RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 EXD3Q8N9H8 876 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 LSM14AQ8ND56 463 aaKnown RBP4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 ATL2Q8NHH9 583 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 WDR48Q8TAF3 677 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 PIH1D2Q8WWB5 315 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 EXTL1Q92935 676 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 SCAMP4Q969E2 229 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 GRAMD1AQ96CP6 724 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 NUS1Q96E22 293 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 RNF31Q96EP0 1072 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 LIN37Q96GY3 246 aaPredicted RBP4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 CSPG4P5Q96PW8 444 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 NUDCD1Q96RS6 583 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 CCNL2Q96S94 520 aaPredicted RBP4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 SEMA3CQ99985 751 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 NUDT22Q9BRQ3 303 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 NUP85Q9BW27 656 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 SPATA9Q9BWV2 254 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 TEX101Q9BY14 249 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 STRADBQ9C0K7 418 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 NAT10Q9H0A0 1025 aaKnown RBP4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 ISCUQ9H1K1 167 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 ABCG8Q9H221 673 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 WDR26Q9H7D7 661 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 PCDH18Q9HCL0 1135 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 MRPL47Q9HD33 250 aaKnown RBP4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 NT5MQ9NPB1 228 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 PHPT1Q9NRX4 125 aaPredicted RBP4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 DONSONQ9NYP3 566 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 FOXJ2Q9P0K8 574 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 TMEM9Q9P0T7 183 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 TAAR2Q9P1P5 351 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 APPL1Q9UKG1 709 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 MYO6Q9UM54 1294 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 PHTF1Q9UMS5 762 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 SUFUQ9UMX1 484 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 CHKBQ9Y259 395 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 PRKAB1Q9Y478 270 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 LOXL2Q9Y4K0 774 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 PCYT1BQ9Y5K3 369 aaPredicted RBP4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 CAPN6Q9Y6Q1 641 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 SEC16AO15027 2179 aa4.67□□□□□ -1.66
GTF3C3-208ENST00000455546 NBEAQ8NFP9 2946 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 MDC1Q14676 2089 aaKnown RBP4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 MED13Q9UHV7 2174 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 IGHV5-10-1A0A0J9YXX1 117 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 A0A1W2PQC6 194 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 RHPN2P1A8MT19 583 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 A8MU76 341 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 EIF3CLB5ME19 914 aaKnown RBP4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 B8ZZF3 427 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 TMX2-CTNND1H3BSU7 103 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 NUDT21O43809 227 aaKnown RBP4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 CLDN7O95471 211 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 PRAMEF1O95521 474 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 ASMTLO95671 621 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 EML2O95834 649 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 CPP00450 1065 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 PRLP01236 227 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 IGLV1-40P01703 118 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 PROCP04070 461 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 ATP1A1P05023 1023 aaKnown RBP4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 HOXC4P09017 264 aaPredicted RBP4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 MYBL1P10243 752 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 FGF3P11487 239 aaPredicted RBP4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 CYP2A6P11509 494 aaPredicted RBP4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 MYCLP1P12525 358 aaPredicted RBP4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 PNLIPP16233 465 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 KELP23276 732 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 CD1CP29017 333 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 CCKBRP32239 447 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 PCK1P35558 622 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 ADCY8P40145 1251 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 GPR1P46091 355 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 PPM1FP49593 454 aaPredicted RBP4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 UCNP55089 124 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 UBASH3AP57075 661 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 TAS2R40P59535 323 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 SLC25A11Q02978 314 aaKnown RBP4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 NIPAL4Q0D2K0 466 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 SLC10A2Q12908 348 aaPredicted RBP4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 NFATC3Q12968 1075 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 BIRC2Q13490 618 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 KRT81Q14533 505 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 DPY19L1Q2PZI1 675 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 CYP27C1Q4G0S4 372 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 TDRD12Q587J7 1177 aaKnown RBP4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 ANKRD20A8PQ5CZ79 823 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 CCDC122Q5T0U0 273 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 ZNF648Q5T619 568 aaPredicted RBP4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 ARMC12Q5T9G4 340 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 YOD1Q5VVQ6 348 aaPredicted RBP4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 FOXB2Q5VYV0 432 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 LRRC66Q68CR7 880 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 PPP1R2P3Q6NXS1 205 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 KDELC2Q7Z4H8 507 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 PIM3Q86V86 326 aa4.66□□□□□ -1.66
GTF3C3-208ENST00000455546 PSTKQ8IV42 348 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms