RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 OMDQ99983 421 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 SNRNP25Q9BV90 132 aaKnown RBP5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 SLC12A9Q9BXP2 914 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 SLC2A11Q9BYW1 496 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 MAGEB5Q9BZ81 275 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 ZYG11BQ9C0D3 744 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 YIPF3Q9GZM5 350 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 LACRTQ9GZZ8 138 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 VCXQ9H320 206 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 MTG2Q9H4K7 406 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 TMEM165Q9HC07 324 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 GPATCH2LQ9NWQ4 482 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 MPP6Q9NZW5 540 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 RNF14Q9UBS8 474 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 TRIM10Q9UDY6 481 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 ACSL6Q9UKU0 697 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 MKL2Q9ULH7 1088 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 SCML1Q9UN30 329 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 HYOU1Q9Y4L1 999 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 COMMD10Q9Y6G5 202 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 DUSP10Q9Y6W6 482 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 UNC13CQ8NB66 2214 aa5.99□□□□□ -1.45
SMARCC1-204ENST00000462198 SCN8AQ9UQD0 1980 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 C5orf60A6NFR6 353 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 DRGXA6NNA5 263 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 C10orf142B7Z368 130 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 FAM72CH0Y354 149 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 H3BRJ5 948 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 K7ESM1 405 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 SCAMP1O15126 338 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 CASC3O15234 703 aaKnown RBP5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 MID1O15344 667 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 NVLO15381 856 aaKnown RBP5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 FGF10O15520 208 aaPredicted RBP5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 TSPAN6O43657 245 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 RNASEH1O60930 286 aaKnown RBP5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 CLDN11O75508 207 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 TCEA3O75764 348 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 RNASEH2AO75792 299 aaKnown RBP5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 CNTN5O94779 1100 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 LRIG2O94898 1065 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 MOCS3O95396 460 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 FAM107AO95990 144 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 PRKCGP05129 697 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 RHOCP08134 193 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 GSTA1P08263 222 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 PABPC1P11940 636 aaKnown RBP5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 TCP1P17987 556 aaKnown RBP5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 CD33P20138 364 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 IL1R2P27930 398 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 EPHB2P29323 1055 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 OR1E1P30953 314 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 LSP1P33241 339 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 ARL4AP40617 200 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 SERPINB8P50452 374 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 CCNG1P51959 295 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 ZNF135P52742 658 aaPredicted RBP5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 CDH4P55283 916 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 TAS2R40P59535 323 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 TUBA1BP68363 451 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 NRG1Q02297 640 aaPredicted RBP5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 SLC25A11Q02978 314 aaKnown RBP5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 SULT2A1Q06520 285 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 CBX3Q13185 183 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 SPIDRQ14159 915 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 CA9Q16790 459 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 C5orf22Q49AR2 442 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 ALFQ53S48 1182 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 FAM72AQ5TYM5 149 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 FOXB2Q5VYV0 432 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 ARMC3Q5W041 872 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 TXNRD3NBQ6F5E7 133 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 FAM72DQ6L9T8 149 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 CCDC70Q6NSX1 233 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 C11orf63Q6NUN7 778 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 NCCRP1Q6ZVX7 275 aaPredicted RBP5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 TUBA1AQ71U36 451 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 RAB11FIP2Q7L804 512 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 EFL1Q7Z2Z2 1120 aaKnown RBP5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 MAATS1Q7Z4T9 603 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 HEATR4Q86WZ0 1026 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 FAM72BQ86X60 149 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 CIR1Q86X95 450 aaPredicted RBP5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 ZFAND4Q86XD8 727 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 CPNE8Q86YQ8 564 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 RHOT1Q8IXI2 618 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 SYCE1Q8N0S2 351 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 AHI1Q8N157 1196 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 RNF10Q8N5U6 811 aaKnown RBP5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 KCTD6Q8NC69 237 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 SPATA4Q8NEY3 305 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 VPS37AQ8NEZ2 397 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 OR14C36Q8NHC7 312 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 FIBINQ8TAL6 211 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 NSMCE1Q8WV22 266 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 ARL8AQ96BM9 186 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 LRRC45Q96CN5 670 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 CGREF1Q99674 301 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 CALN1Q9BXU9 219 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms