RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 STXBP5Q5T5C0 1151 aa5.67□□□□□ -1.5
PTCD3-205ENST00000464541 STPG1Q5TH74 334 aa5.67□□□□□ -1.5
PTCD3-205ENST00000464541 MZT2BQ6NZ67 158 aa5.67□□□□□ -1.5
PTCD3-205ENST00000464541 C19orf48Q6RUI8 117 aa5.67□□□□□ -1.5
PTCD3-205ENST00000464541 ZNF852Q6ZMS4 543 aa5.67□□□□□ -1.5
PTCD3-205ENST00000464541 Q6ZTC4 211 aa5.67□□□□□ -1.5
PTCD3-205ENST00000464541 C1orf52Q8N6N3 182 aaKnown RBP5.67□□□□□ -1.5
PTCD3-205ENST00000464541 OR52I2Q8NH67 350 aa5.67□□□□□ -1.5
PTCD3-205ENST00000464541 GSDMBQ8TAX9 411 aa5.67□□□□□ -1.5
PTCD3-205ENST00000464541 FAM120BQ96EK7 910 aaKnown RBP5.67□□□□□ -1.5
PTCD3-205ENST00000464541 LINGO1Q96FE5 620 aa5.67□□□□□ -1.5
PTCD3-205ENST00000464541 GFI1Q99684 422 aa5.67□□□□□ -1.5
PTCD3-205ENST00000464541 TRMT61BQ9BVS5 477 aaKnown RBP5.67□□□□□ -1.5
PTCD3-205ENST00000464541 KRTAP2-2Q9BYT5 123 aa5.67□□□□□ -1.5
PTCD3-205ENST00000464541 VPS33BQ9H267 617 aa5.67□□□□□ -1.5
PTCD3-205ENST00000464541 ZFP57Q9NU63 452 aa5.67□□□□□ -1.5
PTCD3-205ENST00000464541 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.67□□□□□ -1.5
PTCD3-205ENST00000464541 A6NCN8 305 aa5.66□□□□□ -1.5
PTCD3-205ENST00000464541 AGAP14A8MT82 685 aa5.66□□□□□ -1.5
PTCD3-205ENST00000464541 DVL1O14640 695 aa5.66□□□□□ -1.5
PTCD3-205ENST00000464541 TSPAN9O75954 239 aa5.66□□□□□ -1.5
PTCD3-205ENST00000464541 IGKV3-20P01619 116 aa5.66□□□□□ -1.5
PTCD3-205ENST00000464541 CSF2RAP15509 400 aa5.66□□□□□ -1.5
PTCD3-205ENST00000464541 MARK3P27448 753 aa5.66□□□□□ -1.5
PTCD3-205ENST00000464541 CASP2P42575 452 aa5.66□□□□□ -1.5
PTCD3-205ENST00000464541 DVL1P1P54792 670 aaPredicted RBP5.66□□□□□ -1.5
PTCD3-205ENST00000464541 KRTAP10-9P60411 292 aa5.66□□□□□ -1.5
PTCD3-205ENST00000464541 RBBP5Q15291 538 aaKnown RBP5.66□□□□□ -1.5
PTCD3-205ENST00000464541 MEP1AQ16819 746 aa5.66□□□□□ -1.5
PTCD3-205ENST00000464541 DUSP28Q4G0W2 176 aa5.66□□□□□ -1.5
PTCD3-205ENST00000464541 SIRPB2Q5JXA9 342 aa5.66□□□□□ -1.5
PTCD3-205ENST00000464541 TRMT1LQ7Z2T5 733 aaKnown RBP5.66□□□□□ -1.5
PTCD3-205ENST00000464541 ZNF583Q96ND8 569 aa5.66□□□□□ -1.5
PTCD3-205ENST00000464541 SMC6Q96SB8 1091 aa5.66□□□□□ -1.5
PTCD3-205ENST00000464541 GAD1Q99259 594 aa5.66□□□□□ -1.5
PTCD3-205ENST00000464541 MAK16Q9BXY0 300 aaKnown RBP5.66□□□□□ -1.5
PTCD3-205ENST00000464541 RAD21L1Q9H4I0 556 aa5.66□□□□□ -1.5
PTCD3-205ENST00000464541 ZNF334Q9HCZ1 680 aaPredicted RBP5.66□□□□□ -1.5
PTCD3-205ENST00000464541 FAM118AQ9NWS6 357 aa5.66□□□□□ -1.5
PTCD3-205ENST00000464541 KLHL9Q9P2J3 617 aa5.66□□□□□ -1.5
PTCD3-205ENST00000464541 DNAJB4Q9UDY4 337 aa5.66□□□□□ -1.5
PTCD3-205ENST00000464541 YIPF1Q9Y548 306 aa5.66□□□□□ -1.5
PTCD3-205ENST00000464541 IGLV5-45A0A087WSX0 123 aa5.65□□□□□ -1.5
PTCD3-205ENST00000464541 TMEM178BH3BS89 294 aa5.65□□□□□ -1.5
PTCD3-205ENST00000464541 ZBTB43O43298 467 aa5.65□□□□□ -1.5
PTCD3-205ENST00000464541 PLPP2O43688 288 aa5.65□□□□□ -1.5
PTCD3-205ENST00000464541 MITFO75030 526 aaPredicted RBP5.65□□□□□ -1.5
PTCD3-205ENST00000464541 SELLP14151 372 aa5.65□□□□□ -1.5
PTCD3-205ENST00000464541 ALOX12P18054 663 aa5.65□□□□□ -1.5
PTCD3-205ENST00000464541 HOXD13P35453 343 aa5.65□□□□□ -1.5
PTCD3-205ENST00000464541 MC1RQ01726 317 aa5.65□□□□□ -1.5
PTCD3-205ENST00000464541 CREB5Q02930 508 aa5.65□□□□□ -1.5
PTCD3-205ENST00000464541 KCNC3Q14003 757 aa5.65□□□□□ -1.5
PTCD3-205ENST00000464541 RAB41Q5JT25 222 aa5.65□□□□□ -1.5
PTCD3-205ENST00000464541 ITPRIPL1Q6GPH6 555 aa5.65□□□□□ -1.5
PTCD3-205ENST00000464541 ZNF534Q76KX8 674 aa5.65□□□□□ -1.5
PTCD3-205ENST00000464541 SCYL3Q8IZE3 742 aa5.65□□□□□ -1.5
PTCD3-205ENST00000464541 LRRC59Q96AG4 307 aaKnown RBP5.65□□□□□ -1.5
PTCD3-205ENST00000464541 NSUN4Q96CB9 384 aaKnown RBP5.65□□□□□ -1.5
PTCD3-205ENST00000464541 TXLNGQ9NUQ3 528 aa5.65□□□□□ -1.5
PTCD3-205ENST00000464541 TAAR2Q9P1P5 351 aa5.65□□□□□ -1.5
PTCD3-205ENST00000464541 FAM72CH0Y354 149 aa5.64□□□□□ -1.51
PTCD3-205ENST00000464541 PAX1P15863 534 aa5.64□□□□□ -1.51
PTCD3-205ENST00000464541 MCCP23508 829 aa5.64□□□□□ -1.51
PTCD3-205ENST00000464541 HYAL1Q12794 435 aa5.64□□□□□ -1.51
PTCD3-205ENST00000464541 IRF3Q14653 427 aa5.64□□□□□ -1.51
PTCD3-205ENST00000464541 FAM72AQ5TYM5 149 aa5.64□□□□□ -1.51
PTCD3-205ENST00000464541 FAM205BPQ63HN1 556 aa5.64□□□□□ -1.51
PTCD3-205ENST00000464541 TMEM198Q66K66 360 aa5.64□□□□□ -1.51
PTCD3-205ENST00000464541 FAM72DQ6L9T8 149 aa5.64□□□□□ -1.51
PTCD3-205ENST00000464541 PACS1Q6VY07 963 aa5.64□□□□□ -1.51
PTCD3-205ENST00000464541 RAD9BQ6WBX8 426 aa5.64□□□□□ -1.51
PTCD3-205ENST00000464541 FAM72BQ86X60 149 aa5.64□□□□□ -1.51
PTCD3-205ENST00000464541 CEP97Q8IW35 865 aa5.64□□□□□ -1.51
PTCD3-205ENST00000464541 SLC24A4Q8NFF2 622 aa5.64□□□□□ -1.51
PTCD3-205ENST00000464541 GHITMQ9H3K2 345 aa5.64□□□□□ -1.51
PTCD3-205ENST00000464541 HAUS2Q9NVX0 235 aa5.64□□□□□ -1.51
PTCD3-205ENST00000464541 PAG1Q9NWQ8 432 aa5.64□□□□□ -1.51
PTCD3-205ENST00000464541 SUCLA2Q9P2R7 463 aaPredicted RBP5.64□□□□□ -1.51
PTCD3-205ENST00000464541 SEC63Q9UGP8 760 aaKnown RBP5.64□□□□□ -1.51
PTCD3-205ENST00000464541 AMACRQ9UHK6 382 aa5.64□□□□□ -1.51
PTCD3-205ENST00000464541 A0A0G2JNG1 304 aa5.63□□□□□ -1.51
PTCD3-205ENST00000464541 A0A1W2PR77 199 aa5.63□□□□□ -1.51
PTCD3-205ENST00000464541 LRRC72A6NJI9 287 aa5.63□□□□□ -1.51
PTCD3-205ENST00000464541 H0YIN7 160 aa5.63□□□□□ -1.51
PTCD3-205ENST00000464541 J3QR06 171 aa5.63□□□□□ -1.51
PTCD3-205ENST00000464541 NDUFS4O43181 175 aa5.63□□□□□ -1.51
PTCD3-205ENST00000464541 MFAP4P55083 255 aa5.63□□□□□ -1.51
PTCD3-205ENST00000464541 KIR2DS5Q14953 304 aa5.63□□□□□ -1.51
PTCD3-205ENST00000464541 MEA1Q16626 185 aa5.63□□□□□ -1.51
PTCD3-205ENST00000464541 ASPRV1Q53RT3 343 aa5.63□□□□□ -1.51
PTCD3-205ENST00000464541 SPATA1Q5VX52 437 aa5.63□□□□□ -1.51
PTCD3-205ENST00000464541 GALNT13Q8IUC8 556 aa5.63□□□□□ -1.51
PTCD3-205ENST00000464541 SMPDL3BQ92485 455 aa5.63□□□□□ -1.51
PTCD3-205ENST00000464541 SAT2Q96F10 170 aaPredicted RBP5.63□□□□□ -1.51
PTCD3-205ENST00000464541 SLC22A12Q96S37 553 aa5.63□□□□□ -1.51
PTCD3-205ENST00000464541 BARD1Q99728 777 aaKnown RBP5.63□□□□□ -1.51
PTCD3-205ENST00000464541 SRSF8Q9BRL6 282 aaKnown RBP5.63□□□□□ -1.51
PTCD3-205ENST00000464541 HRH4Q9H3N8 390 aa5.63□□□□□ -1.51
PTCD3-205ENST00000464541 NSMCE4AQ9NXX6 385 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms