RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 CBWD2Q8IUF1 395 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 CMTR2Q8IYT2 770 aaKnown RBP5.17□□□□□ -1.58
CSMD3-204ENST00000455883 REPS2Q8NFH8 660 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 ERVW-1Q9UQF0 538 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 TRPV2Q9Y5S1 764 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 TMEM14AQ9Y6G1 99 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 WASF2Q9Y6W5 498 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 SLC16A4O15374 487 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 GADD45AP24522 165 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 CTSKP43235 329 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 MAP2K4P45985 399 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 TGM4P49221 684 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 MLLT6P55198 1093 aaPredicted RBP5.17□□□□□ -1.58
CSMD3-204ENST00000455883 VSX2P58304 361 aaPredicted RBP5.17□□□□□ -1.58
CSMD3-204ENST00000455883 PPARDQ03181 441 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 EXOC3L2Q2M3D2 409 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 USP41Q3LFD5 358 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 TMEM169Q96HH4 297 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 DIRAS2Q96HU8 199 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 TRIB3Q96RU7 358 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 SPON2Q9BUD6 331 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 USP29Q9HBJ7 922 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 SMURF1Q9HCE7 757 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 PRELID3BQ9Y3B1 194 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 SPEF1Q9Y4P9 236 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 PCDHGA2Q9Y5H1 932 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 ITGB4P16144 1822 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 ACKR2O00590 384 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 SASH3O75995 380 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 CST1P01037 141 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 IGFBP5P24593 272 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 MYBPC1Q00872 1141 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 KCNC3Q14003 757 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 IQCCQ4KMZ1 466 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 GTF2IRD2BQ6EKJ0 949 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 ADGRD1Q6QNK2 874 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 GTF2IRD2Q86UP8 949 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 DNAJC10Q8IXB1 793 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 POMGNT2Q8NAT1 580 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 SMG8Q8ND04 991 aaKnown RBP5.17□□□□□ -1.58
CSMD3-204ENST00000455883 FNDC8Q8TC99 324 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 FIG4Q92562 907 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 SGCDQ92629 289 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 ZBED6CLQ96FA7 236 aaPredicted RBP5.17□□□□□ -1.58
CSMD3-204ENST00000455883 WRNIP1Q96S55 665 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 FNDC11Q9BVV2 318 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 FARSBQ9NSD9 589 aaKnown RBP5.17□□□□□ -1.58
CSMD3-204ENST00000455883 ZNHIT2Q9UHR6 403 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 LRRC37A3O60309 1634 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 ELOVL7A1L3X0 281 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 HRH2P25021 359 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 HTR1BP28222 390 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 ELK3P41970 407 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 MTAPQ13126 283 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 TCEAL6Q6IPX3 200 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 METAP1DQ6UB28 335 aaPredicted RBP5.17□□□□□ -1.58
CSMD3-204ENST00000455883 ZNF517Q6ZMY9 492 aaPredicted RBP5.17□□□□□ -1.58
CSMD3-204ENST00000455883 SKA3Q8IX90 412 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 TERB2Q8NHR7 220 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 AGAP11Q8TF27 550 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 ISOC1Q96CN7 298 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 REXO5Q96IC2 774 aaKnown RBP5.17□□□□□ -1.58
CSMD3-204ENST00000455883 MAPKAP1Q9BPZ7 522 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 SPIN1Q9Y657 262 aaPredicted RBP5.17□□□□□ -1.58
CSMD3-204ENST00000455883 SORL1Q92673 2214 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 MYMKA6NI61 221 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 C8GP07360 202 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 HSD3B1P14060 373 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 HSD3B2P26439 372 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 CEBPGP53567 150 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 EEFSECP57772 596 aaKnown RBP5.17□□□□□ -1.58
CSMD3-204ENST00000455883 FADDQ13158 208 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 DEF8Q6ZN54 512 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 RALGPS2Q86X27 583 aaPredicted RBP5.17□□□□□ -1.58
CSMD3-204ENST00000455883 NCSTNQ92542 709 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 SLC22A18Q96BI1 424 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 MTMR9Q96QG7 549 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 RNPEPQ9H4A4 650 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 ABCB10Q9NRK6 738 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 DPP3Q9NY33 737 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 GYS2P54840 703 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 YBEYP58557 167 aaPredicted RBP5.17□□□□□ -1.58
CSMD3-204ENST00000455883 FMR1Q06787 632 aaKnown RBP eCLIP5.17□□□□□ -1.58
CSMD3-204ENST00000455883 USP4Q13107 963 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 IL18Q14116 193 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 IFNL1Q8IU54 200 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 ZNF321PQ8N8H1 164 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 SLC44A1Q8WWI5 657 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 THAP2Q9H0W7 228 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 CISHQ9NSE2 258 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 PHYHO14832 338 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 EPOP01588 193 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 SPARCP09486 303 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 ITGA4P13612 1032 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 HYIQ5T013 277 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 SLC35F1Q5T1Q4 408 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 OLFML2AQ68BL7 652 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 ULK3Q6PHR2 472 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 MFSD7Q6UXD7 560 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 SYTL1Q8IYJ3 562 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms