RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 PAFAH2Q99487 392 aa4.13□□□□□ -1.75
USP9X-204ENST00000463829 DDOQ99489 341 aa4.13□□□□□ -1.75
USP9X-204ENST00000463829 NEURL2Q9BR09 285 aa4.13□□□□□ -1.75
USP9X-204ENST00000463829 RTN4RQ9BZR6 473 aa4.13□□□□□ -1.75
USP9X-204ENST00000463829 SLCO5A1Q9H2Y9 848 aa4.13□□□□□ -1.75
USP9X-204ENST00000463829 PLSCR4Q9NRQ2 329 aa4.13□□□□□ -1.75
USP9X-204ENST00000463829 RCC2Q9P258 522 aaKnown RBP4.13□□□□□ -1.75
USP9X-204ENST00000463829 CHORDC1Q9UHD1 332 aaPredicted RBP4.13□□□□□ -1.75
USP9X-204ENST00000463829 AMACRQ9UHK6 382 aa4.13□□□□□ -1.75
USP9X-204ENST00000463829 B3GALT5Q9Y2C3 310 aa4.13□□□□□ -1.75
USP9X-204ENST00000463829 OR2W1Q9Y3N9 320 aa4.13□□□□□ -1.75
USP9X-204ENST00000463829 TTLL3Q9Y4R7 772 aa4.13□□□□□ -1.75
USP9X-204ENST00000463829 SMTNL1A8MU46 457 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 ANKRD66B4E2M5 251 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 TMEM189-UBE2V1I3L0A0 370 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 TULP2O00295 520 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 ADAMDEC1O15204 470 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 ZNHIT1O43257 154 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 FIBPO43427 364 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 BUD23O43709 281 aaKnown RBP4.12□□□□□ -1.75
USP9X-204ENST00000463829 ERAL1O75616 437 aaKnown RBP4.12□□□□□ -1.75
USP9X-204ENST00000463829 FAM106CPP0CH98 169 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 NR2F1P10589 423 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 CDH1P12830 882 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 PRLRP16471 622 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 ITGA2P17301 1181 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 TRIM21P19474 475 aaKnown RBP4.12□□□□□ -1.75
USP9X-204ENST00000463829 LMAN1P49257 510 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 HSD17B4P51659 736 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 ARSEP51690 589 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 IFI35P80217 286 aaPredicted RBP4.12□□□□□ -1.75
USP9X-204ENST00000463829 TMF1P82094 1093 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 PLIN5Q00G26 463 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 POU3F1Q03052 451 aaPredicted RBP4.12□□□□□ -1.75
USP9X-204ENST00000463829 GAGE2BQ13066 116 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 UBE2V1Q13404 147 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 KRT33BQ14525 404 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 GAGE2EQ4V326 116 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 MFSD4BQ5TF39 518 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 GAGE2AQ6NT46 116 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 PLEKHM3Q6ZWE6 761 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 INTS8Q75QN2 995 aaKnown RBP4.12□□□□□ -1.75
USP9X-204ENST00000463829 ZNF534Q76KX8 674 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 GALNT5Q7Z7M9 940 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 ADGRA1Q86SQ6 560 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 AACSQ86V21 672 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 EXOC3L1Q86VI1 746 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 SCML4Q8N228 414 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 MUC20Q8N307 709 aaPredicted RBP4.12□□□□□ -1.75
USP9X-204ENST00000463829 APPL2Q8NEU8 664 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 BBS10Q8TAM1 723 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 TMEM255BQ8WV15 326 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 NEUROD6Q96NK8 337 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 HGH1Q9BTY7 390 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 CSTL1Q9H114 145 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 FKRPQ9H9S5 495 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.12□□□□□ -1.75
USP9X-204ENST00000463829 GAGE2DQ9UEU5 116 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 RALYQ9UKM9 306 aaKnown RBP4.12□□□□□ -1.75
USP9X-204ENST00000463829 PCDHGA5Q9Y5G8 931 aa4.12□□□□□ -1.75
USP9X-204ENST00000463829 ZCWPW2A0A1B0GU75 182 aa4.11□□□□□ -1.75
USP9X-204ENST00000463829 ASPDHA6ND91 283 aa4.11□□□□□ -1.75
USP9X-204ENST00000463829 OR5K3A6NET4 321 aa4.11□□□□□ -1.75
USP9X-204ENST00000463829 GLOD5A6NK44 160 aa4.11□□□□□ -1.75
USP9X-204ENST00000463829 WDR1O75083 606 aa4.11□□□□□ -1.75
USP9X-204ENST00000463829 HSP90AA1P07900 732 aaKnown RBP4.11□□□□□ -1.75
USP9X-204ENST00000463829 AKR1B1P15121 316 aa4.11□□□□□ -1.75
USP9X-204ENST00000463829 NMBRP28336 390 aa4.11□□□□□ -1.75
USP9X-204ENST00000463829 TERF1P54274 439 aa4.11□□□□□ -1.75
USP9X-204ENST00000463829 CD81P60033 236 aa4.11□□□□□ -1.75
USP9X-204ENST00000463829 TROAPQ12815 778 aa4.11□□□□□ -1.75
USP9X-204ENST00000463829 BAATQ14032 418 aaPredicted RBP4.11□□□□□ -1.75
USP9X-204ENST00000463829 BECN1Q14457 450 aa4.11□□□□□ -1.75
USP9X-204ENST00000463829 IGSF11Q5DX21 431 aa4.11□□□□□ -1.75
USP9X-204ENST00000463829 GPR139Q6DWJ6 353 aa4.11□□□□□ -1.75
USP9X-204ENST00000463829 OR7E24Q6IFN5 339 aa4.11□□□□□ -1.75
USP9X-204ENST00000463829 Q75L30 129 aa4.11□□□□□ -1.75
USP9X-204ENST00000463829 PRPF39Q86UA1 669 aaKnown RBP4.11□□□□□ -1.75
USP9X-204ENST00000463829 DNAAF5Q86Y56 855 aa4.11□□□□□ -1.75
USP9X-204ENST00000463829 GALNT13Q8IUC8 556 aa4.11□□□□□ -1.75
USP9X-204ENST00000463829 LINC00346Q8IVM7 164 aa4.11□□□□□ -1.75
USP9X-204ENST00000463829 C1orf52Q8N6N3 182 aaKnown RBP4.11□□□□□ -1.75
USP9X-204ENST00000463829 SYT2Q8N9I0 419 aaPredicted RBP4.11□□□□□ -1.75
USP9X-204ENST00000463829 RDM1Q8NG50 284 aa4.11□□□□□ -1.75
USP9X-204ENST00000463829 SECTM1Q8WVN6 248 aa4.11□□□□□ -1.75
USP9X-204ENST00000463829 PHF21AQ96BD5 680 aa4.11□□□□□ -1.75
USP9X-204ENST00000463829 MRPL1Q9BYD6 325 aaKnown RBP4.11□□□□□ -1.75
USP9X-204ENST00000463829 SPATC1LQ9H0A9 340 aa4.11□□□□□ -1.75
USP9X-204ENST00000463829 KCNK15Q9H427 330 aa4.11□□□□□ -1.75
USP9X-204ENST00000463829 EVA1AQ9H8M9 152 aa4.11□□□□□ -1.75
USP9X-204ENST00000463829 CHMP1AQ9HD42 196 aaPredicted RBP4.11□□□□□ -1.75
USP9X-204ENST00000463829 KLHL1Q9NR64 748 aa4.11□□□□□ -1.75
USP9X-204ENST00000463829 ANKEF1Q9NU02 776 aa4.11□□□□□ -1.75
USP9X-204ENST00000463829 TAS2R14Q9NYV8 317 aa4.11□□□□□ -1.75
USP9X-204ENST00000463829 MORF4L1Q9UBU8 362 aa4.11□□□□□ -1.75
USP9X-204ENST00000463829 HACL1Q9UJ83 578 aa4.11□□□□□ -1.75
USP9X-204ENST00000463829 ZNF148Q9UQR1 794 aa4.11□□□□□ -1.75
USP9X-204ENST00000463829 DLGAP4Q9Y2H0 992 aa4.11□□□□□ -1.75
USP9X-204ENST00000463829 YIPF1Q9Y548 306 aa4.11□□□□□ -1.75
USP9X-204ENST00000463829 SYNDIG1LA6NDD5 238 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms