RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 ZACNQ401N2 412 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 TXNDC11Q6PKC3 985 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 ZNF615Q8N8J6 731 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 WDR48Q8TAF3 677 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 LRRC58Q96CX6 371 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 TUBA1CQ9BQE3 449 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 SMOXQ9NWM0 555 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 OR12D3Q9UGF7 316 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 ZDHHC2Q9UIJ5 367 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 TRAV6A0A075B6T7 132 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 STMND1H3BQB6 276 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 CBX4O00257 560 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 OTCP00480 354 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 SLC6A2P23975 617 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 ZNF234Q14588 700 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 USP45Q70EL2 814 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 STK40Q8N2I9 435 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 HEXDCQ8WVB3 486 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 SLC25A13Q9UJS0 675 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 ANGPT4Q9Y264 503 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 GRIP1Q9Y3R0 1128 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 ISM1B1AKI9 464 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 INMT-MINDY4F8WBC2 141 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 SUPT20HL2P0C7V6 817 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 YWHAQP27348 245 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 SLC6A4P31645 630 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 MAGEA12P43365 314 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 ALDH7A1P49419 539 aaKnown RBP12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 IRF8Q02556 426 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 SUPT20HL1Q3ZLR7 823 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 PPP1R26Q5T8A7 1209 aaPredicted RBP12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 LDB1Q86U70 411 aaPredicted RBP12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 NLGN1Q8N2Q7 840 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 GALNT11Q8NCW6 608 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 LGALS12Q96DT0 336 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 FCRL4Q96PJ5 515 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 MKRN2Q9H000 416 aaKnown RBP12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.23□□□□□ -0.452e-6■■■■□ 21.6
NEDD4L-208ENST00000456173 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 SLC15A5A6NIM6 579 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 SLC28A1O00337 649 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 ICMTO60725 284 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 CYP2C18P33260 490 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 GSK3BP49841 420 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 TSPAN5P62079 268 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 EFEMP1Q12805 493 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 ZNF177Q13360 481 aaPredicted RBP12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 CEACAM7Q14002 265 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 DRICH1Q6PGQ1 229 aaPredicted RBP12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 COMMD7Q86VX2 200 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 SLC15A3Q8IY34 581 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 GPR156Q8NFN8 814 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 POP5Q969H6 163 aaKnown RBP12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 HAPLN3Q96S86 360 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 FNDC11Q9BVV2 318 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 ANKHQ9HCJ1 492 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 ZBTB26Q9HCK0 441 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 INTS7Q9NVH2 962 aaKnown RBP12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 ACTR3BQ9P1U1 418 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 RPS6KB2Q9UBS0 482 aa12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 FARP1Q9Y4F1 1045 aaPredicted RBP12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 SPIN1Q9Y657 262 aaPredicted RBP12.23□□□□□ -0.45
NEDD4L-208ENST00000456173 B3GALNT1O75752 331 aa12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 ERBB2P04626 1255 aa12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 PPP5CP53041 499 aa12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 LAPTM4AQ15012 233 aa12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 KHDRBS2Q5VWX1 349 aaKnown RBP12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 SLITRK4Q8IW52 837 aa12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 CFAP206Q8IYR0 622 aa12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 TMEM161BQ8NDZ6 487 aa12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 SNAPC3Q92966 411 aa12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 KCNC2Q96PR1 638 aa12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 CPNE5Q9HCH3 593 aa12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 SLC39A1Q9NY26 324 aa12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 SNX6Q9UNH7 406 aa12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 CDRT1O95170 752 aa12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 TYMPP19971 482 aa12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 NFIAQ12857 509 aa12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 GK3PQ14409 553 aa12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 HECTD2Q5U5R9 776 aa12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 DESI1Q6ICB0 168 aa12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 RAB12Q6IQ22 244 aa12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 PIAS4Q8N2W9 510 aaPredicted RBP12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 LRRC3Q9BY71 257 aa12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 DSN1Q9H410 356 aa12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 FAM83DQ9H4H8 585 aa12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 HCN3Q9P1Z3 774 aa12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 N6AMT1Q9Y5N5 214 aa12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 COL3A1P02461 1466 aaPredicted RBP12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 SOCS2O14508 198 aa12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 STX16O14662 325 aa12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 CYBBP04839 570 aa12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 NFICP08651 508 aa12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 PTPN1P18031 435 aaKnown RBP12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 ENDOUP21128 410 aaKnown RBP12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 GALNT7Q86SF2 657 aa12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 TXNRD3Q86VQ6 643 aa12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 OXR1Q8N573 874 aa12.22□□□□□ -0.45
NEDD4L-208ENST00000456173 OR10Q1Q8NGQ4 319 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms