RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 TBC1D3DA0A087WVF3 549 aa16.61■□□□□ 0.25
NELFCD-201ENST00000460601 TBC1D3IA0A087WXS9 549 aa16.61■□□□□ 0.25
NELFCD-201ENST00000460601 TBC1D3EA0A087X179 549 aa16.61■□□□□ 0.25
NELFCD-201ENST00000460601 TBC1D3KA0A087X1G2 549 aa16.61■□□□□ 0.25
NELFCD-201ENST00000460601 NPEPPSL1A6NEC2 478 aa16.61■□□□□ 0.25
NELFCD-201ENST00000460601 TBC1D3FA6NER0 549 aaPredicted RBP16.61■□□□□ 0.25
NELFCD-201ENST00000460601 TBC1D3LB9A6J9 549 aa16.61■□□□□ 0.25
NELFCD-201ENST00000460601 DLX3O60479 287 aa16.61■□□□□ 0.25
NELFCD-201ENST00000460601 LYPLA1O75608 230 aaPredicted RBP16.61■□□□□ 0.25
NELFCD-201ENST00000460601 TBC1D3HP0C7X1 549 aa16.61■□□□□ 0.25
NELFCD-201ENST00000460601 ACADMP11310 421 aa16.61■□□□□ 0.25
NELFCD-201ENST00000460601 MSH3P20585 1137 aa16.61■□□□□ 0.25
NELFCD-201ENST00000460601 CCR7P32248 378 aa16.61■□□□□ 0.25
NELFCD-201ENST00000460601 TPMTP51580 245 aa16.61■□□□□ 0.25
NELFCD-201ENST00000460601 ACAP2Q15057 778 aa16.61■□□□□ 0.25
NELFCD-201ENST00000460601 TSNQ15631 228 aaKnown RBP16.61■□□□□ 0.25
NELFCD-201ENST00000460601 TTC31Q49AM3 519 aaPredicted RBP16.61■□□□□ 0.25
NELFCD-201ENST00000460601 TBC1D3GQ6DHY5 549 aa16.61■□□□□ 0.25
NELFCD-201ENST00000460601 TBC1D3CQ6IPX1 549 aa16.61■□□□□ 0.25
NELFCD-201ENST00000460601 RGS9BPQ6ZS82 235 aa16.61■□□□□ 0.25
NELFCD-201ENST00000460601 TRIM67Q6ZTA4 783 aa16.61■□□□□ 0.25
NELFCD-201ENST00000460601 OTOAQ7RTW8 1153 aa16.61■□□□□ 0.25
NELFCD-201ENST00000460601 TBC1D3Q8IZP1 549 aaPredicted RBP16.61■□□□□ 0.25
NELFCD-201ENST00000460601 RASGEF1AQ8N9B8 481 aa16.61■□□□□ 0.25
NELFCD-201ENST00000460601 ZNF473Q8WTR7 871 aaKnown RBP16.61■□□□□ 0.25
NELFCD-201ENST00000460601 DCUN1D1Q96GG9 259 aa16.61■□□□□ 0.25
NELFCD-201ENST00000460601 MRPL57Q9BQC6 102 aaKnown RBP16.61■□□□□ 0.25
NELFCD-201ENST00000460601 LGR4Q9BXB1 951 aa16.61■□□□□ 0.25
NELFCD-201ENST00000460601 CYP4F12Q9HCS2 524 aa16.61■□□□□ 0.25
NELFCD-201ENST00000460601 RAD18Q9NS91 495 aa16.61■□□□□ 0.25
NELFCD-201ENST00000460601 EBF1Q9UH73 591 aa16.61■□□□□ 0.25
NELFCD-201ENST00000460601 DHRS7Q9Y394 339 aa16.61■□□□□ 0.25
NELFCD-201ENST00000460601 COMMD10Q9Y6G5 202 aa16.61■□□□□ 0.25
NELFCD-201ENST00000460601 A0A1W2PQU0 124 aa16.6■□□□□ 0.25
NELFCD-201ENST00000460601 BTN3A1O00481 513 aa16.6■□□□□ 0.25
NELFCD-201ENST00000460601 BIRC5O15392 142 aa16.6■□□□□ 0.25
NELFCD-201ENST00000460601 ITM2AO43736 263 aa16.6■□□□□ 0.25
NELFCD-201ENST00000460601 MYL2P10916 166 aa16.6■□□□□ 0.25
NELFCD-201ENST00000460601 CCR10P46092 362 aa16.6■□□□□ 0.25
NELFCD-201ENST00000460601 DPTQ07507 201 aa16.6■□□□□ 0.25
NELFCD-201ENST00000460601 TMEM115Q12893 351 aaPredicted RBP16.6■□□□□ 0.25
NELFCD-201ENST00000460601 ACSBG2Q5FVE4 666 aa16.6■□□□□ 0.25
NELFCD-201ENST00000460601 FBXO48Q5FWF7 155 aa16.6■□□□□ 0.25
NELFCD-201ENST00000460601 ANO7Q6IWH7 933 aa16.6■□□□□ 0.25
NELFCD-201ENST00000460601 KLC3Q6P597 504 aa16.6■□□□□ 0.25
NELFCD-201ENST00000460601 ZYG11AQ6WRX3 759 aa16.6■□□□□ 0.25
NELFCD-201ENST00000460601 RPS27LQ71UM5 84 aaKnown RBP16.6■□□□□ 0.25
NELFCD-201ENST00000460601 LCA5Q86VQ0 697 aa16.6■□□□□ 0.25
NELFCD-201ENST00000460601 DTX3LQ8TDB6 740 aa16.6■□□□□ 0.25
NELFCD-201ENST00000460601 PITPNM3Q9BZ71 974 aa16.6■□□□□ 0.25
NELFCD-201ENST00000460601 FBRSQ9HAH7 460 aa16.6■□□□□ 0.25
NELFCD-201ENST00000460601 SYTL2Q9HCH5 934 aa16.6■□□□□ 0.25
NELFCD-201ENST00000460601 LTB4R2Q9NPC1 389 aa16.6■□□□□ 0.25
NELFCD-201ENST00000460601 THEGQ9P2T0 379 aa16.6■□□□□ 0.25
NELFCD-201ENST00000460601 OR1A2Q9Y585 309 aa16.6■□□□□ 0.25
NELFCD-201ENST00000460601 PCYT1BQ9Y5K3 369 aaPredicted RBP16.6■□□□□ 0.25
NELFCD-201ENST00000460601 FAM170BA6NMN3 283 aa16.6■□□□□ 0.25
NELFCD-201ENST00000460601 RAD51BO15315 384 aa16.6■□□□□ 0.25
NELFCD-201ENST00000460601 SLC26A3P40879 764 aa16.6■□□□□ 0.25
NELFCD-201ENST00000460601 SKIV2L2P42285 1042 aaKnown RBP16.6■□□□□ 0.25
NELFCD-201ENST00000460601 IL2P60568 153 aa16.6■□□□□ 0.25
NELFCD-201ENST00000460601 PHYKPLQ8IUZ5 450 aa16.6■□□□□ 0.25
NELFCD-201ENST00000460601 PHF21BQ96EK2 531 aa16.6■□□□□ 0.25
NELFCD-201ENST00000460601 HHIPQ96QV1 700 aa16.6■□□□□ 0.25
NELFCD-201ENST00000460601 ELAC2Q9BQ52 826 aaKnown RBP16.6■□□□□ 0.25
NELFCD-201ENST00000460601 DERL2Q9GZP9 239 aa16.6■□□□□ 0.25
NELFCD-201ENST00000460601 OR2AG1Q9H205 316 aa16.6■□□□□ 0.25
NELFCD-201ENST00000460601 CD320Q9NPF0 282 aa16.6■□□□□ 0.25
NELFCD-201ENST00000460601 OXSMQ9NWU1 459 aa16.6■□□□□ 0.25
NELFCD-201ENST00000460601 MUTYHQ9UIF7 546 aa16.6■□□□□ 0.25
NELFCD-201ENST00000460601 KANSL1LA0AUZ9 987 aa16.59■□□□□ 0.25
NELFCD-201ENST00000460601 EDF1O60869 148 aaKnown RBP16.59■□□□□ 0.25
NELFCD-201ENST00000460601 RNGTTO60942 597 aaKnown RBP16.59■□□□□ 0.25
NELFCD-201ENST00000460601 RALBP11234 206 aa16.59■□□□□ 0.25
NELFCD-201ENST00000460601 CD9P21926 228 aa16.59■□□□□ 0.25
NELFCD-201ENST00000460601 PRKCQQ04759 706 aa16.59■□□□□ 0.25
NELFCD-201ENST00000460601 HSPA14Q0VDF9 509 aa16.59■□□□□ 0.25
NELFCD-201ENST00000460601 BOP1Q14137 746 aaKnown RBP16.59■□□□□ 0.25
NELFCD-201ENST00000460601 INPP5AQ14642 412 aa16.59■□□□□ 0.25
NELFCD-201ENST00000460601 TMEM259Q4ZIN3 620 aa16.59■□□□□ 0.25
NELFCD-201ENST00000460601 PNCKQ6P2M8 343 aa16.59■□□□□ 0.25
NELFCD-201ENST00000460601 FOXR1Q6PIV2 292 aa16.59■□□□□ 0.25
NELFCD-201ENST00000460601 ZNF765Q7L2R6 523 aa16.59■□□□□ 0.25
NELFCD-201ENST00000460601 HEATR4Q86WZ0 1026 aa16.59■□□□□ 0.25
NELFCD-201ENST00000460601 VRK3Q8IV63 474 aa16.59■□□□□ 0.25
NELFCD-201ENST00000460601 PGBD3Q8N328 593 aa16.59■□□□□ 0.25
NELFCD-201ENST00000460601 ZBTB2Q8N680 514 aa16.59■□□□□ 0.25
NELFCD-201ENST00000460601 LILRA3Q8N6C8 439 aaPredicted RBP16.59■□□□□ 0.25
NELFCD-201ENST00000460601 FRMD1Q8N878 549 aa16.59■□□□□ 0.25
NELFCD-201ENST00000460601 PPP1R14CQ8TAE6 165 aa16.59■□□□□ 0.25
NELFCD-201ENST00000460601 SPATS2LQ9NUQ6 558 aaKnown RBP16.59■□□□□ 0.25
NELFCD-201ENST00000460601 WNT16Q9UBV4 365 aa16.59■□□□□ 0.25
NELFCD-201ENST00000460601 TMEM98Q9Y2Y6 226 aa16.59■□□□□ 0.25
NELFCD-201ENST00000460601 NCF1BA6NI72 391 aaPredicted RBP16.58■□□□□ 0.25
NELFCD-201ENST00000460601 NCF1CA8MVU1 366 aaPredicted RBP16.58■□□□□ 0.25
NELFCD-201ENST00000460601 UBXN8O00124 270 aa16.58■□□□□ 0.25
NELFCD-201ENST00000460601 OR56A5P0C7T3 313 aa16.58■□□□□ 0.25
NELFCD-201ENST00000460601 NCF1P14598 390 aaPredicted RBP16.58■□□□□ 0.25
NELFCD-201ENST00000460601 ILF2Q12905 390 aaKnown RBP16.58■□□□□ 0.25
NELFCD-201ENST00000460601 IRF4Q15306 451 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms