RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 RAB33BQ9H082 229 aa19.45■□□□□ 0.7
VARS-221ENST00000463184 SLC40A1Q9NP59 571 aa19.45■□□□□ 0.7
VARS-221ENST00000463184 PADI1Q9ULC6 663 aa19.45■□□□□ 0.7
VARS-221ENST00000463184 PCDHGA6Q9Y5G7 932 aa19.45■□□□□ 0.7
VARS-221ENST00000463184 SPAG6O75602 509 aa19.44■□□□□ 0.7
VARS-221ENST00000463184 CDK14O94921 469 aa19.44■□□□□ 0.7
VARS-221ENST00000463184 FURINP09958 794 aa19.44■□□□□ 0.7
VARS-221ENST00000463184 BRAFP15056 766 aa19.44■□□□□ 0.7
VARS-221ENST00000463184 IDSP22304 550 aa19.44■□□□□ 0.7
VARS-221ENST00000463184 KDELR1P24390 212 aa19.44■□□□□ 0.7
VARS-221ENST00000463184 RPL10P27635 214 aaKnown RBP19.44■□□□□ 0.7
VARS-221ENST00000463184 CDK18Q07002 472 aa19.44■□□□□ 0.7
VARS-221ENST00000463184 ATCAYQ86WG3 371 aa19.44■□□□□ 0.7
VARS-221ENST00000463184 PPP1R3BQ86XI6 285 aa19.44■□□□□ 0.7
VARS-221ENST00000463184 ZNF547Q8IVP9 402 aa19.44■□□□□ 0.7
VARS-221ENST00000463184 CCDC170Q8IYT3 715 aa19.44■□□□□ 0.7
VARS-221ENST00000463184 RSC1A1Q92681 617 aa19.44■□□□□ 0.7
VARS-221ENST00000463184 CXorf40BQ96DE9 158 aa19.44■□□□□ 0.7
VARS-221ENST00000463184 IMP4Q96G21 291 aaKnown RBP19.44■□□□□ 0.7
VARS-221ENST00000463184 ELMO2Q96JJ3 720 aa19.44■□□□□ 0.7
VARS-221ENST00000463184 SRPK1Q96SB4 655 aaKnown RBP19.44■□□□□ 0.7
VARS-221ENST00000463184 LNPEPQ9UIQ6 1025 aa19.44■□□□□ 0.7
VARS-221ENST00000463184 ZNF711Q9Y462 761 aa19.44■□□□□ 0.7
VARS-221ENST00000463184 KIF1CO43896 1103 aaKnown RBP19.43■□□□□ 0.7
VARS-221ENST00000463184 CREG1O75629 220 aa19.43■□□□□ 0.7
VARS-221ENST00000463184 RFPL1O75677 317 aa19.43■□□□□ 0.7
VARS-221ENST00000463184 H2AFZP0C0S5 128 aa19.43■□□□□ 0.7
VARS-221ENST00000463184 PIRTP0C851 137 aa19.43■□□□□ 0.7
VARS-221ENST00000463184 BPIP17213 487 aa19.43■□□□□ 0.7
VARS-221ENST00000463184 VCLP18206 1134 aa19.43■□□□□ 0.7
VARS-221ENST00000463184 NELFEP18615 380 aaKnown RBP19.43■□□□□ 0.7
VARS-221ENST00000463184 NR1D1P20393 614 aa19.43■□□□□ 0.7
VARS-221ENST00000463184 GSDMDP57764 484 aa19.43■□□□□ 0.7
VARS-221ENST00000463184 AP1B1Q10567 949 aa19.43■□□□□ 0.7
VARS-221ENST00000463184 GPR18Q14330 331 aa19.43■□□□□ 0.7
VARS-221ENST00000463184 SLC14A2Q15849 920 aa19.43■□□□□ 0.7
VARS-221ENST00000463184 ASB18Q6ZVZ8 466 aa19.43■□□□□ 0.7
VARS-221ENST00000463184 H2AFVQ71UI9 128 aa19.43■□□□□ 0.7
VARS-221ENST00000463184 PLD5Q8N7P1 536 aa19.43■□□□□ 0.7
VARS-221ENST00000463184 RAPGEF5Q92565 580 aa19.43■□□□□ 0.7
VARS-221ENST00000463184 RNF31Q96EP0 1072 aa19.43■□□□□ 0.7
VARS-221ENST00000463184 VPS35Q96QK1 796 aa19.43■□□□□ 0.7
VARS-221ENST00000463184 SLC25A51Q9H1U9 297 aa19.43■□□□□ 0.7
VARS-221ENST00000463184 PDE7BQ9NP56 450 aa19.43■□□□□ 0.7
VARS-221ENST00000463184 LHX9Q9NQ69 397 aa19.43■□□□□ 0.7
VARS-221ENST00000463184 SPTLC3Q9NUV7 552 aa19.43■□□□□ 0.7
VARS-221ENST00000463184 HEY1Q9Y5J3 304 aa19.43■□□□□ 0.7
VARS-221ENST00000463184 PIPSLA2A3N6 862 aa19.42■□□□□ 0.7
VARS-221ENST00000463184 CDC14CA4D256 554 aa19.42■□□□□ 0.7
VARS-221ENST00000463184 OR52A4PA6NMU1 304 aa19.42■□□□□ 0.7
VARS-221ENST00000463184 ZNF487B1APH4 448 aa19.42■□□□□ 0.7
VARS-221ENST00000463184 K7EM74 188 aa19.42■□□□□ 0.7
VARS-221ENST00000463184 MTSS1O43312 755 aa19.42■□□□□ 0.7
VARS-221ENST00000463184 KCNJ13O60928 360 aa19.42■□□□□ 0.7
VARS-221ENST00000463184 MTX2O75431 263 aa19.42■□□□□ 0.7
VARS-221ENST00000463184 SLC4A1P02730 911 aa19.42■□□□□ 0.7
VARS-221ENST00000463184 CYLC1P35663 651 aaPredicted RBP19.42■□□□□ 0.7
VARS-221ENST00000463184 PMS2P54278 862 aa19.42■□□□□ 0.7
VARS-221ENST00000463184 PDK1Q15118 436 aa19.42■□□□□ 0.7
VARS-221ENST00000463184 CCDC70Q6NSX1 233 aa19.42■□□□□ 0.7
VARS-221ENST00000463184 IRGCQ6NXR0 463 aa19.42■□□□□ 0.7
VARS-221ENST00000463184 FAM92BQ6ZTR7 304 aa19.42■□□□□ 0.7
VARS-221ENST00000463184 TADA1Q96BN2 335 aa19.42■□□□□ 0.7
VARS-221ENST00000463184 AGAP3Q96P47 875 aa19.42■□□□□ 0.7
VARS-221ENST00000463184 FCRL4Q96PJ5 515 aa19.42■□□□□ 0.7
VARS-221ENST00000463184 PSMG3-AS1Q96PY0 264 aa19.42■□□□□ 0.7
VARS-221ENST00000463184 TWSG1Q9GZX9 223 aa19.42■□□□□ 0.7
VARS-221ENST00000463184 SEMA5BQ9P283 1151 aa19.42■□□□□ 0.7
VARS-221ENST00000463184 TLK1Q9UKI8 766 aa19.42■□□□□ 0.7
VARS-221ENST00000463184 LRRK2Q5S007 2527 aa19.42■□□□□ 0.7
VARS-221ENST00000463184 C21orf140B9A014 251 aa19.41■□□□□ 0.7
VARS-221ENST00000463184 DRG2P55039 364 aaKnown RBP19.41■□□□□ 0.7
VARS-221ENST00000463184 TMEM115Q12893 351 aaPredicted RBP19.41■□□□□ 0.7
VARS-221ENST00000463184 DNASE1L3Q13609 305 aa19.41■□□□□ 0.7
VARS-221ENST00000463184 GTF2H3Q13889 308 aa19.41■□□□□ 0.7
VARS-221ENST00000463184 GSE1Q14687 1217 aa19.41■□□□□ 0.7
VARS-221ENST00000463184 PCSK7Q16549 785 aa19.41■□□□□ 0.7
VARS-221ENST00000463184 SLC9A4Q6AI14 798 aa19.41■□□□□ 0.7
VARS-221ENST00000463184 C11orf96Q7Z7L8 435 aa19.41■□□□□ 0.7
VARS-221ENST00000463184 BPHLQ86WA6 291 aaPredicted RBP19.41■□□□□ 0.7
VARS-221ENST00000463184 VSIG1Q86XK7 387 aa19.41■□□□□ 0.7
VARS-221ENST00000463184 APLFQ8IW19 511 aaPredicted RBP19.41■□□□□ 0.7
VARS-221ENST00000463184 BRSK1Q8TDC3 778 aa19.41■□□□□ 0.7
VARS-221ENST00000463184 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.41■□□□□ 0.7
VARS-221ENST00000463184 CTNNBL1Q8WYA6 563 aaPredicted RBP19.41■□□□□ 0.7
VARS-221ENST00000463184 SEC14L1Q92503 715 aa19.41■□□□□ 0.7
VARS-221ENST00000463184 UBXN4Q92575 508 aa19.41■□□□□ 0.7
VARS-221ENST00000463184 BAG1Q99933 345 aaPredicted RBP19.41■□□□□ 0.7
VARS-221ENST00000463184 MAK16Q9BXY0 300 aaKnown RBP19.41■□□□□ 0.7
VARS-221ENST00000463184 CEP41Q9BYV8 373 aa19.41■□□□□ 0.7
VARS-221ENST00000463184 RARRES3Q9UL19 164 aa19.41■□□□□ 0.7
VARS-221ENST00000463184 ZNF106Q9H2Y7 1883 aaKnown RBP19.41■□□□□ 0.7
VARS-221ENST00000463184 LRRD1A4D1F6 860 aa19.4■□□□□ 0.7
VARS-221ENST00000463184 LCA5LO95447 670 aa19.4■□□□□ 0.7
VARS-221ENST00000463184 NDST3O95803 873 aa19.4■□□□□ 0.7
VARS-221ENST00000463184 HALP42357 657 aa19.4■□□□□ 0.7
VARS-221ENST00000463184 MLLT10P55197 1068 aa19.4■□□□□ 0.7
VARS-221ENST00000463184 KHDC1Q4VXA5 237 aaKnown RBP19.4■□□□□ 0.7
VARS-221ENST00000463184 KLHL35Q6PF15 583 aa19.4■□□□□ 0.7
VARS-221ENST00000463184 TMEM135Q86UB9 458 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms