RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 GIMAP7Q8NHV1 300 aa19.01■□□□□ 0.63
RPS28-202ENST00000449223 BIRC7Q96CA5 298 aa19.01■□□□□ 0.63
RPS28-202ENST00000449223 LINC00615Q96LM1 132 aaPredicted RBP19.01■□□□□ 0.63
RPS28-202ENST00000449223 GPR21Q99679 349 aa19.01■□□□□ 0.63
RPS28-202ENST00000449223 SYTL2Q9HCH5 934 aa19.01■□□□□ 0.63
RPS28-202ENST00000449223 PHPT1Q9NRX4 125 aaPredicted RBP19.01■□□□□ 0.63
RPS28-202ENST00000449223 MBD1Q9UIS9 605 aaPredicted RBP19.01■□□□□ 0.63
RPS28-202ENST00000449223 E5RI56 91 aa19■□□□□ 0.63
RPS28-202ENST00000449223 PRAMEF26H0Y7S4 382 aa19■□□□□ 0.63
RPS28-202ENST00000449223 FPGTO14772 594 aa19■□□□□ 0.63
RPS28-202ENST00000449223 CHUKO15111 745 aa19■□□□□ 0.63
RPS28-202ENST00000449223 MAGEC1O60732 1142 aa19■□□□□ 0.63
RPS28-202ENST00000449223 LILRB5O75023 590 aa19■□□□□ 0.63
RPS28-202ENST00000449223 CDK14O94921 469 aa19■□□□□ 0.63
RPS28-202ENST00000449223 ZWINTO95229 277 aa19■□□□□ 0.63
RPS28-202ENST00000449223 PFN3P60673 137 aa19■□□□□ 0.63
RPS28-202ENST00000449223 PDAP1Q13442 181 aaKnown RBP19■□□□□ 0.63
RPS28-202ENST00000449223 MPP2Q14168 576 aa19■□□□□ 0.63
RPS28-202ENST00000449223 ZNF460Q14592 562 aa19■□□□□ 0.63
RPS28-202ENST00000449223 TMEM207Q6UWW9 146 aa19■□□□□ 0.63
RPS28-202ENST00000449223 FAM160A2Q8N612 972 aaPredicted RBP19■□□□□ 0.63
RPS28-202ENST00000449223 FRMD1Q8N878 549 aa19■□□□□ 0.63
RPS28-202ENST00000449223 FAM76AQ8TAV0 307 aa19■□□□□ 0.63
RPS28-202ENST00000449223 DENND1AQ8TEH3 1009 aa19■□□□□ 0.63
RPS28-202ENST00000449223 FUBP1Q96AE4 644 aaKnown RBP19■□□□□ 0.63
RPS28-202ENST00000449223 ORAI3Q9BRQ5 295 aa19■□□□□ 0.63
RPS28-202ENST00000449223 TSSK1BQ9BXA7 367 aa19■□□□□ 0.63
RPS28-202ENST00000449223 LGR4Q9BXB1 951 aa19■□□□□ 0.63
RPS28-202ENST00000449223 SPATS2LQ9NUQ6 558 aaKnown RBP19■□□□□ 0.63
RPS28-202ENST00000449223 ATXN10Q9UBB4 475 aa19■□□□□ 0.63
RPS28-202ENST00000449223 CEP192Q8TEP8 1941 aa19■□□□□ 0.63
RPS28-202ENST00000449223 A0A1W2PPC4 97 aa19■□□□□ 0.63
RPS28-202ENST00000449223 IQCF5A8MTL0 148 aa19■□□□□ 0.63
RPS28-202ENST00000449223 METTL12A8MUP2 240 aa19■□□□□ 0.63
RPS28-202ENST00000449223 EIF3FO00303 357 aaPredicted RBP19■□□□□ 0.63
RPS28-202ENST00000449223 KLHL2O95198 593 aa19■□□□□ 0.63
RPS28-202ENST00000449223 FTH1P02794 183 aa19■□□□□ 0.63
RPS28-202ENST00000449223 CHRM3P20309 590 aa19■□□□□ 0.63
RPS28-202ENST00000449223 PGGT1BP53609 377 aa19■□□□□ 0.63
RPS28-202ENST00000449223 CTSCP53634 463 aa19■□□□□ 0.63
RPS28-202ENST00000449223 KIAA1024LP59773 190 aa19■□□□□ 0.63
RPS28-202ENST00000449223 YPEL5P62699 121 aa19■□□□□ 0.63
RPS28-202ENST00000449223 GBX1Q14549 363 aa19■□□□□ 0.63
RPS28-202ENST00000449223 TSNAXIP1Q2TAA8 658 aa19■□□□□ 0.63
RPS28-202ENST00000449223 KYAT3Q6YP21 454 aaKnown RBP19■□□□□ 0.63
RPS28-202ENST00000449223 GCNT7Q6ZNI0 430 aa19■□□□□ 0.63
RPS28-202ENST00000449223 ABI3BPQ7Z7G0 1075 aa19■□□□□ 0.63
RPS28-202ENST00000449223 TBC1D1Q86TI0 1168 aaPredicted RBP19■□□□□ 0.63
RPS28-202ENST00000449223 WDR5BQ86VZ2 330 aa19■□□□□ 0.63
RPS28-202ENST00000449223 C1orf210Q8IVY1 113 aa19■□□□□ 0.63
RPS28-202ENST00000449223 FAM174AQ8TBP5 190 aa19■□□□□ 0.63
RPS28-202ENST00000449223 LKAAEAR1Q8TD35 194 aa19■□□□□ 0.63
RPS28-202ENST00000449223 SGF29Q96ES7 293 aa19■□□□□ 0.63
RPS28-202ENST00000449223 PDLIM5Q96HC4 596 aaKnown RBP19■□□□□ 0.63
RPS28-202ENST00000449223 BMFQ96LC9 184 aa19■□□□□ 0.63
RPS28-202ENST00000449223 APOOQ9BUR5 198 aa19■□□□□ 0.63
RPS28-202ENST00000449223 VPS11Q9H270 941 aa19■□□□□ 0.63
RPS28-202ENST00000449223 FZD3Q9NPG1 666 aa19■□□□□ 0.63
RPS28-202ENST00000449223 TRMT6Q9UJA5 497 aaKnown RBP19■□□□□ 0.63
RPS28-202ENST00000449223 GRID1Q9ULK0 1009 aa19■□□□□ 0.63
RPS28-202ENST00000449223 PLLPQ9Y342 182 aa19■□□□□ 0.63
RPS28-202ENST00000449223 OR1A2Q9Y585 309 aa19■□□□□ 0.63
RPS28-202ENST00000449223 CCDC189A1A4V9 331 aa18.99■□□□□ 0.63
RPS28-202ENST00000449223 POM121BA6NF01 834 aa18.99■□□□□ 0.63
RPS28-202ENST00000449223 KPNA5O15131 536 aa18.99■□□□□ 0.63
RPS28-202ENST00000449223 LAMTOR5O43504 91 aa18.99■□□□□ 0.63
RPS28-202ENST00000449223 NUAK1O60285 661 aa18.99■□□□□ 0.63
RPS28-202ENST00000449223 NDUFS2O75306 463 aa18.99■□□□□ 0.63
RPS28-202ENST00000449223 SPAG7O75391 227 aa18.99■□□□□ 0.63
RPS28-202ENST00000449223 RPA3P35244 121 aaPredicted RBP18.99■□□□□ 0.63
RPS28-202ENST00000449223 ETV4P43268 484 aa18.99■□□□□ 0.63
RPS28-202ENST00000449223 IRF9Q00978 393 aa18.99■□□□□ 0.63
RPS28-202ENST00000449223 ZNF658BQ4V348 819 aaPredicted RBP18.99■□□□□ 0.63
RPS28-202ENST00000449223 ZNF648Q5T619 568 aaPredicted RBP18.99■□□□□ 0.63
RPS28-202ENST00000449223 PAQR3Q6TCH7 311 aa18.99■□□□□ 0.63
RPS28-202ENST00000449223 TRIM74Q86UV6 250 aa18.99■□□□□ 0.63
RPS28-202ENST00000449223 MAML2Q8IZL2 1156 aaPredicted RBP18.99■□□□□ 0.63
RPS28-202ENST00000449223 PLD6Q8N2A8 252 aaKnown RBP18.99■□□□□ 0.63
RPS28-202ENST00000449223 NKAPQ8N5F7 415 aaKnown RBP18.99■□□□□ 0.63
RPS28-202ENST00000449223 TMEM105Q8N8V8 129 aa18.99■□□□□ 0.63
RPS28-202ENST00000449223 TCP10LQ8TDR4 215 aa18.99■□□□□ 0.63
RPS28-202ENST00000449223 INPP5DQ92835 1189 aa18.99■□□□□ 0.63
RPS28-202ENST00000449223 FOXJ1Q92949 421 aa18.99■□□□□ 0.63
RPS28-202ENST00000449223 SCARF2Q96GP6 870 aaPredicted RBP18.99■□□□□ 0.63
RPS28-202ENST00000449223 GPR78Q96P69 363 aa18.99■□□□□ 0.63
RPS28-202ENST00000449223 SLC30A3Q99726 388 aa18.99■□□□□ 0.63
RPS28-202ENST00000449223 SLC13A1Q9BZW2 595 aa18.99■□□□□ 0.63
RPS28-202ENST00000449223 OR2AG1Q9H205 316 aa18.99■□□□□ 0.63
RPS28-202ENST00000449223 GPR27Q9NS67 375 aa18.99■□□□□ 0.63
RPS28-202ENST00000449223 GALPQ9UBC7 116 aa18.99■□□□□ 0.63
RPS28-202ENST00000449223 SLC17A4Q9Y2C5 497 aa18.99■□□□□ 0.63
RPS28-202ENST00000449223 KLHL33A6NCF5 533 aa18.98■□□□□ 0.63
RPS28-202ENST00000449223 FSBPO95073 299 aa18.98■□□□□ 0.63
RPS28-202ENST00000449223 TSPAN12O95859 305 aa18.98■□□□□ 0.63
RPS28-202ENST00000449223 ZNF8P17098 575 aaPredicted RBP18.98■□□□□ 0.63
RPS28-202ENST00000449223 AOAHP28039 575 aa18.98■□□□□ 0.63
RPS28-202ENST00000449223 GTF2H3Q13889 308 aa18.98■□□□□ 0.63
RPS28-202ENST00000449223 FAM83EQ2M2I3 478 aa18.98■□□□□ 0.63
RPS28-202ENST00000449223 ZNF547Q8IVP9 402 aa18.98■□□□□ 0.63
RPS28-202ENST00000449223 SIDT2Q8NBJ9 832 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms