RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 WHRNQ9P202 907 aa9.92□□□□□ -0.82
ATG4A-206ENST00000457035 SLC23A2Q9UGH3 650 aa9.92□□□□□ -0.82
ATG4A-206ENST00000457035 CRLS1Q9UJA2 301 aa9.92□□□□□ -0.82
ATG4A-206ENST00000457035 ANAPC5Q9UJX4 755 aa9.92□□□□□ -0.82
ATG4A-206ENST00000457035 GPR34Q9UPC5 381 aa9.92□□□□□ -0.82
ATG4A-206ENST00000457035 U3KQA8 63 aa9.92□□□□□ -0.82
ATG4A-206ENST00000457035 KIF26BQ2KJY2 2108 aa9.92□□□□□ -0.82
ATG4A-206ENST00000457035 EPG5Q9HCE0 2579 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 ZCWPW2A0A1B0GU75 182 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 CTAGE15A4D2H0 777 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 PRR19A6NJB7 356 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 KMOO15229 486 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 TNFSF14O43557 240 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 LDOC1O95751 146 aaPredicted RBP9.91□□□□□ -0.82
ATG4A-206ENST00000457035 CTAGE8P0CG41 777 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 ACRV1P26436 265 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 CLCNKAP51800 687 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 PRAMEP78395 509 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 SLC7A5Q01650 507 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 DHX9Q08211 1270 aaKnown RBP9.91□□□□□ -0.82
ATG4A-206ENST00000457035 ILF3Q12906 894 aaKnown RBP eCLIP9.91□□□□□ -0.82
ATG4A-206ENST00000457035 FOXC1Q12948 553 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 LRP8Q14114 963 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 DBN1Q16643 649 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 INAVAQ3KP66 663 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 ANKRD20A4Q4UJ75 823 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 CHST15Q7LFX5 561 aaPredicted RBP9.91□□□□□ -0.82
ATG4A-206ENST00000457035 TAS2R42Q7RTR8 314 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 CTAGE6Q86UF2 777 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 LRRTM4Q86VH4 590 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 IGDCC3Q8IVU1 814 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 SFTPA2Q8IWL1 248 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 CTAGE4Q8IX94 777 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 NOA1Q8NC60 698 aaKnown RBP9.91□□□□□ -0.82
ATG4A-206ENST00000457035 BBOF1Q8ND07 529 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 MNS1Q8NEH6 495 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 NAT14Q8WUY8 206 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 HEXDCQ8WVB3 486 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 SCG3Q8WXD2 468 aaKnown RBP9.91□□□□□ -0.82
ATG4A-206ENST00000457035 SEC14L1Q92503 715 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 SGF29Q96ES7 293 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 CNDP2Q96KP4 475 aaKnown RBP9.91□□□□□ -0.82
ATG4A-206ENST00000457035 APOLD1Q96LR9 279 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 TTC25Q96NG3 672 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 COPS8Q99627 209 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 GSDMCQ9BYG8 508 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 DPH5Q9H2P9 285 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 TOR4AQ9NXH8 423 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 TAAR2Q9P1P5 351 aa9.91□□□□□ -0.82
ATG4A-206ENST00000457035 UTP11Q9Y3A2 253 aaKnown RBP9.91□□□□□ -0.82
ATG4A-206ENST00000457035 DNMT3AQ9Y6K1 912 aaPredicted RBP9.91□□□□□ -0.82
ATG4A-206ENST00000457035 CHD8Q9HCK8 2581 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 SPAARA0A1B0GVQ0 90 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 OR2AG2A6NM03 316 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 E7ESA3 106 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 CD3EAPO15446 510 aaKnown RBP9.9□□□□□ -0.82
ATG4A-206ENST00000457035 NOBOXO60393 691 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 BANF1O75531 89 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 POP7O75817 140 aaKnown RBP9.9□□□□□ -0.82
ATG4A-206ENST00000457035 USP1O94782 785 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 VAPBO95292 243 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 ALPPL2P10696 532 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 CKMT1AP12532 417 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 MYF5P13349 255 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 ATP1B2P14415 290 aaPredicted RBP9.9□□□□□ -0.82
ATG4A-206ENST00000457035 ZNF7P17097 686 aaPredicted RBP9.9□□□□□ -0.82
ATG4A-206ENST00000457035 CKMT2P17540 419 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 SPINK2P20155 84 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 MSH3P20585 1137 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 ACTR1BP42025 376 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 ACTR1AP61163 376 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 SEMA3AQ14563 771 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 ITIH4Q14624 930 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 FASTKD1Q53R41 847 aaKnown RBP9.9□□□□□ -0.82
ATG4A-206ENST00000457035 KIAA0930Q6ICG6 404 aaPredicted RBP9.9□□□□□ -0.82
ATG4A-206ENST00000457035 ZCCHC8Q6NZY4 707 aaKnown RBP9.9□□□□□ -0.82
ATG4A-206ENST00000457035 CASC4Q6P4E1 433 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 SLC30A9Q6PML9 568 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 AFTPHQ6ULP2 937 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 CRTC3Q6UUV7 619 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 CERS6Q6ZMG9 384 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 SLCO6A1Q86UG4 719 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 C17orf82Q86X59 251 aaPredicted RBP9.9□□□□□ -0.82
ATG4A-206ENST00000457035 SLC35F3Q8IY50 421 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 PDIK1LQ8N165 341 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 CEP112Q8N8E3 955 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 FAM46DQ8NEK8 389 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 GPR156Q8NFN8 814 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 ART4Q93070 314 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 STAMBPL1Q96FJ0 436 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 ZNF514Q96K75 400 aaPredicted RBP9.9□□□□□ -0.82
ATG4A-206ENST00000457035 LINC00615Q96LM1 132 aaPredicted RBP9.9□□□□□ -0.82
ATG4A-206ENST00000457035 EBNA1BP2Q99848 306 aaKnown RBP9.9□□□□□ -0.82
ATG4A-206ENST00000457035 WDR83Q9BRX9 315 aaKnown RBP9.9□□□□□ -0.82
ATG4A-206ENST00000457035 ZCCHC2Q9C0B9 1178 aaKnown RBP9.9□□□□□ -0.82
ATG4A-206ENST00000457035 RAB17Q9H0T7 212 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 L2HGDHQ9H9P8 463 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 PLAC1Q9HBJ0 212 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 KLC4Q9NSK0 619 aa9.9□□□□□ -0.82
ATG4A-206ENST00000457035 SAMD15Q9P1V8 674 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms