RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 SCARB1Q8WTV0 552 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 TMCO6Q96DC7 493 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 FAM118BQ9BPY3 351 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 CRNKL1Q9BZJ0 848 aaKnown RBP4.41□□□□□ -1.7
LINC00393-202ENST00000452852 EDEM3Q9BZQ6 932 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 TKTL2Q9H0I9 626 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 CHMP4BQ9H444 224 aaKnown RBP4.41□□□□□ -1.7
LINC00393-202ENST00000452852 PLK3Q9H4B4 646 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 ST6GALNAC4Q9H4F1 302 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 PLEKHA4Q9H4M7 779 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 ERVMER34-1Q9H9K5 563 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 ZNF304Q9HCX3 659 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 MLXIPLQ9NP71 852 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 PIH1D3Q9NQM4 214 aaKnown RBP4.41□□□□□ -1.7
LINC00393-202ENST00000452852 ABCF3Q9NUQ8 709 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 GRHL1Q9NZI5 618 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 SEC63Q9UGP8 760 aaKnown RBP4.41□□□□□ -1.7
LINC00393-202ENST00000452852 DBNLQ9UJU6 430 aaKnown RBP4.41□□□□□ -1.7
LINC00393-202ENST00000452852 TNFSF13BQ9Y275 285 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 FAM96BQ9Y3D0 163 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 CCL27Q9Y4X3 112 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 EMSYQ7Z589 1322 aa4.41□□□□□ -1.7
LINC00393-202ENST00000452852 MYH4Q9Y623 1939 aa4.4□□□□□ -1.7
LINC00393-202ENST00000452852 PARP14Q460N5 1801 aa4.4□□□□□ -1.7
LINC00393-202ENST00000452852 ZNF236Q9UL36 1845 aa4.4□□□□□ -1.7
LINC00393-202ENST00000452852 FAM237AA0A1B0GTK4 181 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 A0A1W2PPC1 479 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 CBY3A6NI87 242 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 CDRT15L2A8MXV6 281 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 PAPSS1O43252 624 aaPredicted RBP4.4□□□□□ -1.71
LINC00393-202ENST00000452852 MSI1O43347 362 aaKnown RBP4.4□□□□□ -1.71
LINC00393-202ENST00000452852 TGFB3P10600 412 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 ST6GAL1P15907 406 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 CPT2P23786 658 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 CIITAP33076 1130 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 PIK3CAP42336 1068 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 SOX2P48431 317 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 GRIK3Q13003 919 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 MTA1Q13330 715 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 CDC37Q16543 378 aaPredicted RBP4.4□□□□□ -1.71
LINC00393-202ENST00000452852 HIST2H2ACQ16777 129 aaPredicted RBP4.4□□□□□ -1.71
LINC00393-202ENST00000452852 PLK5Q496M5 336 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 ZNF805Q5CZA5 627 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 ZNF628Q5EBL2 1059 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 TCP11X2Q5H9J9 407 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 C9orf152Q5JTZ5 239 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 MFSD14CQ5VZR4 134 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 HIST2H2BCQ6DN03 193 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 HIST2H2BDQ6DRA6 164 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 DCLRE1AQ6PJP8 1040 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 GPR142Q7Z601 462 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 UBE2Q1Q7Z7E8 422 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 TRIM74Q86UV6 250 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 TRIM73Q86UV7 250 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 CCDC13Q8IYE1 715 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 CADM3Q8N126 398 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 HJURPQ8NCD3 748 aaPredicted RBP4.4□□□□□ -1.71
LINC00393-202ENST00000452852 RASSF8Q8NHQ8 419 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 OSR1Q8TAX0 266 aaPredicted RBP4.4□□□□□ -1.71
LINC00393-202ENST00000452852 DENND1AQ8TEH3 1009 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 FAR1Q8WVX9 515 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 KAT2AQ92830 837 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 MAP4K1Q92918 833 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 SECISBP2LQ93073 1101 aaKnown RBP4.4□□□□□ -1.71
LINC00393-202ENST00000452852 ZNF653Q96CK0 615 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 RMDN1Q96DB5 314 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 SIPA1Q96FS4 1042 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 TEFMQ96QE5 360 aaKnown RBP4.4□□□□□ -1.71
LINC00393-202ENST00000452852 OR2A14Q96R47 310 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 HIPK3Q9H422 1215 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 PDZD7Q9H5P4 517 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 C11orf49Q9H6J7 331 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 DNAJC18Q9H819 358 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 IL1RAPL2Q9NP60 686 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 ARGLU1Q9NWB6 273 aaPredicted RBP4.4□□□□□ -1.71
LINC00393-202ENST00000452852 ARHGEF38Q9NXL2 777 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 MARCH4Q9P2E8 410 aaPredicted RBP4.4□□□□□ -1.71
LINC00393-202ENST00000452852 GTF3C4Q9UKN8 822 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 PPIEQ9UNP9 301 aaKnown RBP4.4□□□□□ -1.71
LINC00393-202ENST00000452852 EXOC6BQ9Y2D4 811 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 AAR2Q9Y312 384 aaKnown RBP4.4□□□□□ -1.71
LINC00393-202ENST00000452852 LSM4Q9Y4Z0 139 aaKnown RBP4.4□□□□□ -1.71
LINC00393-202ENST00000452852 SNX5Q9Y5X3 404 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 UNC80Q8N2C7 3258 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 A0A0G2JMZ2 1700 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 ZBED9Q6R2W3 1325 aa4.4□□□□□ -1.71
LINC00393-202ENST00000452852 TMEM247A6NEH6 219 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 FAM157AC9JC47 383 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 E5RJQ4 531 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 TAF4O00268 1085 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 SCAMP1O15126 338 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 SLC7A4O43246 635 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 NDUFS3O75489 264 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 SLC25A12O75746 678 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 RNF8O76064 485 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 NFATC1O95644 943 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 TOP3BO95985 862 aaKnown RBP4.39□□□□□ -1.71
LINC00393-202ENST00000452852 ATP5BP06576 529 aaKnown RBP4.39□□□□□ -1.71
LINC00393-202ENST00000452852 MYBL1P10243 752 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 IFNAR1P17181 557 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms