RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 UBXN10Q96LJ8 280 aa3.44□□□□□ -1.86
XRN1-206ENST00000467077 SIN3AQ96ST3 1273 aa3.44□□□□□ -1.86
XRN1-206ENST00000467077 GPR63Q9BZJ6 419 aa3.44□□□□□ -1.86
XRN1-206ENST00000467077 BEX4Q9NWD9 120 aaPredicted RBP3.44□□□□□ -1.86
XRN1-206ENST00000467077 MCM9Q9NXL9 1143 aa3.44□□□□□ -1.86
XRN1-206ENST00000467077 LUZP4Q9P127 313 aa3.44□□□□□ -1.86
XRN1-206ENST00000467077 HCN3Q9P1Z3 774 aa3.44□□□□□ -1.86
XRN1-206ENST00000467077 AMDHD2Q9Y303 409 aa3.44□□□□□ -1.86
XRN1-206ENST00000467077 C2CD2Q9Y426 696 aa3.44□□□□□ -1.86
XRN1-206ENST00000467077 LY75O60449 1722 aa3.44□□□□□ -1.86
XRN1-206ENST00000467077 ACEP12821 1306 aa3.44□□□□□ -1.86
XRN1-206ENST00000467077 PDS5AQ29RF7 1337 aaKnown RBP3.44□□□□□ -1.86
XRN1-206ENST00000467077 QRICH2Q9H0J4 1663 aa3.43□□□□□ -1.86
XRN1-206ENST00000467077 ADGRB1O14514 1584 aa3.43□□□□□ -1.86
XRN1-206ENST00000467077 GAGE10A6NGK3 116 aa3.43□□□□□ -1.86
XRN1-206ENST00000467077 CREB3O43889 395 aa3.43□□□□□ -1.86
XRN1-206ENST00000467077 ETFAP13804 333 aa3.43□□□□□ -1.86
XRN1-206ENST00000467077 ZNF26P17031 533 aaPredicted RBP3.43□□□□□ -1.86
XRN1-206ENST00000467077 CD58P19256 250 aa3.43□□□□□ -1.86
XRN1-206ENST00000467077 POU1F1P28069 291 aa3.43□□□□□ -1.86
XRN1-206ENST00000467077 PPM1FP49593 454 aaPredicted RBP3.43□□□□□ -1.86
XRN1-206ENST00000467077 TLE2Q04725 743 aa3.43□□□□□ -1.86
XRN1-206ENST00000467077 NEDD9Q14511 834 aa3.43□□□□□ -1.86
XRN1-206ENST00000467077 TMEM95Q3KNT9 176 aa3.43□□□□□ -1.86
XRN1-206ENST00000467077 FBXL16Q8N461 479 aa3.43□□□□□ -1.86
XRN1-206ENST00000467077 ZNF473Q8WTR7 871 aaKnown RBP3.43□□□□□ -1.86
XRN1-206ENST00000467077 FBXL8Q96CD0 374 aa3.43□□□□□ -1.86
XRN1-206ENST00000467077 MAELQ96JY0 434 aaKnown RBP3.43□□□□□ -1.86
XRN1-206ENST00000467077 SCLT1Q96NL6 688 aa3.43□□□□□ -1.86
XRN1-206ENST00000467077 BBS4Q96RK4 519 aa3.43□□□□□ -1.86
XRN1-206ENST00000467077 LBHD1Q9BQE6 289 aaPredicted RBP3.43□□□□□ -1.86
XRN1-206ENST00000467077 HEMGNQ9BXL5 484 aa3.43□□□□□ -1.86
XRN1-206ENST00000467077 DDX4Q9NQI0 724 aaKnown RBP3.43□□□□□ -1.86
XRN1-206ENST00000467077 C20orf141Q9NUB4 165 aa3.43□□□□□ -1.86
XRN1-206ENST00000467077 INTS10Q9NVR2 710 aaKnown RBP3.43□□□□□ -1.86
XRN1-206ENST00000467077 SLC25A10Q9UBX3 287 aaPredicted RBP3.43□□□□□ -1.86
XRN1-206ENST00000467077 HSPB7Q9UBY9 170 aa3.43□□□□□ -1.86
XRN1-206ENST00000467077 DOT1LQ8TEK3 1739 aa3.43□□□□□ -1.86
XRN1-206ENST00000467077 C5P01031 1676 aa3.43□□□□□ -1.86
XRN1-206ENST00000467077 TAF1LQ8IZX4 1826 aa3.42□□□□□ -1.86
XRN1-206ENST00000467077 BRD4O60885 1362 aaPredicted RBP3.42□□□□□ -1.86
XRN1-206ENST00000467077 TRPM1Q7Z4N2 1603 aa3.42□□□□□ -1.86
XRN1-206ENST00000467077 BCAT2O15382 392 aaPredicted RBP3.42□□□□□ -1.86
XRN1-206ENST00000467077 TACC1O75410 805 aa3.42□□□□□ -1.86
XRN1-206ENST00000467077 MMP2P08253 660 aa3.42□□□□□ -1.86
XRN1-206ENST00000467077 IFIT1P09914 478 aaKnown RBP3.42□□□□□ -1.86
XRN1-206ENST00000467077 AGAP20933 346 aa3.42□□□□□ -1.86
XRN1-206ENST00000467077 CNTFP26441 200 aa3.42□□□□□ -1.86
XRN1-206ENST00000467077 CCT5P48643 541 aa3.42□□□□□ -1.86
XRN1-206ENST00000467077 GRIK3Q13003 919 aa3.42□□□□□ -1.86
XRN1-206ENST00000467077 CTF1Q16619 201 aa3.42□□□□□ -1.86
XRN1-206ENST00000467077 MMEL1Q495T6 779 aa3.42□□□□□ -1.86
XRN1-206ENST00000467077 NAA35Q5VZE5 725 aa3.42□□□□□ -1.86
XRN1-206ENST00000467077 TRNP1Q6NT89 227 aa3.42□□□□□ -1.86
XRN1-206ENST00000467077 B3GNT6Q6ZMB0 384 aa3.42□□□□□ -1.86
XRN1-206ENST00000467077 DHX40Q8IX18 779 aaKnown RBP3.42□□□□□ -1.86
XRN1-206ENST00000467077 SCCPDHQ8NBX0 429 aa3.42□□□□□ -1.86
XRN1-206ENST00000467077 AGBL3Q8NEM8 1001 aa3.42□□□□□ -1.86
XRN1-206ENST00000467077 ZCCHC10Q8TBK6 192 aa3.42□□□□□ -1.86
XRN1-206ENST00000467077 ZNF570Q96NI8 536 aa3.42□□□□□ -1.86
XRN1-206ENST00000467077 FUZQ9BT04 418 aa3.42□□□□□ -1.86
XRN1-206ENST00000467077 PCDH9Q9HC56 1237 aa3.42□□□□□ -1.86
XRN1-206ENST00000467077 FGF22Q9HCT0 170 aa3.42□□□□□ -1.86
XRN1-206ENST00000467077 PADI1Q9ULC6 663 aa3.42□□□□□ -1.86
XRN1-206ENST00000467077 FAM96BQ9Y3D0 163 aa3.42□□□□□ -1.86
XRN1-206ENST00000467077 N4BP2Q86UW6 1770 aaPredicted RBP3.42□□□□□ -1.86
XRN1-206ENST00000467077 BCL9O00512 1426 aa3.42□□□□□ -1.86
XRN1-206ENST00000467077 POLR3AO14802 1390 aaPredicted RBP3.41□□□□□ -1.86
XRN1-206ENST00000467077 RGPD2P0DJD1 1756 aa3.41□□□□□ -1.86
XRN1-206ENST00000467077 SLIT3O75094 1523 aa3.41□□□□□ -1.86
XRN1-206ENST00000467077 ABCC6O95255 1503 aa3.41□□□□□ -1.86
XRN1-206ENST00000467077 TEX13CA0A0J9YWL9 993 aa3.41□□□□□ -1.86
XRN1-206ENST00000467077 MT-CYBP00156 380 aaPredicted RBP3.41□□□□□ -1.86
XRN1-206ENST00000467077 POLBP06746 335 aa3.41□□□□□ -1.86
XRN1-206ENST00000467077 DCTP40126 519 aa3.41□□□□□ -1.86
XRN1-206ENST00000467077 SEC61BP60468 96 aaKnown RBP3.41□□□□□ -1.86
XRN1-206ENST00000467077 VAMP2P63027 116 aa3.41□□□□□ -1.86
XRN1-206ENST00000467077 GAGE5Q13069 117 aa3.41□□□□□ -1.86
XRN1-206ENST00000467077 GAGE6Q13070 117 aa3.41□□□□□ -1.86
XRN1-206ENST00000467077 BIRC3Q13489 604 aa3.41□□□□□ -1.86
XRN1-206ENST00000467077 TRPC3Q13507 836 aa3.41□□□□□ -1.86
XRN1-206ENST00000467077 TMEM187Q14656 261 aa3.41□□□□□ -1.86
XRN1-206ENST00000467077 RNPS1Q15287 305 aaKnown RBP3.41□□□□□ -1.86
XRN1-206ENST00000467077 HIST2H2ACQ16777 129 aaPredicted RBP3.41□□□□□ -1.86
XRN1-206ENST00000467077 TCTN1Q2MV58 587 aa3.41□□□□□ -1.86
XRN1-206ENST00000467077 SGO1Q5FBB7 561 aa3.41□□□□□ -1.86
XRN1-206ENST00000467077 TXNDC8Q6A555 127 aa3.41□□□□□ -1.86
XRN1-206ENST00000467077 ANKRD54Q6NXT1 300 aa3.41□□□□□ -1.86
XRN1-206ENST00000467077 MTSS1LQ765P7 747 aa3.41□□□□□ -1.86
XRN1-206ENST00000467077 RRM2BQ7LG56 351 aa3.41□□□□□ -1.86
XRN1-206ENST00000467077 ZNF354CQ86Y25 554 aa3.41□□□□□ -1.86
XRN1-206ENST00000467077 SMAP1Q8IYB5 467 aaPredicted RBP3.41□□□□□ -1.86
XRN1-206ENST00000467077 CPXCR1Q8N123 301 aa3.41□□□□□ -1.86
XRN1-206ENST00000467077 ZCCHC9Q8N567 271 aaKnown RBP3.41□□□□□ -1.86
XRN1-206ENST00000467077 BEST2Q8NFU1 509 aa3.41□□□□□ -1.86
XRN1-206ENST00000467077 PPM1EQ8WY54 764 aa3.41□□□□□ -1.86
XRN1-206ENST00000467077 ZBTB10Q96DT7 871 aa3.41□□□□□ -1.86
XRN1-206ENST00000467077 ZNF300Q96RE9 604 aaPredicted RBP3.41□□□□□ -1.86
XRN1-206ENST00000467077 HAUS8Q9BT25 410 aa3.41□□□□□ -1.86
XRN1-206ENST00000467077 ESRP2Q9H6T0 727 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms