RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 INHBAP08476 426 aa10.23□□□□□ -0.77
USP39-210ENST00000459775 MYZAPP0CAP1 466 aa10.23□□□□□ -0.77
USP39-210ENST00000459775 C6P13671 934 aa10.23□□□□□ -0.77
USP39-210ENST00000459775 FOXN2P32314 431 aa10.23□□□□□ -0.77
USP39-210ENST00000459775 HALP42357 657 aa10.23□□□□□ -0.77
USP39-210ENST00000459775 TPMTP51580 245 aa10.23□□□□□ -0.77
USP39-210ENST00000459775 PLIN5Q00G26 463 aa10.23□□□□□ -0.77
USP39-210ENST00000459775 LAMB3Q13751 1172 aa10.23□□□□□ -0.77
USP39-210ENST00000459775 FGL2Q14314 439 aa10.23□□□□□ -0.77
USP39-210ENST00000459775 KLHL38Q2WGJ6 581 aa10.23□□□□□ -0.77
USP39-210ENST00000459775 ATP13A5Q4VNC0 1218 aa10.23□□□□□ -0.77
USP39-210ENST00000459775 RBM20Q5T481 1227 aaKnown RBP10.23□□□□□ -0.77
USP39-210ENST00000459775 MZT2AQ6P582 158 aa10.23□□□□□ -0.77
USP39-210ENST00000459775 TRMT11Q7Z4G4 463 aaKnown RBP10.23□□□□□ -0.77
USP39-210ENST00000459775 PJA1Q8NG27 643 aa10.23□□□□□ -0.77
USP39-210ENST00000459775 B4GALNT2Q8NHY0 566 aa10.23□□□□□ -0.77
USP39-210ENST00000459775 MSANTD3Q96H12 275 aa10.23□□□□□ -0.77
USP39-210ENST00000459775 MYOCQ99972 504 aa10.23□□□□□ -0.77
USP39-210ENST00000459775 CCDC77Q9BR77 488 aa10.23□□□□□ -0.77
USP39-210ENST00000459775 RIOK2Q9BVS4 552 aaKnown RBP10.23□□□□□ -0.77
USP39-210ENST00000459775 BOCQ9BWV1 1114 aa10.23□□□□□ -0.77
USP39-210ENST00000459775 HDAC8Q9BY41 377 aa10.23□□□□□ -0.77
USP39-210ENST00000459775 C12orf65Q9H3J6 166 aaKnown RBP10.23□□□□□ -0.77
USP39-210ENST00000459775 TRABDQ9H4I3 376 aa10.23□□□□□ -0.77
USP39-210ENST00000459775 FBXO5Q9UKT4 447 aa10.23□□□□□ -0.77
USP39-210ENST00000459775 ZFR2Q9UPR6 939 aaKnown RBP10.23□□□□□ -0.77
USP39-210ENST00000459775 DNAH14Q0VDD8 3507 aa10.23□□□□□ -0.77
USP39-210ENST00000459775 CKAP5Q14008 2032 aa10.23□□□□□ -0.77
USP39-210ENST00000459775 MED19A0JLT2 244 aaPredicted RBP10.22□□□□□ -0.77
USP39-210ENST00000459775 FADS2P1A8MWK0 482 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 SLC7A4O43246 635 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 SRP72O76094 671 aaKnown RBP10.22□□□□□ -0.77
USP39-210ENST00000459775 RECQL5O94762 991 aaPredicted RBP10.22□□□□□ -0.77
USP39-210ENST00000459775 S1PR4O95977 384 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 ADH1BP00325 375 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 GSTA2P09210 222 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 PAMP19021 973 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 LIMK1P53667 647 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 BNIP1Q12981 228 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 ZNF460Q14592 562 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 ADGRD1Q6QNK2 874 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 MARK2Q7KZI7 788 aaKnown RBP10.22□□□□□ -0.77
USP39-210ENST00000459775 NLRP9Q7RTR0 991 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 TECPR1Q7Z6L1 1165 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 CMC1Q7Z7K0 106 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 SLC26A11Q86WA9 606 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 CILP2Q8IUL8 1156 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 C4orf33Q8N1A6 199 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 CBARPQ8N350 705 aaPredicted RBP10.22□□□□□ -0.77
USP39-210ENST00000459775 DEFB119Q8N690 84 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 PLA2G15Q8NCC3 412 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 SHDQ96IW2 340 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 SERAC1Q96JX3 654 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 ASB8Q9H765 288 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 FZD3Q9NPG1 666 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 CATSPERZQ9NTU4 200 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 DLL3Q9NYJ7 618 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 MRPS17Q9Y2R5 130 aaKnown RBP10.22□□□□□ -0.77
USP39-210ENST00000459775 SIT1Q9Y3P8 196 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 GLYATL1P3A0A0U1RQE8 302 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 TRIM49D1C9J1S8 452 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 INPP4BO15327 924 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 RGS16O15492 202 aaPredicted RBP10.22□□□□□ -0.77
USP39-210ENST00000459775 TMCC2O75069 709 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 AGR2O95994 175 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 PAK4O96013 591 aaPredicted RBP10.22□□□□□ -0.77
USP39-210ENST00000459775 CYP2A6P11509 494 aaPredicted RBP10.22□□□□□ -0.77
USP39-210ENST00000459775 ADPRHP54922 357 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 EIF3BP55884 814 aaKnown RBP10.22□□□□□ -0.77
USP39-210ENST00000459775 MAGOHP61326 146 aaKnown RBP10.22□□□□□ -0.77
USP39-210ENST00000459775 PPP2CBP62714 309 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 PPP2CAP67775 309 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 KHDC1Q4VXA5 237 aaKnown RBP10.22□□□□□ -0.77
USP39-210ENST00000459775 PPM1JQ5JR12 505 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 ZNF549Q6P9A3 640 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 TSSK4Q6SA08 328 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 CYS1Q717R9 158 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 SYT13Q7L8C5 426 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 CLDN19Q8N6F1 224 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 C2CD4AQ8NCU7 369 aaPredicted RBP10.22□□□□□ -0.77
USP39-210ENST00000459775 HCAR2Q8TDS4 363 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 MZB1Q8WU39 189 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 COQ10AQ96MF6 247 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 TMEM109Q9BVC6 243 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 UNKQ9C0B0 810 aaKnown RBP10.22□□□□□ -0.77
USP39-210ENST00000459775 CAAP1Q9H8G2 361 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 PSMC3IPQ9P2W1 217 aaPredicted RBP10.22□□□□□ -0.77
USP39-210ENST00000459775 GALPQ9UBC7 116 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 CDV3Q9UKY7 258 aaKnown RBP10.22□□□□□ -0.77
USP39-210ENST00000459775 CA5BQ9Y2D0 317 aa10.22□□□□□ -0.77
USP39-210ENST00000459775 TBC1D3DA0A087WVF3 549 aa10.21□□□□□ -0.77
USP39-210ENST00000459775 TBC1D3IA0A087WXS9 549 aa10.21□□□□□ -0.77
USP39-210ENST00000459775 TBC1D3EA0A087X179 549 aa10.21□□□□□ -0.77
USP39-210ENST00000459775 TBC1D3KA0A087X1G2 549 aa10.21□□□□□ -0.77
USP39-210ENST00000459775 A0A1W2PQ67 120 aa10.21□□□□□ -0.77
USP39-210ENST00000459775 UBA6A0AVT1 1052 aaPredicted RBP10.21□□□□□ -0.77
USP39-210ENST00000459775 TBC1D3FA6NER0 549 aaPredicted RBP10.21□□□□□ -0.77
USP39-210ENST00000459775 IQCF5A8MTL0 148 aa10.21□□□□□ -0.77
USP39-210ENST00000459775 TBC1D3LB9A6J9 549 aa10.21□□□□□ -0.77
USP39-210ENST00000459775 LZTS3O60299 673 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms