RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 THOC3Q96J01 351 aaKnown RBP12.3□□□□□ -0.44
UBR4-210ENST00000466969 NPY6RQ99463 290 aa12.3□□□□□ -0.44
UBR4-210ENST00000466969 SEPT11Q9NVA2 429 aaKnown RBP12.3□□□□□ -0.44
UBR4-210ENST00000466969 TMEM248Q9NWD8 314 aa12.3□□□□□ -0.44
UBR4-210ENST00000466969 SOHLH2Q9NX45 425 aa12.3□□□□□ -0.44
UBR4-210ENST00000466969 NDOR1Q9UHB4 597 aa12.3□□□□□ -0.44
UBR4-210ENST00000466969 PCYT1BQ9Y5K3 369 aaPredicted RBP12.3□□□□□ -0.44
UBR4-210ENST00000466969 PKD1L1Q8TDX9 2849 aa12.29□□□□□ -0.44
UBR4-210ENST00000466969 CCDC88CQ9P219 2028 aa12.29□□□□□ -0.44
UBR4-210ENST00000466969 SLC9B1P1A6NJY1 282 aa12.29□□□□□ -0.44
UBR4-210ENST00000466969 MED7O43513 233 aa12.29□□□□□ -0.44
UBR4-210ENST00000466969 DNAJC6O75061 913 aa12.29□□□□□ -0.44
UBR4-210ENST00000466969 HEXIM1O94992 359 aaKnown RBP12.29□□□□□ -0.44
UBR4-210ENST00000466969 ZBTB11O95625 1053 aaPredicted RBP12.29□□□□□ -0.44
UBR4-210ENST00000466969 MLYCDO95822 493 aa12.29□□□□□ -0.44
UBR4-210ENST00000466969 BRAFP15056 766 aa12.29□□□□□ -0.44
UBR4-210ENST00000466969 ABOP16442 354 aa12.29□□□□□ -0.44
UBR4-210ENST00000466969 RHOQP17081 205 aa12.29□□□□□ -0.44
UBR4-210ENST00000466969 TFE3P19532 575 aaPredicted RBP12.29□□□□□ -0.44
UBR4-210ENST00000466969 VIPR1P32241 457 aa12.29□□□□□ -0.44
UBR4-210ENST00000466969 TFF3Q07654 80 aa12.29□□□□□ -0.44
UBR4-210ENST00000466969 GPR18Q14330 331 aa12.29□□□□□ -0.44
UBR4-210ENST00000466969 PLA2G4EQ3MJ16 856 aa12.29□□□□□ -0.44
UBR4-210ENST00000466969 C11orf57Q6ZUT1 292 aaPredicted RBP12.29□□□□□ -0.44
UBR4-210ENST00000466969 HSD11B1LQ7Z5J1 315 aa12.29□□□□□ -0.44
UBR4-210ENST00000466969 CIARTQ8N365 385 aaPredicted RBP12.29□□□□□ -0.44
UBR4-210ENST00000466969 CD180Q99467 661 aa12.29□□□□□ -0.44
UBR4-210ENST00000466969 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.29□□□□□ -0.44
UBR4-210ENST00000466969 RASSF1Q9NS23 344 aa12.29□□□□□ -0.44
UBR4-210ENST00000466969 GPATCH2LQ9NWQ4 482 aa12.29□□□□□ -0.44
UBR4-210ENST00000466969 SCHIP1Q9P0W5 487 aaPredicted RBP12.29□□□□□ -0.44
UBR4-210ENST00000466969 VPS18Q9P253 973 aa12.29□□□□□ -0.44
UBR4-210ENST00000466969 ZNF624Q9P2J8 865 aaPredicted RBP12.29□□□□□ -0.44
UBR4-210ENST00000466969 COQ4Q9Y3A0 265 aa12.29□□□□□ -0.44
UBR4-210ENST00000466969 PDZK1P1A8MUH7 402 aa12.28□□□□□ -0.44
UBR4-210ENST00000466969 PSMD11O00231 422 aa12.28□□□□□ -0.44
UBR4-210ENST00000466969 ARHGEF9O43307 516 aa12.28□□□□□ -0.44
UBR4-210ENST00000466969 KLHL18O94889 574 aa12.28□□□□□ -0.44
UBR4-210ENST00000466969 ATE1O95260 518 aa12.28□□□□□ -0.44
UBR4-210ENST00000466969 LCA5LO95447 670 aa12.28□□□□□ -0.44
UBR4-210ENST00000466969 PYGLP06737 847 aa12.28□□□□□ -0.44
UBR4-210ENST00000466969 HBQ1P09105 142 aa12.28□□□□□ -0.44
UBR4-210ENST00000466969 ATXN8OSP0DMR3 200 aa12.28□□□□□ -0.44
UBR4-210ENST00000466969 NRG1Q02297 640 aaPredicted RBP12.28□□□□□ -0.44
UBR4-210ENST00000466969 CBLBQ13191 982 aa12.28□□□□□ -0.44
UBR4-210ENST00000466969 MEA1Q16626 185 aa12.28□□□□□ -0.44
UBR4-210ENST00000466969 CBWD6Q4V339 395 aa12.28□□□□□ -0.44
UBR4-210ENST00000466969 KRTCAP3Q53RY4 240 aa12.28□□□□□ -0.44
UBR4-210ENST00000466969 CBWD3Q5JTY5 395 aa12.28□□□□□ -0.44
UBR4-210ENST00000466969 CBWD5Q5RIA9 395 aa12.28□□□□□ -0.44
UBR4-210ENST00000466969 TCERG1LQ5VWI1 586 aa12.28□□□□□ -0.44
UBR4-210ENST00000466969 FAM183BPQ6ZVS7 135 aa12.28□□□□□ -0.44
UBR4-210ENST00000466969 SRLQ86TD4 932 aa12.28□□□□□ -0.44
UBR4-210ENST00000466969 NLRP14Q86W24 1093 aa12.28□□□□□ -0.44
UBR4-210ENST00000466969 CDC20BQ86Y33 519 aa12.28□□□□□ -0.44
UBR4-210ENST00000466969 KRTAP1-3Q8IUG1 177 aa12.28□□□□□ -0.44
UBR4-210ENST00000466969 SUN3Q8TAQ9 357 aa12.28□□□□□ -0.44
UBR4-210ENST00000466969 THAP3Q8WTV1 239 aaPredicted RBP12.28□□□□□ -0.44
UBR4-210ENST00000466969 NACC2Q96BF6 587 aa12.28□□□□□ -0.44
UBR4-210ENST00000466969 AP2M1Q96CW1 435 aa12.28□□□□□ -0.44
UBR4-210ENST00000466969 PGAP3Q96FM1 320 aaPredicted RBP12.28□□□□□ -0.44
UBR4-210ENST00000466969 DMRTA2Q96SC8 542 aa12.28□□□□□ -0.44
UBR4-210ENST00000466969 UCK2Q9BZX2 261 aa12.28□□□□□ -0.44
UBR4-210ENST00000466969 RMI1Q9H9A7 625 aa12.28□□□□□ -0.44
UBR4-210ENST00000466969 MAGEF1Q9HAY2 307 aa12.28□□□□□ -0.44
UBR4-210ENST00000466969 SLC40A1Q9NP59 571 aa12.28□□□□□ -0.44
UBR4-210ENST00000466969 EXOC1Q9NV70 894 aa12.28□□□□□ -0.44
UBR4-210ENST00000466969 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.28□□□□□ -0.44
UBR4-210ENST00000466969 UBA2Q9UBT2 640 aaPredicted RBP12.28□□□□□ -0.44
UBR4-210ENST00000466969 CD84Q9UIB8 345 aa12.28□□□□□ -0.44
UBR4-210ENST00000466969 SIK3Q9Y2K2 1263 aa12.28□□□□□ -0.44
UBR4-210ENST00000466969 C17orf113A0A1B0GUU1 675 aa12.27□□□□□ -0.45
UBR4-210ENST00000466969 SPRY1O43609 319 aaPredicted RBP12.27□□□□□ -0.45
UBR4-210ENST00000466969 TOXO94900 526 aa12.27□□□□□ -0.45
UBR4-210ENST00000466969 TSPAN12O95859 305 aa12.27□□□□□ -0.45
UBR4-210ENST00000466969 SOD1P00441 154 aa12.27□□□□□ -0.45
UBR4-210ENST00000466969 ATP1A1P05023 1023 aaKnown RBP12.27□□□□□ -0.45
UBR4-210ENST00000466969 MYBL2P10244 700 aa12.27□□□□□ -0.45
UBR4-210ENST00000466969 CUL4BQ13620 913 aa12.27□□□□□ -0.45
UBR4-210ENST00000466969 NFIL3Q16649 462 aa12.27□□□□□ -0.45
UBR4-210ENST00000466969 NAPRTQ6XQN6 538 aa12.27□□□□□ -0.45
UBR4-210ENST00000466969 C3P1Q6ZMU1 363 aa12.27□□□□□ -0.45
UBR4-210ENST00000466969 TRIM72Q6ZMU5 477 aa12.27□□□□□ -0.45
UBR4-210ENST00000466969 ZZZ3Q8IYH5 903 aa12.27□□□□□ -0.45
UBR4-210ENST00000466969 PPM1KQ8N3J5 372 aa12.27□□□□□ -0.45
UBR4-210ENST00000466969 AOPEPQ8N6M6 819 aa12.27□□□□□ -0.45
UBR4-210ENST00000466969 LILRB4Q8NHJ6 448 aa12.27□□□□□ -0.45
UBR4-210ENST00000466969 EXD1Q8NHP7 514 aa12.27□□□□□ -0.45
UBR4-210ENST00000466969 SNX21Q969T3 373 aa12.27□□□□□ -0.45
UBR4-210ENST00000466969 CXorf40BQ96DE9 158 aa12.27□□□□□ -0.45
UBR4-210ENST00000466969 PWWP2AQ96N64 755 aa12.27□□□□□ -0.45
UBR4-210ENST00000466969 MENTQ9BUN1 341 aa12.27□□□□□ -0.45
UBR4-210ENST00000466969 BDH2Q9BUT1 245 aa12.27□□□□□ -0.45
UBR4-210ENST00000466969 TLR10Q9BXR5 811 aa12.27□□□□□ -0.45
UBR4-210ENST00000466969 PLCB1Q9NQ66 1216 aa12.27□□□□□ -0.45
UBR4-210ENST00000466969 KLC4Q9NSK0 619 aa12.27□□□□□ -0.45
UBR4-210ENST00000466969 IFT80Q9P2H3 777 aaPredicted RBP12.27□□□□□ -0.45
UBR4-210ENST00000466969 NUP210LQ5VU65 1888 aa12.26□□□□□ -0.45
UBR4-210ENST00000466969 TMEM150CB9EJG8 249 aa12.26□□□□□ -0.45
UBR4-210ENST00000466969 E7EQ34 232 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms