RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 PCSK7Q16549 785 aa21.15■□□□□ 0.98
CPNE1-220ENST00000458038 PLA2G4EQ3MJ16 856 aa21.15■□□□□ 0.98
CPNE1-220ENST00000458038 CACHD1Q5VU97 1274 aa21.15■□□□□ 0.98
CPNE1-220ENST00000458038 TCTN3Q6NUS6 607 aa21.15■□□□□ 0.98
CPNE1-220ENST00000458038 KLHL35Q6PF15 583 aa21.15■□□□□ 0.98
CPNE1-220ENST00000458038 PPP1R3BQ86XI6 285 aa21.15■□□□□ 0.98
CPNE1-220ENST00000458038 GALNT6Q8NCL4 622 aa21.15■□□□□ 0.98
CPNE1-220ENST00000458038 SEC14L1Q92503 715 aa21.15■□□□□ 0.98
CPNE1-220ENST00000458038 ZCCHC2Q9C0B9 1178 aaKnown RBP21.15■□□□□ 0.98
CPNE1-220ENST00000458038 DEF6Q9H4E7 631 aa21.15■□□□□ 0.98
CPNE1-220ENST00000458038 GLOD4Q9HC38 313 aa21.15■□□□□ 0.98
CPNE1-220ENST00000458038 ANKMY1Q9P2S6 941 aa21.15■□□□□ 0.98
CPNE1-220ENST00000458038 A0A0A6YYK5 440 aaPredicted RBP21.14■□□□□ 0.97
CPNE1-220ENST00000458038 SSU72P8A0A1W2PR75 194 aa21.14■□□□□ 0.97
CPNE1-220ENST00000458038 KIAA0754O94854 1291 aa21.14■□□□□ 0.97
CPNE1-220ENST00000458038 NELFEP18615 380 aaKnown RBP21.14■□□□□ 0.97
CPNE1-220ENST00000458038 F8A1P23610 371 aa21.14■□□□□ 0.97
CPNE1-220ENST00000458038 RPL10P27635 214 aaKnown RBP21.14■□□□□ 0.97
CPNE1-220ENST00000458038 TNNT3P45378 269 aaPredicted RBP21.14■□□□□ 0.97
CPNE1-220ENST00000458038 NR2C2P49116 596 aa21.14■□□□□ 0.97
CPNE1-220ENST00000458038 GPR18Q14330 331 aa21.14■□□□□ 0.97
CPNE1-220ENST00000458038 SEPT7Q16181 437 aaKnown RBP21.14■□□□□ 0.97
CPNE1-220ENST00000458038 TRAPPC5Q8IUR0 188 aa21.14■□□□□ 0.97
CPNE1-220ENST00000458038 OR8K1Q8NGG5 319 aa21.14■□□□□ 0.97
CPNE1-220ENST00000458038 SLC35G2Q8TBE7 412 aa21.14■□□□□ 0.97
CPNE1-220ENST00000458038 UBXN4Q92575 508 aa21.14■□□□□ 0.97
CPNE1-220ENST00000458038 PACSIN1Q9BY11 444 aa21.14■□□□□ 0.97
CPNE1-220ENST00000458038 PDE7BQ9NP56 450 aa21.14■□□□□ 0.97
CPNE1-220ENST00000458038 DDX56Q9NY93 547 aaKnown RBP21.14■□□□□ 0.97
CPNE1-220ENST00000458038 IFNKQ9P0W0 207 aa21.14■□□□□ 0.97
CPNE1-220ENST00000458038 SEMA5BQ9P283 1151 aa21.14■□□□□ 0.97
CPNE1-220ENST00000458038 MRPS18BQ9Y676 258 aaKnown RBP21.14■□□□□ 0.97
CPNE1-220ENST00000458038 DNMT3AQ9Y6K1 912 aaPredicted RBP21.14■□□□□ 0.97
CPNE1-220ENST00000458038 SPTBN1Q01082 2364 aaKnown RBP21.13■□□□□ 0.97
CPNE1-220ENST00000458038 C21orf140B9A014 251 aa21.13■□□□□ 0.97
CPNE1-220ENST00000458038 SPAG6O75602 509 aa21.13■□□□□ 0.97
CPNE1-220ENST00000458038 EPOP01588 193 aa21.13■□□□□ 0.97
CPNE1-220ENST00000458038 SLC4A1P02730 911 aa21.13■□□□□ 0.97
CPNE1-220ENST00000458038 ZNF28P17035 718 aa21.13■□□□□ 0.97
CPNE1-220ENST00000458038 LEPRP48357 1165 aaKnown RBP21.13■□□□□ 0.97
CPNE1-220ENST00000458038 SH3BP2P78314 561 aa21.13■□□□□ 0.97
CPNE1-220ENST00000458038 DMPKQ09013 629 aa21.13■□□□□ 0.97
CPNE1-220ENST00000458038 ASTE1Q2TB18 679 aaPredicted RBP21.13■□□□□ 0.97
CPNE1-220ENST00000458038 ATP13A5Q4VNC0 1218 aa21.13■□□□□ 0.97
CPNE1-220ENST00000458038 C11orf96Q7Z7L8 435 aa21.13■□□□□ 0.97
CPNE1-220ENST00000458038 RHOT2Q8IXI1 618 aa21.13■□□□□ 0.97
CPNE1-220ENST00000458038 SPATA22Q8NHS9 363 aa21.13■□□□□ 0.97
CPNE1-220ENST00000458038 GDAP1Q8TB36 358 aa21.13■□□□□ 0.97
CPNE1-220ENST00000458038 TEKT5Q96M29 485 aa21.13■□□□□ 0.97
CPNE1-220ENST00000458038 CEP41Q9BYV8 373 aa21.13■□□□□ 0.97
CPNE1-220ENST00000458038 ZNHIT6Q9NWK9 470 aaKnown RBP21.13■□□□□ 0.97
CPNE1-220ENST00000458038 HACD3Q9P035 362 aa21.13■□□□□ 0.97
CPNE1-220ENST00000458038 FAM153AQ9UHL3 310 aa21.13■□□□□ 0.97
CPNE1-220ENST00000458038 LNPEPQ9UIQ6 1025 aa21.13■□□□□ 0.97
CPNE1-220ENST00000458038 PRRC2CQ9Y520 2896 aaKnown RBP21.13■□□□□ 0.97
CPNE1-220ENST00000458038 USP9XQ93008 2570 aaPredicted RBP21.12■□□□□ 0.97
CPNE1-220ENST00000458038 SPTAN1Q13813 2472 aaKnown RBP21.12■□□□□ 0.97
CPNE1-220ENST00000458038 CLEC18AA5D8T8 446 aa21.12■□□□□ 0.97
CPNE1-220ENST00000458038 OR52A4PA6NMU1 304 aa21.12■□□□□ 0.97
CPNE1-220ENST00000458038 MTSS1O43312 755 aa21.12■□□□□ 0.97
CPNE1-220ENST00000458038 AKR1B10O60218 316 aa21.12■□□□□ 0.97
CPNE1-220ENST00000458038 MTX2O75431 263 aa21.12■□□□□ 0.97
CPNE1-220ENST00000458038 PMPCBO75439 489 aa21.12■□□□□ 0.97
CPNE1-220ENST00000458038 KATNA1O75449 491 aa21.12■□□□□ 0.97
CPNE1-220ENST00000458038 CREG1O75629 220 aa21.12■□□□□ 0.97
CPNE1-220ENST00000458038 MT-CYBP00156 380 aaPredicted RBP21.12■□□□□ 0.97
CPNE1-220ENST00000458038 NTRK1P04629 796 aa21.12■□□□□ 0.97
CPNE1-220ENST00000458038 SLC1A1P43005 524 aa21.12■□□□□ 0.97
CPNE1-220ENST00000458038 TRIM14Q14142 442 aa21.12■□□□□ 0.97
CPNE1-220ENST00000458038 ERV3-1Q14264 604 aa21.12■□□□□ 0.97
CPNE1-220ENST00000458038 IGFBP7Q16270 282 aa21.12■□□□□ 0.97
CPNE1-220ENST00000458038 KHDC1Q4VXA5 237 aaKnown RBP21.12■□□□□ 0.97
CPNE1-220ENST00000458038 LDLRAP1Q5SW96 308 aa21.12■□□□□ 0.97
CPNE1-220ENST00000458038 ATP1A1-AS1Q5TC04 95 aa21.12■□□□□ 0.97
CPNE1-220ENST00000458038 IRGCQ6NXR0 463 aa21.12■□□□□ 0.97
CPNE1-220ENST00000458038 CLEC18BQ6UXF7 455 aa21.12■□□□□ 0.97
CPNE1-220ENST00000458038 AMZ2Q86W34 360 aa21.12■□□□□ 0.97
CPNE1-220ENST00000458038 KMT5CQ86Y97 462 aa21.12■□□□□ 0.97
CPNE1-220ENST00000458038 RFX6Q8HWS3 928 aa21.12■□□□□ 0.97
CPNE1-220ENST00000458038 TEX19Q8NA77 164 aa21.12■□□□□ 0.97
CPNE1-220ENST00000458038 CLEC18CQ8NCF0 446 aa21.12■□□□□ 0.97
CPNE1-220ENST00000458038 RSC1A1Q92681 617 aa21.12■□□□□ 0.97
CPNE1-220ENST00000458038 DNAJC7Q99615 494 aa21.12■□□□□ 0.97
CPNE1-220ENST00000458038 TMPRSS11EQ9UL52 423 aa21.12■□□□□ 0.97
CPNE1-220ENST00000458038 SYCE3A1L190 88 aa21.11■□□□□ 0.97
CPNE1-220ENST00000458038 KIF1CO43896 1103 aaKnown RBP21.11■□□□□ 0.97
CPNE1-220ENST00000458038 RFPL1O75677 317 aa21.11■□□□□ 0.97
CPNE1-220ENST00000458038 FECHP22830 423 aa21.11■□□□□ 0.97
CPNE1-220ENST00000458038 DRG2P55039 364 aaKnown RBP21.11■□□□□ 0.97
CPNE1-220ENST00000458038 TFDP2Q14188 446 aa21.11■□□□□ 0.97
CPNE1-220ENST00000458038 RHOT1Q8IXI2 618 aa21.11■□□□□ 0.97
CPNE1-220ENST00000458038 SIDT2Q8NBJ9 832 aaKnown RBP21.11■□□□□ 0.97
CPNE1-220ENST00000458038 SLC41A2Q96JW4 573 aa21.11■□□□□ 0.97
CPNE1-220ENST00000458038 GPR87Q9BY21 358 aa21.11■□□□□ 0.97
CPNE1-220ENST00000458038 RARRES3Q9UL19 164 aa21.11■□□□□ 0.97
CPNE1-220ENST00000458038 TP53TG5Q9Y2B4 290 aa21.11■□□□□ 0.97
CPNE1-220ENST00000458038 SPO11Q9Y5K1 396 aa21.11■□□□□ 0.97
CPNE1-220ENST00000458038 LOC285095A0A1B0GVY8 99 aa21.1■□□□□ 0.97
CPNE1-220ENST00000458038 PIPSLA2A3N6 862 aa21.1■□□□□ 0.97
CPNE1-220ENST00000458038 KLHL33A6NCF5 533 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms