RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 RIMKLBQ9ULI2 386 aa13.07□□□□□ -0.32
RAB11FIP3-207ENST00000461009 RNF215Q9Y6U7 377 aa13.07□□□□□ -0.32
RAB11FIP3-207ENST00000461009 ASXL3Q9C0F0 2248 aa13.07□□□□□ -0.32
RAB11FIP3-207ENST00000461009 MROH6A6NGR9 719 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 H7C0S8 307 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 KIF2AO00139 706 aaPredicted RBP13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 TK2O00142 265 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 KMOO15229 486 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 GRID2O43424 1007 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 CDK14O94921 469 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 FUCA1P04066 466 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 RALBP11234 206 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 ZNF8P17098 575 aaPredicted RBP13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 MSH3P20585 1137 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 ITGALP20701 1170 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 ALDH4A1P30038 563 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 GRIA1P42261 906 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 MAGEA6P43360 314 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 GPR3P46089 330 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 PPM1FP49593 454 aaPredicted RBP13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 SESN2P58004 480 aaPredicted RBP13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 CTBSQ01459 385 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 MAP9Q49MG5 647 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 GPR33Q49SQ1 333 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 ARMC3Q5W041 872 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 KCTD16Q68DU8 428 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 LRRC8BQ6P9F7 803 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 NYAP1Q6ZVC0 841 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 CHST15Q7LFX5 561 aaPredicted RBP13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 SNX20Q7Z614 316 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 SPRED1Q7Z699 444 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 ADGRG6Q86SQ4 1221 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 LRRTM4Q86VH4 590 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 JAMLQ86YT9 394 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 KLHL7Q8IXQ5 586 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 LSM14AQ8ND56 463 aaKnown RBP13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 OR13C4Q8NGS5 318 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 PEX13Q92968 403 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 CRELD1Q96HD1 420 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 CDKN2AIPNLQ96HQ2 116 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 DNAJC1Q96KC8 554 aaKnown RBP13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 TTC1Q99614 292 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 FOXP3Q9BZS1 431 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 IL22Q9GZX6 179 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 SPATS2LQ9NUQ6 558 aaKnown RBP13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 WDR70Q9NW82 654 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 SMOXQ9NWM0 555 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 ASIC3Q9UHC3 531 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 RABGEF1Q9UJ41 708 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 CRLS1Q9UJA2 301 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 NEU2Q9Y3R4 380 aa13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 OAS3Q9Y6K5 1087 aaKnown RBP13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 ZFC3H1O60293 1989 aaKnown RBP13.06□□□□□ -0.32
RAB11FIP3-207ENST00000461009 RP1P56715 2156 aa13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 A0A1W2PQM1 296 aa13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 CDRT15L2A8MXV6 281 aa13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 CFAP99D6REC4 459 aa13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 CHUKO15111 745 aa13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 KCNJ13O60928 360 aa13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 CPNE6O95741 557 aa13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 MLNP12872 115 aa13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 PSMA3P25788 255 aa13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 MC4RP32245 332 aa13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 ACTR1BP42025 376 aa13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 TERF1P54274 439 aa13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 ACTR1AP61163 376 aa13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 XIAPP98170 497 aa13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 DR1Q01658 176 aa13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 NFATC2Q13469 925 aa13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 KCNJ11Q14654 390 aa13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 AMZ1Q400G9 498 aa13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 CCDC38Q502W7 563 aa13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 ZRANB3Q5FWF4 1079 aa13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 PHF19Q5T6S3 580 aa13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 TSTD2Q5T7W7 516 aa13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 TMEM164Q5U3C3 297 aa13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 TAS2R42Q7RTR8 314 aa13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 CLEC14AQ86T13 490 aa13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 MCUQ8NE86 351 aa13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 DCUN1D1Q96GG9 259 aa13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 ZNF514Q96K75 400 aaPredicted RBP13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 C16orf45Q96MC5 204 aaPredicted RBP13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 DPYSL5Q9BPU6 564 aa13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 ZMYND15Q9H091 742 aa13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 STN1Q9H668 368 aaKnown RBP13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 XAB2Q9HCS7 855 aaKnown RBP13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 ARFGAP3Q9NP61 516 aa13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 PCDHGA7Q9Y5G6 932 aa13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 DNMT3AQ9Y6K1 912 aaPredicted RBP13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 ZNF106Q9H2Y7 1883 aaKnown RBP13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 CACNA1GO43497 2377 aa13.05□□□□□ -0.32
RAB11FIP3-207ENST00000461009 MAGEB16A2A368 324 aa13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 GAPDHSO14556 408 aaPredicted RBP13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 MTX2O75431 263 aa13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 HOXB3P14651 431 aaPredicted RBP13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 SLC2A4P14672 509 aa13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 VCLP18206 1134 aa13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 AK4P27144 223 aaPredicted RBP13.04□□□□□ -0.32
RAB11FIP3-207ENST00000461009 AKT1P31749 480 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms