RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 ATP4BP51164 291 aa9.82□□□□□ -0.84
PTPRD-207ENST00000463477 ZNF235Q14590 738 aa9.82□□□□□ -0.84
PTPRD-207ENST00000463477 MAPRE2Q15555 327 aa9.82□□□□□ -0.84
PTPRD-207ENST00000463477 ZNF789Q5FWF6 425 aa9.82□□□□□ -0.84
PTPRD-207ENST00000463477 ZFP1Q6P2D0 407 aa9.82□□□□□ -0.84
PTPRD-207ENST00000463477 CHST9Q7L1S5 443 aa9.82□□□□□ -0.84
PTPRD-207ENST00000463477 SNX32Q86XE0 403 aa9.82□□□□□ -0.84
PTPRD-207ENST00000463477 AHI1Q8N157 1196 aa9.82□□□□□ -0.84
PTPRD-207ENST00000463477 CFAP52Q8N1V2 620 aa9.82□□□□□ -0.84
PTPRD-207ENST00000463477 CCNYL1Q8N7R7 359 aa9.82□□□□□ -0.84
PTPRD-207ENST00000463477 SUMF1Q8NBK3 374 aa9.82□□□□□ -0.84
PTPRD-207ENST00000463477 TSTD1Q8NFU3 115 aa9.82□□□□□ -0.84
PTPRD-207ENST00000463477 RHEBL1Q8TAI7 183 aa9.82□□□□□ -0.84
PTPRD-207ENST00000463477 WFDC5Q8TCV5 224 aa9.82□□□□□ -0.84
PTPRD-207ENST00000463477 IFT43Q96FT9 208 aa9.82□□□□□ -0.84
PTPRD-207ENST00000463477 PSKH2Q96QS6 385 aa9.82□□□□□ -0.84
PTPRD-207ENST00000463477 HHIPQ96QV1 700 aa9.82□□□□□ -0.84
PTPRD-207ENST00000463477 TCF12Q99081 682 aa9.82□□□□□ -0.84
PTPRD-207ENST00000463477 ACOX2Q99424 681 aa9.82□□□□□ -0.84
PTPRD-207ENST00000463477 ECSITQ9BQ95 431 aa9.82□□□□□ -0.84
PTPRD-207ENST00000463477 OSBPL1AQ9BXW6 950 aa9.82□□□□□ -0.84
PTPRD-207ENST00000463477 EFCAB1Q9HAE3 211 aa9.82□□□□□ -0.84
PTPRD-207ENST00000463477 INTS10Q9NVR2 710 aaKnown RBP9.82□□□□□ -0.84
PTPRD-207ENST00000463477 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.82□□□□□ -0.84
PTPRD-207ENST00000463477 KIAA1522Q9P206 1035 aaPredicted RBP9.82□□□□□ -0.84
PTPRD-207ENST00000463477 SEPT3Q9UH03 358 aa9.82□□□□□ -0.84
PTPRD-207ENST00000463477 KIAA1549LQ6ZVL6 1849 aa9.82□□□□□ -0.84
PTPRD-207ENST00000463477 ZNF106Q9H2Y7 1883 aaKnown RBP9.81□□□□□ -0.84
PTPRD-207ENST00000463477 A0A1B0GVM2 712 aa9.81□□□□□ -0.84
PTPRD-207ENST00000463477 A0A1W2PQF6 199 aa9.81□□□□□ -0.84
PTPRD-207ENST00000463477 TCAF2A6NFQ2 919 aa9.81□□□□□ -0.84
PTPRD-207ENST00000463477 H0Y626 953 aa9.81□□□□□ -0.84
PTPRD-207ENST00000463477 CD3EAPO15446 510 aaKnown RBP9.81□□□□□ -0.84
PTPRD-207ENST00000463477 KIF1CO43896 1103 aaKnown RBP9.81□□□□□ -0.84
PTPRD-207ENST00000463477 CD9P21926 228 aa9.81□□□□□ -0.84
PTPRD-207ENST00000463477 CD70P32970 193 aa9.81□□□□□ -0.84
PTPRD-207ENST00000463477 ACVRL1P37023 503 aa9.81□□□□□ -0.84
PTPRD-207ENST00000463477 CCR10P46092 362 aa9.81□□□□□ -0.84
PTPRD-207ENST00000463477 PXNP49023 591 aaPredicted RBP9.81□□□□□ -0.84
PTPRD-207ENST00000463477 ARSDP51689 593 aa9.81□□□□□ -0.84
PTPRD-207ENST00000463477 EPHB1P54762 984 aa9.81□□□□□ -0.84
PTPRD-207ENST00000463477 OXCT1P55809 520 aa9.81□□□□□ -0.84
PTPRD-207ENST00000463477 GNA12Q03113 381 aa9.81□□□□□ -0.84
PTPRD-207ENST00000463477 CDH18Q13634 790 aa9.81□□□□□ -0.84
PTPRD-207ENST00000463477 SQLEQ14534 574 aa9.81□□□□□ -0.84
PTPRD-207ENST00000463477 PIGGQ5H8A4 983 aa9.81□□□□□ -0.84
PTPRD-207ENST00000463477 BNC2Q6ZN30 1099 aaPredicted RBP9.81□□□□□ -0.84
PTPRD-207ENST00000463477 ASCL5Q7RTU5 278 aa9.81□□□□□ -0.84
PTPRD-207ENST00000463477 KDELC2Q7Z4H8 507 aa9.81□□□□□ -0.84
PTPRD-207ENST00000463477 PTAR1Q7Z6K3 402 aaPredicted RBP9.81□□□□□ -0.84
PTPRD-207ENST00000463477 ISCA2Q86U28 154 aa9.81□□□□□ -0.84
PTPRD-207ENST00000463477 KBTBD2Q8IY47 623 aa9.81□□□□□ -0.84
PTPRD-207ENST00000463477 DSELQ8IZU8 1212 aa9.81□□□□□ -0.84
PTPRD-207ENST00000463477 CARNMT1Q8N4J0 409 aa9.81□□□□□ -0.84
PTPRD-207ENST00000463477 OR6P1Q8NGX9 317 aa9.81□□□□□ -0.84
PTPRD-207ENST00000463477 DLG3Q92796 817 aa9.81□□□□□ -0.84
PTPRD-207ENST00000463477 GATA6Q92908 595 aa9.81□□□□□ -0.84
PTPRD-207ENST00000463477 NDNQ99608 321 aa9.81□□□□□ -0.84
PTPRD-207ENST00000463477 CIPCQ9C0C6 399 aa9.81□□□□□ -0.84
PTPRD-207ENST00000463477 VCXQ9H320 206 aa9.81□□□□□ -0.84
PTPRD-207ENST00000463477 GSTO2Q9H4Y5 243 aa9.81□□□□□ -0.84
PTPRD-207ENST00000463477 ZDHHC4Q9NPG8 344 aa9.81□□□□□ -0.84
PTPRD-207ENST00000463477 MRPL40Q9NQ50 206 aaKnown RBP9.81□□□□□ -0.84
PTPRD-207ENST00000463477 C6orf203Q9P0P8 240 aaPredicted RBP9.81□□□□□ -0.84
PTPRD-207ENST00000463477 SARDHQ9UL12 918 aa9.81□□□□□ -0.84
PTPRD-207ENST00000463477 COPG1Q9Y678 874 aaKnown RBP9.81□□□□□ -0.84
PTPRD-207ENST00000463477 STON1Q9Y6Q2 735 aa9.81□□□□□ -0.84
PTPRD-207ENST00000463477 OTOGLQ3ZCN5 2332 aa9.81□□□□□ -0.84
PTPRD-207ENST00000463477 ILVBLA1L0T0 632 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 MAGEA13PA6NCF6 341 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 PRR23AA6NEV1 266 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 WASH3PC4AMC7 463 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 NEMP1O14524 444 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 MUSKO15146 869 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 KDELR3O43731 214 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 SMIM24O75264 130 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 CLDN11O75508 207 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 CRTAMO95727 393 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 JUNP05412 331 aaKnown RBP9.8□□□□□ -0.84
PTPRD-207ENST00000463477 FGF4P08620 206 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 HOXB2P14652 356 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 POLR2EP19388 210 aaKnown RBP9.8□□□□□ -0.84
PTPRD-207ENST00000463477 CR2P20023 1033 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 IL12RB1P42701 662 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 NUDT2P50583 147 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 STC1P52823 247 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 PLK1P53350 603 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 PGGT1BP53609 377 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 CDKN2DP55273 166 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 LMAN2Q12907 356 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 CDC16Q13042 620 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 STX5Q13190 355 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 PTK2BQ14289 1009 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 ZNF234Q14588 700 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 ZNF423Q2M1K9 1284 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 TMEM207Q6UWW9 146 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 ZNF783Q6ZMS7 281 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 SDCCAG8Q86SQ7 713 aaPredicted RBP9.8□□□□□ -0.84
PTPRD-207ENST00000463477 CUZD1Q86UP6 607 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 ZNF354CQ86Y25 554 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms