RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 USP51Q70EK9 711 aa14.59□□□□□ -0.07
PRPF38B-204ENST00000467302 LYSMD3Q7Z3D4 306 aa14.59□□□□□ -0.07
PRPF38B-204ENST00000467302 CROCCP3Q8IVE0 287 aa14.59□□□□□ -0.07
PRPF38B-204ENST00000467302 KIAA2013Q8IYS2 634 aa14.59□□□□□ -0.07
PRPF38B-204ENST00000467302 LGI2Q8N0V4 545 aa14.59□□□□□ -0.07
PRPF38B-204ENST00000467302 BBS5Q8N3I7 341 aa14.59□□□□□ -0.07
PRPF38B-204ENST00000467302 FBXO39Q8N4B4 442 aa14.59□□□□□ -0.07
PRPF38B-204ENST00000467302 ZNF461Q8TAF7 563 aa14.59□□□□□ -0.07
PRPF38B-204ENST00000467302 DNAJB14Q8TBM8 379 aa14.59□□□□□ -0.07
PRPF38B-204ENST00000467302 MYEOVQ96EZ4 313 aa14.59□□□□□ -0.07
PRPF38B-204ENST00000467302 C1QTNF3Q9BXJ4 246 aa14.59□□□□□ -0.07
PRPF38B-204ENST00000467302 OSBPL6Q9BZF3 934 aa14.59□□□□□ -0.07
PRPF38B-204ENST00000467302 BRINP2Q9C0B6 783 aa14.59□□□□□ -0.07
PRPF38B-204ENST00000467302 RC3H2Q9HBD1 1191 aaKnown RBP14.59□□□□□ -0.07
PRPF38B-204ENST00000467302 SEMA4BQ9NPR2 832 aaPredicted RBP14.59□□□□□ -0.07
PRPF38B-204ENST00000467302 INTS10Q9NVR2 710 aaKnown RBP14.59□□□□□ -0.07
PRPF38B-204ENST00000467302 ZNF225Q9UK10 706 aa14.59□□□□□ -0.07
PRPF38B-204ENST00000467302 CDC14AQ9UNH5 594 aa14.59□□□□□ -0.07
PRPF38B-204ENST00000467302 ZNF840PA6NDX5 716 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 SUPT3HB4E1H0 165 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 CLOCKO15516 846 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 EFCAB14O75071 495 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 SUPT3HO75486 399 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 ECI2O75521 394 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 ABLIM3O94929 683 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 CLIC3O95833 236 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 PRSS56P0CW18 603 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 UMPSP11172 480 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 LAG3P18627 525 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 CAPGP40121 348 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 SLC11A2P49281 568 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 ANKS6Q68DC2 871 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 ABRAXAS1Q6UWZ7 409 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 PATL1Q86TB9 770 aaKnown RBP14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 TBC1D21Q8IYX1 336 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 FNDC8Q8TC99 324 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 CYGBQ8WWM9 190 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 KCTD14Q9BQ13 255 aaPredicted RBP14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 NUSAP1Q9BXS6 441 aaKnown RBP14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 RETREG1Q9H6L5 497 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 SYTL2Q9HCH5 934 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 SMPD3Q9NY59 655 aaPredicted RBP14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 RNF112Q9ULX5 631 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 TIMM22Q9Y584 194 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 FADS3Q9Y5Q0 445 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 CROCCQ5TZA2 2017 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 DYTNA2CJ06 578 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 TYW5A2RUC4 315 aaKnown RBP14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 TRIM64BA6NI03 449 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 KLK8O60259 260 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 SNAP91O60641 907 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 PRAMEF11O60813 436 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 GJB5O95377 273 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 PIRTP0C851 137 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 PRDX3P30048 256 aaKnown RBP14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 ACVRL1P37023 503 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 EEFSECP57772 596 aaKnown RBP14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 KCNK10P57789 538 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 PMS2P3Q13401 168 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 GALNT3Q14435 633 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 TSNQ15631 228 aaKnown RBP14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 TAF12Q16514 161 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 C5orf22Q49AR2 442 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 CFAP52Q8N1V2 620 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 TMEM199Q8N511 208 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 ZNF420Q8TAQ5 688 aaPredicted RBP14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 FUBP1Q96AE4 644 aaKnown RBP14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 CDKN2AIPNLQ96HQ2 116 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 RPL10LQ96L21 214 aaKnown RBP14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 PLEKHG4BQ96PX9 1271 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 TRIB3Q96RU7 358 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 CXorf21Q9HAI6 301 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 PLGRKTQ9HBL7 147 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 TRPM5Q9NZQ8 1165 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 ANAPC2Q9UJX6 822 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 YIPF1Q9Y548 306 aa14.58□□□□□ -0.08
PRPF38B-204ENST00000467302 KANSL1LA0AUZ9 987 aa14.57□□□□□ -0.08
PRPF38B-204ENST00000467302 STX16O14662 325 aa14.57□□□□□ -0.08
PRPF38B-204ENST00000467302 SLC22A3O75751 556 aa14.57□□□□□ -0.08
PRPF38B-204ENST00000467302 BAIAP3O94812 1187 aa14.57□□□□□ -0.08
PRPF38B-204ENST00000467302 RHOBTB1O94844 696 aa14.57□□□□□ -0.08
PRPF38B-204ENST00000467302 SEC24DO94855 1032 aaPredicted RBP14.57□□□□□ -0.08
PRPF38B-204ENST00000467302 ESRRBO95718 433 aa14.57□□□□□ -0.08
PRPF38B-204ENST00000467302 NCK1P16333 377 aa14.57□□□□□ -0.08
PRPF38B-204ENST00000467302 HMGA1P17096 107 aaKnown RBP14.57□□□□□ -0.08
PRPF38B-204ENST00000467302 DCKP27707 260 aa14.57□□□□□ -0.08
PRPF38B-204ENST00000467302 TTKP33981 857 aa14.57□□□□□ -0.08
PRPF38B-204ENST00000467302 RPS9P46781 194 aaKnown RBP14.57□□□□□ -0.08
PRPF38B-204ENST00000467302 UFM1P61960 85 aa14.57□□□□□ -0.08
PRPF38B-204ENST00000467302 FBXO48Q5FWF7 155 aa14.57□□□□□ -0.08
PRPF38B-204ENST00000467302 ALG1LQ6GMV1 187 aa14.57□□□□□ -0.08
PRPF38B-204ENST00000467302 FAM117BQ6P1L5 589 aa14.57□□□□□ -0.08
PRPF38B-204ENST00000467302 ELMSAN1Q6PJG2 1045 aa14.57□□□□□ -0.08
PRPF38B-204ENST00000467302 SYVN1Q86TM6 617 aa14.57□□□□□ -0.08
PRPF38B-204ENST00000467302 IFNEQ86WN2 208 aa14.57□□□□□ -0.08
PRPF38B-204ENST00000467302 DHRSXQ8N5I4 330 aa14.57□□□□□ -0.08
PRPF38B-204ENST00000467302 PLD4Q96BZ4 506 aa14.57□□□□□ -0.08
PRPF38B-204ENST00000467302 HSPBAP1Q96EW2 488 aa14.57□□□□□ -0.08
PRPF38B-204ENST00000467302 TRMT2BQ96GJ1 504 aaKnown RBP14.57□□□□□ -0.08
PRPF38B-204ENST00000467302 SLC30A3Q99726 388 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms