RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 MRGPRDQ8TDS7 321 aa4.5□□□□□ -1.69
SMC4-205ENST00000465563 NR1H4Q96RI1 486 aaPredicted RBP4.5□□□□□ -1.69
SMC4-205ENST00000465563 RHNO1Q9BSD3 238 aa4.5□□□□□ -1.69
SMC4-205ENST00000465563 SYT11Q9BT88 431 aa4.5□□□□□ -1.69
SMC4-205ENST00000465563 RAB6CQ9H0N0 254 aa4.5□□□□□ -1.69
SMC4-205ENST00000465563 DLGAP2Q9P1A6 1054 aa4.5□□□□□ -1.69
SMC4-205ENST00000465563 DNAJB4Q9UDY4 337 aa4.5□□□□□ -1.69
SMC4-205ENST00000465563 YIPF1Q9Y548 306 aa4.5□□□□□ -1.69
SMC4-205ENST00000465563 CLIC4Q9Y696 253 aa4.5□□□□□ -1.69
SMC4-205ENST00000465563 COL5A2P05997 1499 aaPredicted RBP4.49□□□□□ -1.69
SMC4-205ENST00000465563 A0A1W2PRG0 241 aa4.49□□□□□ -1.69
SMC4-205ENST00000465563 E9PQ18 207 aa4.49□□□□□ -1.69
SMC4-205ENST00000465563 SLCO1B7G3V0H7 640 aa4.49□□□□□ -1.69
SMC4-205ENST00000465563 HOXC11O43248 304 aaPredicted RBP4.49□□□□□ -1.69
SMC4-205ENST00000465563 PEX14O75381 377 aa4.49□□□□□ -1.69
SMC4-205ENST00000465563 FAM157CP0CG43 387 aa4.49□□□□□ -1.69
SMC4-205ENST00000465563 ALS2CLQ60I27 953 aa4.49□□□□□ -1.69
SMC4-205ENST00000465563 BHLHB9Q6PI77 547 aa4.49□□□□□ -1.69
SMC4-205ENST00000465563 SLC38A9Q8NBW4 561 aa4.49□□□□□ -1.69
SMC4-205ENST00000465563 IWS1Q96ST2 819 aa4.49□□□□□ -1.69
SMC4-205ENST00000465563 TMEM39BQ9GZU3 492 aa4.49□□□□□ -1.69
SMC4-205ENST00000465563 PPCSQ9HAB8 311 aa4.49□□□□□ -1.69
SMC4-205ENST00000465563 TMEM181Q9P2C4 612 aa4.49□□□□□ -1.69
SMC4-205ENST00000465563 KLHL8Q9P2G9 620 aaPredicted RBP4.49□□□□□ -1.69
SMC4-205ENST00000465563 CNOT8Q9UFF9 292 aaKnown RBP4.49□□□□□ -1.69
SMC4-205ENST00000465563 CYP46A1Q9Y6A2 500 aa4.49□□□□□ -1.69
SMC4-205ENST00000465563 ATP2A1O14983 1001 aa4.48□□□□□ -1.69
SMC4-205ENST00000465563 NADKO95544 446 aaPredicted RBP4.48□□□□□ -1.69
SMC4-205ENST00000465563 HMBSP08397 361 aa4.48□□□□□ -1.69
SMC4-205ENST00000465563 ANXA7P20073 488 aaKnown RBP4.48□□□□□ -1.69
SMC4-205ENST00000465563 ZBED6P86452 979 aa4.48□□□□□ -1.69
SMC4-205ENST00000465563 PPARDQ03181 441 aa4.48□□□□□ -1.69
SMC4-205ENST00000465563 GTDC1Q4AE62 458 aa4.48□□□□□ -1.69
SMC4-205ENST00000465563 SDCCAG8Q86SQ7 713 aaPredicted RBP4.48□□□□□ -1.69
SMC4-205ENST00000465563 GCSAMQ8N6F7 178 aa4.48□□□□□ -1.69
SMC4-205ENST00000465563 C1orf52Q8N6N3 182 aaKnown RBP4.48□□□□□ -1.69
SMC4-205ENST00000465563 GRHL3Q8TE85 626 aa4.48□□□□□ -1.69
SMC4-205ENST00000465563 MMABQ96EY8 250 aaPredicted RBP4.48□□□□□ -1.69
SMC4-205ENST00000465563 PIGMQ9H3S5 423 aa4.48□□□□□ -1.69
SMC4-205ENST00000465563 PCDHB16Q9NRJ7 776 aa4.48□□□□□ -1.69
SMC4-205ENST00000465563 ABCD3P28288 659 aa4.47□□□□□ -1.69
SMC4-205ENST00000465563 RARSP54136 660 aaKnown RBP4.47□□□□□ -1.69
SMC4-205ENST00000465563 F2RL1P55085 397 aa4.47□□□□□ -1.69
SMC4-205ENST00000465563 SNRPD1P62314 119 aaKnown RBP4.47□□□□□ -1.69
SMC4-205ENST00000465563 SLC9C2Q5TAH2 1124 aa4.47□□□□□ -1.69
SMC4-205ENST00000465563 ZNF613Q6PF04 617 aa4.47□□□□□ -1.69
SMC4-205ENST00000465563 TRIM65Q6PJ69 517 aa4.47□□□□□ -1.69
SMC4-205ENST00000465563 ISCA2Q86U28 154 aa4.47□□□□□ -1.69
SMC4-205ENST00000465563 PTOV1Q86YD1 416 aa4.47□□□□□ -1.69
SMC4-205ENST00000465563 RASGEF1CQ8N431 466 aa4.47□□□□□ -1.69
SMC4-205ENST00000465563 ZNF611Q8N823 705 aa4.47□□□□□ -1.69
SMC4-205ENST00000465563 ZNF614Q8N883 585 aa4.47□□□□□ -1.69
SMC4-205ENST00000465563 SMPDL3BQ92485 455 aa4.47□□□□□ -1.69
SMC4-205ENST00000465563 HTRA1Q92743 480 aa4.47□□□□□ -1.69
SMC4-205ENST00000465563 C18orf12Q96KH6 178 aa4.47□□□□□ -1.69
SMC4-205ENST00000465563 RTP3Q9BQQ7 232 aa4.47□□□□□ -1.69
SMC4-205ENST00000465563 STRA6Q9BX79 667 aa4.47□□□□□ -1.69
SMC4-205ENST00000465563 ZNF71Q9NQZ8 489 aaPredicted RBP4.47□□□□□ -1.69
SMC4-205ENST00000465563 GGA3Q9NZ52 723 aa4.47□□□□□ -1.69
SMC4-205ENST00000465563 CWC15Q9P013 229 aaKnown RBP4.47□□□□□ -1.69
SMC4-205ENST00000465563 KDM3AQ9Y4C1 1321 aa4.46□□□□□ -1.69
SMC4-205ENST00000465563 PRR32B1ATL7 298 aa4.46□□□□□ -1.7
SMC4-205ENST00000465563 GPR137BO60478 399 aa4.46□□□□□ -1.7
SMC4-205ENST00000465563 CSPG5O95196 566 aa4.46□□□□□ -1.7
SMC4-205ENST00000465563 ICAM1P05362 532 aa4.46□□□□□ -1.7
SMC4-205ENST00000465563 TPOP07202 933 aa4.46□□□□□ -1.7
SMC4-205ENST00000465563 EPHA2P29317 976 aa4.46□□□□□ -1.7
SMC4-205ENST00000465563 MMP15P51511 669 aa4.46□□□□□ -1.7
SMC4-205ENST00000465563 SLC8A3P57103 927 aa4.46□□□□□ -1.7
SMC4-205ENST00000465563 CD81P60033 236 aa4.46□□□□□ -1.7
SMC4-205ENST00000465563 MRPS34P82930 218 aaKnown RBP4.46□□□□□ -1.7
SMC4-205ENST00000465563 FRG1Q14331 258 aaKnown RBP4.46□□□□□ -1.7
SMC4-205ENST00000465563 DPCR1Q3MIW9 517 aa4.46□□□□□ -1.7
SMC4-205ENST00000465563 PWWP2BQ6NUJ5 590 aa4.46□□□□□ -1.7
SMC4-205ENST00000465563 INO80CQ6PI98 192 aaPredicted RBP4.46□□□□□ -1.7
SMC4-205ENST00000465563 FASTKD5Q7L8L6 764 aaKnown RBP4.46□□□□□ -1.7
SMC4-205ENST00000465563 SCML4Q8N228 414 aa4.46□□□□□ -1.7
SMC4-205ENST00000465563 OR2T12Q8NG77 320 aa4.46□□□□□ -1.7
SMC4-205ENST00000465563 ST8SIA4Q92187 359 aa4.46□□□□□ -1.7
SMC4-205ENST00000465563 TMEM143Q96AN5 459 aa4.46□□□□□ -1.7
SMC4-205ENST00000465563 RANGRFQ9HD47 186 aaPredicted RBP4.46□□□□□ -1.7
SMC4-205ENST00000465563 PLCXD1Q9NUJ7 323 aa4.46□□□□□ -1.7
SMC4-205ENST00000465563 COQ3Q9NZJ6 369 aa4.46□□□□□ -1.7
SMC4-205ENST00000465563 FBXW11Q9UKB1 542 aa4.46□□□□□ -1.7
SMC4-205ENST00000465563 TMEM184BQ9Y519 407 aaPredicted RBP4.46□□□□□ -1.7
SMC4-205ENST00000465563 DGKBQ9Y6T7 804 aa4.46□□□□□ -1.7
SMC4-205ENST00000465563 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.45□□□□□ -1.7
SMC4-205ENST00000465563 PLK4O00444 970 aa4.45□□□□□ -1.7
SMC4-205ENST00000465563 PAGE4O60829 102 aa4.45□□□□□ -1.7
SMC4-205ENST00000465563 SEC14L2O76054 403 aa4.45□□□□□ -1.7
SMC4-205ENST00000465563 ZFAND5O76080 213 aa4.45□□□□□ -1.7
SMC4-205ENST00000465563 GATA1P15976 413 aaPredicted RBP4.45□□□□□ -1.7
SMC4-205ENST00000465563 EPHA8P29322 1005 aaPredicted RBP4.45□□□□□ -1.7
SMC4-205ENST00000465563 WNT5AP41221 380 aa4.45□□□□□ -1.7
SMC4-205ENST00000465563 CCT5P48643 541 aa4.45□□□□□ -1.7
SMC4-205ENST00000465563 CCNG2Q16589 344 aa4.45□□□□□ -1.7
SMC4-205ENST00000465563 UGP2Q16851 508 aa4.45□□□□□ -1.7
SMC4-205ENST00000465563 ARHGEF16Q5VV41 709 aa4.45□□□□□ -1.7
SMC4-205ENST00000465563 PLD3Q8IV08 490 aa4.45□□□□□ -1.7
SMC4-205ENST00000465563 BMPERQ8N8U9 685 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms