RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 FASTKD1Q53R41 847 aaKnown RBP15.71■□□□□ 0.11
SNX17-204ENST00000453453 NEPROQ6NW34 567 aa15.71■□□□□ 0.11
SNX17-204ENST00000453453 AFTPHQ6ULP2 937 aa15.71■□□□□ 0.11
SNX17-204ENST00000453453 CRTC1Q6UUV9 634 aa15.71■□□□□ 0.11
SNX17-204ENST00000453453 OR2T3Q8NH03 318 aa15.71■□□□□ 0.11
SNX17-204ENST00000453453 CPNE1Q99829 537 aa15.71■□□□□ 0.11
SNX17-204ENST00000453453 PCDH12Q9NPG4 1184 aa15.71■□□□□ 0.11
SNX17-204ENST00000453453 SMYD2Q9NRG4 433 aa15.71■□□□□ 0.11
SNX17-204ENST00000453453 IL17CQ9P0M4 197 aa15.71■□□□□ 0.11
SNX17-204ENST00000453453 WNT16Q9UBV4 365 aa15.71■□□□□ 0.11
SNX17-204ENST00000453453 SARDHQ9UL12 918 aa15.71■□□□□ 0.11
SNX17-204ENST00000453453 DNAJC16Q9Y2G8 782 aa15.71■□□□□ 0.11
SNX17-204ENST00000453453 SCN8AQ9UQD0 1980 aa15.71■□□□□ 0.11
SNX17-204ENST00000453453 XIRP2A4UGR9 3374 aa15.71■□□□□ 0.1
SNX17-204ENST00000453453 ANTXRLA6NF34 631 aa15.7■□□□□ 0.1
SNX17-204ENST00000453453 H2AFYO75367 372 aaKnown RBP15.7■□□□□ 0.1
SNX17-204ENST00000453453 CLDN7O95471 211 aa15.7■□□□□ 0.1
SNX17-204ENST00000453453 ITGAXP20702 1163 aa15.7■□□□□ 0.1
SNX17-204ENST00000453453 C5AR1P21730 350 aa15.7■□□□□ 0.1
SNX17-204ENST00000453453 PSMA3P25788 255 aa15.7■□□□□ 0.1
SNX17-204ENST00000453453 PEX2P28328 305 aa15.7■□□□□ 0.1
SNX17-204ENST00000453453 ADSLP30566 484 aaPredicted RBP15.7■□□□□ 0.1
SNX17-204ENST00000453453 FOLH1Q04609 750 aa15.7■□□□□ 0.1
SNX17-204ENST00000453453 CST6Q15828 149 aa15.7■□□□□ 0.1
SNX17-204ENST00000453453 LRRC73Q5JTD7 316 aa15.7■□□□□ 0.1
SNX17-204ENST00000453453 ZDHHC20Q5W0Z9 365 aa15.7■□□□□ 0.1
SNX17-204ENST00000453453 LRRC66Q68CR7 880 aa15.7■□□□□ 0.1
SNX17-204ENST00000453453 MRNIPQ6NTE8 343 aa15.7■□□□□ 0.1
SNX17-204ENST00000453453 RNF111Q6ZNA4 994 aa15.7■□□□□ 0.1
SNX17-204ENST00000453453 DPPA4Q7L190 304 aa15.7■□□□□ 0.1
SNX17-204ENST00000453453 CNTN4Q8IWV2 1026 aa15.7■□□□□ 0.1
SNX17-204ENST00000453453 UBALD2Q8IYN6 164 aa15.7■□□□□ 0.1
SNX17-204ENST00000453453 PQLC1Q8N2U9 271 aa15.7■□□□□ 0.1
SNX17-204ENST00000453453 ADCY4Q8NFM4 1077 aa15.7■□□□□ 0.1
SNX17-204ENST00000453453 RPLP0P6Q8NHW5 317 aa15.7■□□□□ 0.1
SNX17-204ENST00000453453 TRPC4APQ8TEL6 797 aa15.7■□□□□ 0.1
SNX17-204ENST00000453453 PYDC1Q8WXC3 89 aa15.7■□□□□ 0.1
SNX17-204ENST00000453453 RAB7BQ96AH8 199 aa15.7■□□□□ 0.1
SNX17-204ENST00000453453 ARRDC3Q96B67 414 aa15.7■□□□□ 0.1
SNX17-204ENST00000453453 CDKN2AIPNLQ96HQ2 116 aa15.7■□□□□ 0.1
SNX17-204ENST00000453453 TBATAQ96M53 351 aa15.7■□□□□ 0.1
SNX17-204ENST00000453453 HDAC8Q9BY41 377 aa15.7■□□□□ 0.1
SNX17-204ENST00000453453 PKD2L2Q9NZM6 624 aa15.7■□□□□ 0.1
SNX17-204ENST00000453453 ZNF106Q9H2Y7 1883 aaKnown RBP15.7■□□□□ 0.1
SNX17-204ENST00000453453 SPTBN5Q9NRC6 3674 aaKnown RBP15.7■□□□□ 0.1
SNX17-204ENST00000453453 CCDC162PA2VCL2 907 aa15.69■□□□□ 0.1
SNX17-204ENST00000453453 A8MX80 341 aa15.69■□□□□ 0.1
SNX17-204ENST00000453453 H0YJX3 145 aa15.69■□□□□ 0.1
SNX17-204ENST00000453453 H3BNX3 289 aa15.69■□□□□ 0.1
SNX17-204ENST00000453453 GOLGA8TH3BQL2 631 aa15.69■□□□□ 0.1
SNX17-204ENST00000453453 PLIN3O60664 434 aa15.69■□□□□ 0.1
SNX17-204ENST00000453453 PIAS1O75925 651 aa15.69■□□□□ 0.1
SNX17-204ENST00000453453 CAPNS1P04632 268 aa15.69■□□□□ 0.1
SNX17-204ENST00000453453 ADRB3P13945 408 aa15.69■□□□□ 0.1
SNX17-204ENST00000453453 CD72P21854 359 aa15.69■□□□□ 0.1
SNX17-204ENST00000453453 ARNTP27540 789 aa15.69■□□□□ 0.1
SNX17-204ENST00000453453 GP5P40197 560 aa15.69■□□□□ 0.1
SNX17-204ENST00000453453 ARSDP51689 593 aa15.69■□□□□ 0.1
SNX17-204ENST00000453453 CSE1LP55060 971 aaKnown RBP15.69■□□□□ 0.1
SNX17-204ENST00000453453 SLC25A3Q00325 362 aa15.69■□□□□ 0.1
SNX17-204ENST00000453453 SFSWAPQ12872 951 aaKnown RBP15.69■□□□□ 0.1
SNX17-204ENST00000453453 ILF2Q12905 390 aaKnown RBP15.69■□□□□ 0.1
SNX17-204ENST00000453453 PTPRCAPQ14761 206 aa15.69■□□□□ 0.1
SNX17-204ENST00000453453 PTPRRQ15256 657 aa15.69■□□□□ 0.1
SNX17-204ENST00000453453 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.69■□□□□ 0.1
SNX17-204ENST00000453453 GRTP1Q5TC63 336 aa15.69■□□□□ 0.1
SNX17-204ENST00000453453 ZNF470Q6ECI4 717 aa15.69■□□□□ 0.1
SNX17-204ENST00000453453 KIAA0408Q6ZU52 694 aa15.69■□□□□ 0.1
SNX17-204ENST00000453453 ERN2Q76MJ5 926 aaKnown RBP15.69■□□□□ 0.1
SNX17-204ENST00000453453 PTAR1Q7Z6K3 402 aaPredicted RBP15.69■□□□□ 0.1
SNX17-204ENST00000453453 STRA8Q7Z7C7 330 aa15.69■□□□□ 0.1
SNX17-204ENST00000453453 TSPAN33Q86UF1 283 aa15.69■□□□□ 0.1
SNX17-204ENST00000453453 SYNPOQ8N3V7 929 aa15.69■□□□□ 0.1
SNX17-204ENST00000453453 OR4L1Q8NH43 312 aa15.69■□□□□ 0.1
SNX17-204ENST00000453453 DLG3Q92796 817 aa15.69■□□□□ 0.1
SNX17-204ENST00000453453 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.69■□□□□ 0.1
SNX17-204ENST00000453453 ERLEC1Q96DZ1 483 aa15.69■□□□□ 0.1
SNX17-204ENST00000453453 MPP4Q96JB8 637 aa15.69■□□□□ 0.1
SNX17-204ENST00000453453 EBF4Q9BQW3 602 aa15.69■□□□□ 0.1
SNX17-204ENST00000453453 SLC13A1Q9BZW2 595 aa15.69■□□□□ 0.1
SNX17-204ENST00000453453 RBM38Q9H0Z9 239 aaKnown RBP15.69■□□□□ 0.1
SNX17-204ENST00000453453 BPIFA1Q9NP55 256 aa15.69■□□□□ 0.1
SNX17-204ENST00000453453 RAD18Q9NS91 495 aa15.69■□□□□ 0.1
SNX17-204ENST00000453453 CATSPERZQ9NTU4 200 aa15.69■□□□□ 0.1
SNX17-204ENST00000453453 CNOT11Q9UKZ1 510 aaKnown RBP15.69■□□□□ 0.1
SNX17-204ENST00000453453 MEI4A8MW99 385 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 H7C0S8 307 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 CCL22O00626 93 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 NEMP1O14524 444 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 PFDN6O15212 129 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 ADAM23O75077 832 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 CLPTM1O96005 669 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 GOT2P00505 430 aaKnown RBP15.68■□□□□ 0.1
SNX17-204ENST00000453453 SPRP35270 261 aaPredicted RBP15.68■□□□□ 0.1
SNX17-204ENST00000453453 MMP12P39900 470 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 IDH3AP50213 366 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 PTPN5P54829 565 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 TBL3Q12788 808 aaKnown RBP15.68■□□□□ 0.1
SNX17-204ENST00000453453 DLG1Q12959 904 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 MYBPC3Q14896 1274 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms