RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 ATP13A5Q4VNC0 1218 aa18.42■□□□□ 0.54
CAPN3-209ENST00000466222 FAM46CQ5VWP2 391 aa18.42■□□□□ 0.54
CAPN3-209ENST00000466222 ZNF776Q68DI1 518 aaPredicted RBP18.42■□□□□ 0.54
CAPN3-209ENST00000466222 RIPOR1Q6ZS17 1223 aa18.42■□□□□ 0.54
CAPN3-209ENST00000466222 ADGRG6Q86SQ4 1221 aa18.42■□□□□ 0.54
CAPN3-209ENST00000466222 CEP97Q8IW35 865 aa18.42■□□□□ 0.54
CAPN3-209ENST00000466222 NRG4Q8WWG1 115 aa18.42■□□□□ 0.54
CAPN3-209ENST00000466222 SPDL1Q96EA4 605 aa18.42■□□□□ 0.54
CAPN3-209ENST00000466222 GPR22Q99680 433 aa18.42■□□□□ 0.54
CAPN3-209ENST00000466222 OMDQ99983 421 aa18.42■□□□□ 0.54
CAPN3-209ENST00000466222 BOCQ9BWV1 1114 aa18.42■□□□□ 0.54
CAPN3-209ENST00000466222 SNX15Q9NRS6 342 aa18.42■□□□□ 0.54
CAPN3-209ENST00000466222 NSMCE4AQ9NXX6 385 aa18.42■□□□□ 0.54
CAPN3-209ENST00000466222 FBXL21Q9UKT6 434 aa18.42■□□□□ 0.54
CAPN3-209ENST00000466222 FADS3Q9Y5Q0 445 aa18.42■□□□□ 0.54
CAPN3-209ENST00000466222 MYO10Q9HD67 2058 aa18.42■□□□□ 0.54
CAPN3-209ENST00000466222 FAM95CA0A1B0GW59 222 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 TMEM114B3SHH9 223 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 PHGDHO43175 533 aaKnown RBP18.41■□□□□ 0.54
CAPN3-209ENST00000466222 ITM2AO43736 263 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 RALBP11234 206 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 ZNF30P17039 623 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 IRX4P78413 519 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 FZD5Q13467 585 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 UBXN2BQ14CS0 331 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 ACOX1Q15067 660 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 GSTA3Q16772 222 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 TYSND1Q2T9J0 566 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 FBXO43Q4G163 708 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 TMEM31Q5JXX7 168 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 KIAA0408Q6ZU52 694 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 SDCCAG8Q86SQ7 713 aaPredicted RBP18.41■□□□□ 0.54
CAPN3-209ENST00000466222 OR6Y1Q8NGX8 325 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 ELMO2Q96JJ3 720 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 OLFM1Q99784 485 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 THTPAQ9BU02 230 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 LMAN1LQ9HAT1 526 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 TMPRSS11EQ9UL52 423 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 TCF20Q9UGU0 1960 aaKnown RBP18.41■□□□□ 0.54
CAPN3-209ENST00000466222 UBA6A0AVT1 1052 aaPredicted RBP18.41■□□□□ 0.54
CAPN3-209ENST00000466222 MAN2B1O00754 1011 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 CPA3P15088 417 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 C5AR1P21730 350 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 FMO4P31512 558 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 CDKN2DP55273 166 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 IRF9Q00978 393 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 CACNG1Q06432 222 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 USP10Q14694 798 aaKnown RBP18.41■□□□□ 0.54
CAPN3-209ENST00000466222 TECPR1Q7Z6L1 1165 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 SERPINA9Q86WD7 417 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 C10orf107Q8IVU9 208 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 GANCQ8TET4 914 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 MRGPRX1Q96LB2 322 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 SORT1Q99523 831 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 RIOK2Q9BVS4 552 aaKnown RBP18.41■□□□□ 0.54
CAPN3-209ENST00000466222 FBXL12Q9NXK8 326 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 SLC7A8Q9UHI5 535 aa18.41■□□□□ 0.54
CAPN3-209ENST00000466222 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.41■□□□□ 0.54
CAPN3-209ENST00000466222 APOA4P06727 396 aa18.4■□□□□ 0.54
CAPN3-209ENST00000466222 C6P13671 934 aa18.4■□□□□ 0.54
CAPN3-209ENST00000466222 KCNA4P22459 653 aa18.4■□□□□ 0.54
CAPN3-209ENST00000466222 PAX7P23759 505 aa18.4■□□□□ 0.54
CAPN3-209ENST00000466222 CPOXP36551 454 aa18.4■□□□□ 0.54
CAPN3-209ENST00000466222 HK2P52789 917 aa18.4■□□□□ 0.54
CAPN3-209ENST00000466222 TAS2R39P59534 338 aa18.4■□□□□ 0.54
CAPN3-209ENST00000466222 UBAP2LQ14157 1087 aaKnown RBP18.4■□□□□ 0.54
CAPN3-209ENST00000466222 CRY1Q16526 586 aa18.4■□□□□ 0.54
CAPN3-209ENST00000466222 TRMT11Q7Z4G4 463 aaKnown RBP18.4■□□□□ 0.54
CAPN3-209ENST00000466222 PIM3Q86V86 326 aa18.4■□□□□ 0.54
CAPN3-209ENST00000466222 SPATA6LQ8N4H0 392 aa18.4■□□□□ 0.54
CAPN3-209ENST00000466222 LPGAT1Q92604 370 aa18.4■□□□□ 0.54
CAPN3-209ENST00000466222 CMTM5Q96DZ9 223 aa18.4■□□□□ 0.54
CAPN3-209ENST00000466222 MSANTD3Q96H12 275 aa18.4■□□□□ 0.54
CAPN3-209ENST00000466222 PANX3Q96QZ0 392 aa18.4■□□□□ 0.54
CAPN3-209ENST00000466222 ZNF184Q99676 751 aaPredicted RBP18.4■□□□□ 0.54
CAPN3-209ENST00000466222 FAM83DQ9H4H8 585 aa18.4■□□□□ 0.54
CAPN3-209ENST00000466222 ZNF358Q9NW07 568 aa18.4■□□□□ 0.54
CAPN3-209ENST00000466222 TMEM216Q9P0N5 145 aa18.4■□□□□ 0.54
CAPN3-209ENST00000466222 MUTYHQ9UIF7 546 aa18.4■□□□□ 0.54
CAPN3-209ENST00000466222 APPL1Q9UKG1 709 aa18.4■□□□□ 0.54
CAPN3-209ENST00000466222 TCRBV21S2A2A0A5A6 115 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 PRR23AA6NEV1 266 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 NDUFS3O75489 264 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 LYPLA1O75608 230 aaPredicted RBP18.39■□□□□ 0.53
CAPN3-209ENST00000466222 RECQL5O94762 991 aaPredicted RBP18.39■□□□□ 0.53
CAPN3-209ENST00000466222 ADH1BP00325 375 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 ANPEPP15144 967 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 NDUFV2P19404 249 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 OGNP20774 298 aaKnown RBP18.39■□□□□ 0.53
CAPN3-209ENST00000466222 IDH3AP50213 366 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 PRKAA2P54646 552 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 TIAL1Q01085 375 aaKnown RBP eCLIP18.39■□□□□ 0.53
CAPN3-209ENST00000466222 C1orf146Q5VVC0 180 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 METTL21CQ5VZV1 264 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 SNX20Q7Z614 316 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 FAM124AQ86V42 546 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 LCA5Q86VQ0 697 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 CLDN19Q8N6F1 224 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 STON2Q8WXE9 905 aa18.39■□□□□ 0.53
CAPN3-209ENST00000466222 JADE3Q92613 823 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms