RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 PCNX2A6NKB5 2137 aa11.71□□□□□ -0.53
APTX-213ENST00000465003 AP3B1O00203 1094 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 DYNC1I1O14576 645 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 CHUKO15111 745 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 CD3EAPO15446 510 aaKnown RBP11.7□□□□□ -0.54
APTX-213ENST00000465003 FLRT2O43155 660 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 DFNA5O60443 496 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 FOXD2O60548 495 aaPredicted RBP11.7□□□□□ -0.54
APTX-213ENST00000465003 CBFA2T3O75081 653 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 ANXA6P08133 673 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 ZNF883P0CG24 379 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 PGAM1P18669 254 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 GRK6P43250 576 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 CARSP49589 748 aaKnown RBP11.7□□□□□ -0.54
APTX-213ENST00000465003 LIMK1P53667 647 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 CSE1LP55060 971 aaKnown RBP11.7□□□□□ -0.54
APTX-213ENST00000465003 ARHGAP8P85298 464 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 ILF3Q12906 894 aaKnown RBP eCLIP11.7□□□□□ -0.54
APTX-213ENST00000465003 CTBP1Q13363 440 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 GTF2H3Q13889 308 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 NFE2L1Q14494 772 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 HSP90AA5PQ58FG0 334 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 DNAJC21Q5F1R6 531 aaKnown RBP11.7□□□□□ -0.54
APTX-213ENST00000465003 ZNF470Q6ECI4 717 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 FAM83HQ6ZRV2 1179 aaPredicted RBP11.7□□□□□ -0.54
APTX-213ENST00000465003 NLRP9Q7RTR0 991 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 LRRTM4Q86VH4 590 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 ZNF761Q86XN6 746 aaPredicted RBP11.7□□□□□ -0.54
APTX-213ENST00000465003 SLC35F3Q8IY50 421 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 KYQ8NBH2 561 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 LKAAEAR1Q8TD35 194 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 DCUN1D1Q96GG9 259 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 SCARF2Q96GP6 870 aaPredicted RBP11.7□□□□□ -0.54
APTX-213ENST00000465003 APOLD1Q96LR9 279 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 MRM3Q9HC36 420 aaKnown RBP11.7□□□□□ -0.54
APTX-213ENST00000465003 PPANQ9NQ55 473 aaKnown RBP11.7□□□□□ -0.54
APTX-213ENST00000465003 PRDM8Q9NQV8 689 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 ZDHHC18Q9NUE0 388 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 TAAR2Q9P1P5 351 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 TBC1D29Q9UFV1 150 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 ZC3H7BQ9UGR2 993 aaKnown RBP11.7□□□□□ -0.54
APTX-213ENST00000465003 PSMD13Q9UNM6 376 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 CRYL1Q9Y2S2 319 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 TEX264Q9Y6I9 313 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 FREM2Q5SZK8 3169 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 LY6G6EA0A0G2JKS1 128 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 PRAMEF33A0A0G2JMD5 474 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 UBA6A0AVT1 1052 aaPredicted RBP11.7□□□□□ -0.54
APTX-213ENST00000465003 LMO7DNF2Z398 122 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 USP1O94782 785 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 PSMA3P25788 255 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 ECHS1P30084 290 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 SSTR1P30872 391 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 MAZP56270 477 aaKnown RBP11.7□□□□□ -0.54
APTX-213ENST00000465003 MPP1Q00013 466 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 SLC14A1Q13336 389 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 HLTFQ14527 1009 aaKnown RBP eCLIP11.7□□□□□ -0.54
APTX-213ENST00000465003 SUZ12Q15022 739 aaKnown RBP11.7□□□□□ -0.54
APTX-213ENST00000465003 KIAA0930Q6ICG6 404 aaPredicted RBP11.7□□□□□ -0.54
APTX-213ENST00000465003 DBX2Q6ZNG2 339 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 PIP4P1Q86T03 277 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 KRT222Q8N1A0 295 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.7□□□□□ -0.54
APTX-213ENST00000465003 OR4C6Q8NH72 309 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 GPBAR1Q8TDU6 330 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 CNDP2Q96KP4 475 aaKnown RBP11.7□□□□□ -0.54
APTX-213ENST00000465003 FBXO6Q9NRD1 293 aaPredicted RBP11.7□□□□□ -0.54
APTX-213ENST00000465003 IARS2Q9NSE4 1012 aaKnown RBP11.7□□□□□ -0.54
APTX-213ENST00000465003 ZDHHC3Q9NYG2 299 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 TSR3Q9UJK0 312 aaKnown RBP11.7□□□□□ -0.54
APTX-213ENST00000465003 GPR34Q9UPC5 381 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 CFAP20Q9Y6A4 193 aaKnown RBP11.7□□□□□ -0.54
APTX-213ENST00000465003 U3KQA8 63 aa11.7□□□□□ -0.54
APTX-213ENST00000465003 ASXL3Q9C0F0 2248 aa11.69□□□□□ -0.54
APTX-213ENST00000465003 NEMP2A6NFY4 417 aa11.69□□□□□ -0.54
APTX-213ENST00000465003 YKT6O15498 198 aa11.69□□□□□ -0.54
APTX-213ENST00000465003 VEGFDO43915 354 aa11.69□□□□□ -0.54
APTX-213ENST00000465003 POP7O75817 140 aaKnown RBP11.69□□□□□ -0.54
APTX-213ENST00000465003 POLBP06746 335 aa11.69□□□□□ -0.54
APTX-213ENST00000465003 ATP1B2P14415 290 aaPredicted RBP11.69□□□□□ -0.54
APTX-213ENST00000465003 ZNF7P17097 686 aaPredicted RBP11.69□□□□□ -0.54
APTX-213ENST00000465003 PMLP29590 882 aa11.69□□□□□ -0.54
APTX-213ENST00000465003 SLC1A2P43004 574 aa11.69□□□□□ -0.54
APTX-213ENST00000465003 PGGT1BP53609 377 aa11.69□□□□□ -0.54
APTX-213ENST00000465003 EIF3BP55884 814 aaKnown RBP11.69□□□□□ -0.54
APTX-213ENST00000465003 LAMB3Q13751 1172 aa11.69□□□□□ -0.54
APTX-213ENST00000465003 GPR33Q49SQ1 333 aa11.69□□□□□ -0.54
APTX-213ENST00000465003 KCNMB4Q86W47 210 aa11.69□□□□□ -0.54
APTX-213ENST00000465003 SPDYE1Q8NFV5 336 aaPredicted RBP11.69□□□□□ -0.54
APTX-213ENST00000465003 ULK4Q96C45 1275 aa11.69□□□□□ -0.54
APTX-213ENST00000465003 ZCCHC2Q9C0B9 1178 aaKnown RBP11.69□□□□□ -0.54
APTX-213ENST00000465003 TRNAU1APQ9NX07 287 aaKnown RBP11.69□□□□□ -0.54
APTX-213ENST00000465003 NLGN3Q9NZ94 848 aa11.69□□□□□ -0.54
APTX-213ENST00000465003 SCHIP1Q9P0W5 487 aaPredicted RBP11.69□□□□□ -0.54
APTX-213ENST00000465003 FTSJ1Q9UET6 329 aa11.69□□□□□ -0.54
APTX-213ENST00000465003 RIMKLBQ9ULI2 386 aa11.69□□□□□ -0.54
APTX-213ENST00000465003 WDR37Q9Y2I8 494 aa11.69□□□□□ -0.54
APTX-213ENST00000465003 RP1P56715 2156 aa11.69□□□□□ -0.54
APTX-213ENST00000465003 CPED1A4D0V7 1026 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 OR52A4PA6NMU1 304 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms