RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 TBC1D29Q9UFV1 150 aa20.01■□□□□ 0.79
SKA3-205ENST00000465471 RP1P56715 2156 aa20.01■□□□□ 0.79
SKA3-205ENST00000465471 PIKFYVEQ9Y2I7 2098 aa20■□□□□ 0.79
SKA3-205ENST00000465471 MAGEB16A2A368 324 aa20■□□□□ 0.79
SKA3-205ENST00000465471 OR2AG2A6NM03 316 aa20■□□□□ 0.79
SKA3-205ENST00000465471 EFCAB8A8MWE9 144 aa20■□□□□ 0.79
SKA3-205ENST00000465471 CFAP99D6REC4 459 aa20■□□□□ 0.79
SKA3-205ENST00000465471 KCNJ13O60928 360 aa20■□□□□ 0.79
SKA3-205ENST00000465471 RALBP11234 206 aa20■□□□□ 0.79
SKA3-205ENST00000465471 ATP1B2P14415 290 aaPredicted RBP20■□□□□ 0.79
SKA3-205ENST00000465471 RPL21P46778 160 aaKnown RBP20■□□□□ 0.79
SKA3-205ENST00000465471 ARCN1P48444 511 aaKnown RBP20■□□□□ 0.79
SKA3-205ENST00000465471 PRLHRP49683 370 aa20■□□□□ 0.79
SKA3-205ENST00000465471 TUBB2AQ13885 445 aa20■□□□□ 0.79
SKA3-205ENST00000465471 SEMA3AQ14563 771 aa20■□□□□ 0.79
SKA3-205ENST00000465471 PERM1Q5SV97 790 aa20■□□□□ 0.79
SKA3-205ENST00000465471 CES3Q6UWW8 571 aa20■□□□□ 0.79
SKA3-205ENST00000465471 XKR5Q6UX68 686 aa20■□□□□ 0.79
SKA3-205ENST00000465471 CERS6Q6ZMG9 384 aa20■□□□□ 0.79
SKA3-205ENST00000465471 TAS2R42Q7RTR8 314 aa20■□□□□ 0.79
SKA3-205ENST00000465471 EFL1Q7Z2Z2 1120 aaKnown RBP20■□□□□ 0.79
SKA3-205ENST00000465471 SFRP1Q8N474 314 aa20■□□□□ 0.79
SKA3-205ENST00000465471 OR6P1Q8NGX9 317 aa20■□□□□ 0.79
SKA3-205ENST00000465471 PATE1Q8WXA2 126 aa20■□□□□ 0.79
SKA3-205ENST00000465471 DCUN1D1Q96GG9 259 aa20■□□□□ 0.79
SKA3-205ENST00000465471 TRIM56Q9BRZ2 755 aaKnown RBP20■□□□□ 0.79
SKA3-205ENST00000465471 ERP44Q9BS26 406 aa20■□□□□ 0.79
SKA3-205ENST00000465471 TUBB2BQ9BVA1 445 aa20■□□□□ 0.79
SKA3-205ENST00000465471 NUDT21O43809 227 aaKnown RBP19.99■□□□□ 0.79
SKA3-205ENST00000465471 POP7O75817 140 aaKnown RBP19.99■□□□□ 0.79
SKA3-205ENST00000465471 ITGA8P53708 1063 aa19.99■□□□□ 0.79
SKA3-205ENST00000465471 MRPS25P82663 173 aaKnown RBP19.99■□□□□ 0.79
SKA3-205ENST00000465471 CBLBQ13191 982 aa19.99■□□□□ 0.79
SKA3-205ENST00000465471 NR1D2Q14995 579 aa19.99■□□□□ 0.79
SKA3-205ENST00000465471 SMAD1Q15797 465 aaKnown RBP19.99■□□□□ 0.79
SKA3-205ENST00000465471 ZNF658BQ4V348 819 aaPredicted RBP19.99■□□□□ 0.79
SKA3-205ENST00000465471 MSS51Q4VC12 460 aa19.99■□□□□ 0.79
SKA3-205ENST00000465471 FNBP1LQ5T0N5 605 aa19.99■□□□□ 0.79
SKA3-205ENST00000465471 LYPLAL1Q5VWZ2 237 aa19.99■□□□□ 0.79
SKA3-205ENST00000465471 WASH2PQ6VEQ5 465 aa19.99■□□□□ 0.79
SKA3-205ENST00000465471 DET1Q7L5Y6 550 aa19.99■□□□□ 0.79
SKA3-205ENST00000465471 ZNF438Q7Z4V0 828 aa19.99■□□□□ 0.79
SKA3-205ENST00000465471 AMZ2Q86W34 360 aa19.99■□□□□ 0.79
SKA3-205ENST00000465471 BEND7Q8N7W2 519 aaPredicted RBP19.99■□□□□ 0.79
SKA3-205ENST00000465471 KIF18AQ8NI77 898 aa19.99■□□□□ 0.79
SKA3-205ENST00000465471 NAT14Q8WUY8 206 aa19.99■□□□□ 0.79
SKA3-205ENST00000465471 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.99■□□□□ 0.79
SKA3-205ENST00000465471 WASH6PQ9NQA3 447 aa19.99■□□□□ 0.79
SKA3-205ENST00000465471 CATSPERZQ9NTU4 200 aa19.99■□□□□ 0.79
SKA3-205ENST00000465471 SAMD15Q9P1V8 674 aa19.99■□□□□ 0.79
SKA3-205ENST00000465471 MARCH4Q9P2E8 410 aaPredicted RBP19.99■□□□□ 0.79
SKA3-205ENST00000465471 ZCWPW2A0A1B0GU75 182 aa19.98■□□□□ 0.79
SKA3-205ENST00000465471 CPED1A4D0V7 1026 aa19.98■□□□□ 0.79
SKA3-205ENST00000465471 KLHL33A6NCF5 533 aa19.98■□□□□ 0.79
SKA3-205ENST00000465471 AP2A2O94973 939 aa19.98■□□□□ 0.79
SKA3-205ENST00000465471 F3P13726 295 aa19.98■□□□□ 0.79
SKA3-205ENST00000465471 PNLIPP16233 465 aa19.98■□□□□ 0.79
SKA3-205ENST00000465471 GLB1P16278 677 aa19.98■□□□□ 0.79
SKA3-205ENST00000465471 NSG1P42857 185 aa19.98■□□□□ 0.79
SKA3-205ENST00000465471 MAZP56270 477 aaKnown RBP19.98■□□□□ 0.79
SKA3-205ENST00000465471 E2F1Q01094 437 aa19.98■□□□□ 0.79
SKA3-205ENST00000465471 ANKRD20A4Q4UJ75 823 aa19.98■□□□□ 0.79
SKA3-205ENST00000465471 FASTKD1Q53R41 847 aaKnown RBP19.98■□□□□ 0.79
SKA3-205ENST00000465471 AGAP9Q5VTM2 703 aa19.98■□□□□ 0.79
SKA3-205ENST00000465471 DUPD1Q68J44 220 aa19.98■□□□□ 0.79
SKA3-205ENST00000465471 CASC4Q6P4E1 433 aa19.98■□□□□ 0.79
SKA3-205ENST00000465471 IYDQ6PHW0 289 aa19.98■□□□□ 0.79
SKA3-205ENST00000465471 DHRS13Q6UX07 377 aa19.98■□□□□ 0.79
SKA3-205ENST00000465471 ARL14Q8N4G2 192 aa19.98■□□□□ 0.79
SKA3-205ENST00000465471 CCDC74AQ96AQ1 378 aa19.98■□□□□ 0.79
SKA3-205ENST00000465471 FCRL3Q96P31 734 aaPredicted RBP19.98■□□□□ 0.79
SKA3-205ENST00000465471 TRIM31Q9BZY9 425 aa19.98■□□□□ 0.79
SKA3-205ENST00000465471 RABGEF1Q9UJ41 708 aa19.98■□□□□ 0.79
SKA3-205ENST00000465471 SNX24Q9Y343 169 aa19.98■□□□□ 0.79
SKA3-205ENST00000465471 RNF215Q9Y6U7 377 aa19.98■□□□□ 0.79
SKA3-205ENST00000465471 FAM221BA6H8Z2 402 aa19.97■□□□□ 0.79
SKA3-205ENST00000465471 MGAT4DA6NG13 374 aa19.97■□□□□ 0.79
SKA3-205ENST00000465471 NDC80O14777 642 aa19.97■□□□□ 0.79
SKA3-205ENST00000465471 CD3EAPO15446 510 aaKnown RBP19.97■□□□□ 0.79
SKA3-205ENST00000465471 USP1O94782 785 aa19.97■□□□□ 0.79
SKA3-205ENST00000465471 VAPBO95292 243 aa19.97■□□□□ 0.79
SKA3-205ENST00000465471 TOP3BO95985 862 aaKnown RBP19.97■□□□□ 0.79
SKA3-205ENST00000465471 BRAFP15056 766 aa19.97■□□□□ 0.79
SKA3-205ENST00000465471 VCLP18206 1134 aa19.97■□□□□ 0.79
SKA3-205ENST00000465471 FASLGP48023 281 aa19.97■□□□□ 0.79
SKA3-205ENST00000465471 SHC2P98077 582 aa19.97■□□□□ 0.79
SKA3-205ENST00000465471 INSM1Q01101 510 aaPredicted RBP19.97■□□□□ 0.79
SKA3-205ENST00000465471 DHX9Q08211 1270 aaKnown RBP19.97■□□□□ 0.79
SKA3-205ENST00000465471 FOXC1Q12948 553 aa19.97■□□□□ 0.79
SKA3-205ENST00000465471 DNAJC21Q5F1R6 531 aaKnown RBP19.97■□□□□ 0.79
SKA3-205ENST00000465471 AARS2Q5JTZ9 985 aaKnown RBP19.97■□□□□ 0.79
SKA3-205ENST00000465471 ABRAXAS1Q6UWZ7 409 aa19.97■□□□□ 0.79
SKA3-205ENST00000465471 FAM83HQ6ZRV2 1179 aaPredicted RBP19.97■□□□□ 0.79
SKA3-205ENST00000465471 CHCHD4Q8N4Q1 142 aa19.97■□□□□ 0.79
SKA3-205ENST00000465471 CLDN19Q8N6F1 224 aa19.97■□□□□ 0.79
SKA3-205ENST00000465471 OR2L2Q8NH16 312 aa19.97■□□□□ 0.79
SKA3-205ENST00000465471 SLC37A2Q8TED4 501 aa19.97■□□□□ 0.79
SKA3-205ENST00000465471 ZNF669Q96BR6 464 aaPredicted RBP19.97■□□□□ 0.79
SKA3-205ENST00000465471 STAMBPL1Q96FJ0 436 aa19.97■□□□□ 0.79
SKA3-205ENST00000465471 CCDC3Q9BQI4 270 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms