RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	CHUK	O15111	745 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	AVIL	O75366	819 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	GOT2	P00505	430 aa	Known RBP	9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	POLB	P06746	335 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	IDS	P22304	550 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	NPY2R	P49146	381 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	ETF1	P62495	437 aa	Known RBP	9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	CDK16	Q00536	496 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	DR1	Q01658	176 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	KCNJ11	Q14654	390 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	DBN1	Q16643	649 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	MAP9	Q49MG5	647 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	GPR33	Q49SQ1	333 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	PCID2	Q5JVF3	399 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	AFTPH	Q6ULP2	937 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	UNQ6494/PRO21346	Q6UXR6	183 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	CCNI2	Q6ZMN8	369 aa	Predicted RBP	9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	USP53	Q70EK8	1073 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	NLRP9	Q7RTR0	991 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	SPRED1	Q7Z699	444 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	AMZ2	Q86W34	360 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	CREG2	Q8IUH2	290 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	ZNF547	Q8IVP9	402 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	DTX3L	Q8TDB6	740 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	CPT1B	Q92523	772 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	ZNF592	Q92610	1267 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	CXorf40B	Q96DE9	158 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	ZNF778	Q96MU6	729 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	RANBP9	Q96S59	729 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	SLC38A3	Q99624	504 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	TIMM29	Q9BSF4	260 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	TRIM31	Q9BZY9	425 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	IL22	Q9GZX6	179 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	LRRN3	Q9H3W5	708 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	STN1	Q9H668	368 aa	Known RBP	9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	EPB41L5	Q9HCM4	733 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	SMOX	Q9NWM0	555 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	ZDHHC3	Q9NYG2	299 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	KCNK4	Q9NYG8	393 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	ANAPC5	Q9UJX4	755 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	MAD1L1	Q9Y6D9	718 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	AK5	Q9Y6K8	562 aa		9.46	□□□□□ -0.9
PSMD4-208	ENST00000462970	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	TRABD2B	A6NFA1	517 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	FANCG	O15287	622 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	PPM1D	O15297	605 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	ZW10	O43264	779 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	NUDT21	O43809	227 aa	Known RBP	9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	TMEM63A	O94886	807 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	F3	P13726	295 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	ACRV1	P26436	265 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	NMBR	P28336	390 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	HAL	P42357	657 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	B4GALNT1	Q00973	533 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	HHEX	Q03014	270 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	NFE2L1	Q14494	772 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	FASTKD1	Q53R41	847 aa	Known RBP	9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	PHF19	Q5T6S3	580 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	NKAIN2	Q5VXU1	208 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	IZUMO3	Q5VZ72	239 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	LRRC8B	Q6P9F7	803 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	IYD	Q6PHW0	289 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	SLC9B2	Q86UD5	537 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	PPIL6	Q8IXY8	311 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	PIANP	Q8IYJ0	282 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	MPP5	Q8N3R9	675 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	CLDN19	Q8N6F1	224 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	OR13J1	Q8NGT2	312 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	OR4L1	Q8NH43	312 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	HEXDC	Q8WVB3	486 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	ATXN7L3B	Q96GX2	97 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	AHCYL2	Q96HN2	611 aa	Known RBP	9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	ZNF514	Q96K75	400 aa	Predicted RBP	9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	KRT12	Q99456	494 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	TTC1	Q99614	292 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	TRIM51	Q9BSJ1	452 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	FOXP3	Q9BZS1	431 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	XAB2	Q9HCS7	855 aa	Known RBP	9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	CATSPERZ	Q9NTU4	200 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	PCDHB1	Q9Y5F3	818 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	ACACA	Q13085	2346 aa		9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	ANKRD11	Q6UB99	2663 aa	Predicted RBP	9.45	□□□□□ -0.9
PSMD4-208	ENST00000462970	KIR2DS5	A0A0G2JLQ3	304 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970		A0A0G2JNG1	304 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	MGAT4D	A6NG13	374 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	OR52A4P	A6NMU1	304 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970		D6RAR5	112 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970		H7C0S8	307 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	KIR2DS3	K7RE56	304 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	TTI1	O43156	1089 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	VAPB	O95292	243 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	VIP	P01282	170 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	SLC35G4	P0C7Q5	338 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	ATP1B2	P14415	290 aa	Predicted RBP	9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	ITGB6	P18564	788 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	FOXN2	P32314	431 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	PTGIR	P43119	386 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	CLCNKA	P51800	687 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	CSE1L	P55060	971 aa	Known RBP	9.44	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms