ -1.73
SSR3-204ENST00000467733 TICAM1Q8IUC6 712 aa4.24□□□□□ -1.73
SSR3-204ENST00000467733 FAM217AQ8IXS0 508 aa4.24□□□□□ -1.73
SSR3-204ENST00000467733 SLC25A45Q8N413 288 aa4.24□□□□□ -1.73
SSR3-204ENST00000467733 CPXM2Q8N436 756 aa4.24□□□□□ -1.73
SSR3-204ENST00000467733 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.24□□□□□ -1.73
SSR3-204ENST00000467733 OR5B17Q8NGF7 314 aa4.24□□□□□ -1.73
SSR3-204ENST00000467733 OR6B3Q8NGW1 331 aa4.24□□□□□ -1.73
SSR3-204ENST00000467733 WDR36Q8NI36 951 aaKnown RBP4.24□□□□□ -1.73
SSR3-204ENST00000467733 SPATA20Q8TB22 786 aa4.24□□□□□ -1.73
SSR3-204ENST00000467733 SAAL1Q96ER3 474 aa4.24□□□□□ -1.73
SSR3-204ENST00000467733 MARS2Q96GW9 593 aaKnown RBP4.24□□□□□ -1.73
SSR3-204ENST00000467733 CDK5RAP3Q96JB5 506 aa4.24□□□□□ -1.73
SSR3-204ENST00000467733 APOLD1Q96LR9 279 aa4.24□□□□□ -1.73
SSR3-204ENST00000467733 KCNK16Q96T55 309 aa4.24□□□□□ -1.73
SSR3-204ENST00000467733 VRK1Q99986 396 aaPredicted RBP4.24□□□□□ -1.73
SSR3-204ENST00000467733 ZSWIM1Q9BR11 485 aa4.24□□□□□ -1.73
SSR3-204ENST00000467733 DCLK3Q9C098 648 aa4.24□□□□□ -1.73
SSR3-204ENST00000467733 ABCG4Q9H172 646 aa4.24□□□□□ -1.73
SSR3-204ENST00000467733 PDE11AQ9HCR9 933 aa4.24□□□□□ -1.73
SSR3-204ENST00000467733 INTS13Q9NVM9 706 aa4.24□□□□□ -1.73
SSR3-204ENST00000467733 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.24□□□□□ -1.73
SSR3-204ENST00000467733 OSER1Q9NX31 292 aa4.24□□□□□ -1.73
SSR3-204ENST00000467733 SIDT1Q9NXL6 827 aaKnown RBP4.24□□□□□ -1.73
SSR3-204ENST00000467733 NLGN3Q9NZ94 848 aa4.24□□□□□ -1.73
SSR3-204ENST00000467733 PNMA8BQ9ULN7 279 aaPredicted RBP4.24□□□□□ -1.73
SSR3-204ENST00000467733 CLEC4EQ9ULY5 219 aa4.24□□□□□ -1.73
SSR3-204ENST00000467733 PLA2G4CQ9UP65 541 aa4.24□□□□□ -1.73
SSR3-204ENST00000467733 SCML2Q9UQR0 700 aa4.24□□□□□ -1.73
SSR3-204ENST00000467733 CSMD2Q7Z408 3487 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 ANKHD1Q8IWZ3 2542 aaKnown RBP4.23□□□□□ -1.73
SSR3-204ENST00000467733 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.23□□□□□ -1.73
SSR3-204ENST00000467733 A8MXQ7 604 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 MID1O15344 667 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 RNASEH1O60930 286 aaKnown RBP4.23□□□□□ -1.73
SSR3-204ENST00000467733 RTN2O75298 545 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 SLC43A1O75387 559 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 RNASEH2AO75792 299 aaKnown RBP4.23□□□□□ -1.73
SSR3-204ENST00000467733 PIAS2O75928 621 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 TNNC2P02585 160 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 FTLP02792 175 aaPredicted RBP4.23□□□□□ -1.73
SSR3-204ENST00000467733 S100BP04271 92 aaPredicted RBP4.23□□□□□ -1.73
SSR3-204ENST00000467733 KRT18P05783 430 aaKnown RBP4.23□□□□□ -1.73
SSR3-204ENST00000467733 ATP5BP06576 529 aaKnown RBP4.23□□□□□ -1.73
SSR3-204ENST00000467733 THEGLP0DJG4 465 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 GIMD1P0DJR0 217 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 LIPCP11150 499 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 RARGP13631 454 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 TNFRSF8P28908 595 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 HLA-FP30511 346 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 CORO1AP31146 461 aaKnown RBP4.23□□□□□ -1.73
SSR3-204ENST00000467733 SLC5A2P31639 672 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 TOB1P50616 345 aaPredicted RBP4.23□□□□□ -1.73
SSR3-204ENST00000467733 PDX1P52945 283 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 PROK1P58294 105 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 TNNC1P63316 161 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 PIGFQ07326 219 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 ZNF844Q08AG5 666 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 SRSF6Q13247 344 aaKnown RBP4.23□□□□□ -1.73
SSR3-204ENST00000467733 ZNF177Q13360 481 aaPredicted RBP4.23□□□□□ -1.73
SSR3-204ENST00000467733 ANKRD1Q15327 319 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 CST6Q15828 149 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 HNRNPA1L2Q32P51 320 aaKnown RBP4.23□□□□□ -1.73
SSR3-204ENST00000467733 KRTAP21-3Q3LHN1 58 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 PAQR9Q6ZVX9 377 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 C14orf80Q86SX3 495 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 TADA2BQ86TJ2 420 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 ADIPOR2Q86V24 386 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 SFR1Q86XK3 245 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 WDR49Q8IV35 697 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 ZC3H3Q8IXZ2 948 aaKnown RBP4.23□□□□□ -1.73
SSR3-204ENST00000467733 NECAB1Q8N987 351 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 ZMIZ2Q8NF64 920 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 DDI1Q8WTU0 396 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 HTR3CQ8WXA8 447 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 MIB2Q96AX9 1013 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 ARRDC3Q96B67 414 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 TNIP3Q96KP6 325 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 PLIN2Q99541 437 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 SMOQ99835 787 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 OMDQ99983 421 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 MED10Q9BTT4 135 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 STRA6Q9BX79 667 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 NEUROG2Q9H2A3 272 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 ZHX3Q9H4I2 956 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 WDCPQ9H6R7 721 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 NMUR1Q9HB89 426 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 CSNK1G1Q9HCP0 422 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 ABCB8Q9NUT2 735 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 KCTD5Q9NXV2 234 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 NCKIPSDQ9NZQ3 722 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 SUN2Q9UH99 717 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 FEZ2Q9UHY8 353 aaPredicted RBP4.23□□□□□ -1.73
SSR3-204ENST00000467733 GGA2Q9UJY4 613 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 AGO1Q9UL18 857 aaKnown RBP4.23□□□□□ -1.73
SSR3-204ENST00000467733 EXOC7Q9UPT5 735 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms