RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 EIF3BP55884 814 aaKnown RBP11.69□□□□□ -0.54
RCL1-208ENST00000448872 GTF2H3Q13889 308 aa11.69□□□□□ -0.54
RCL1-208ENST00000448872 SLC29A2Q14542 456 aa11.69□□□□□ -0.54
RCL1-208ENST00000448872 ITIH4Q14624 930 aa11.69□□□□□ -0.54
RCL1-208ENST00000448872 ZNF549Q6P9A3 640 aa11.69□□□□□ -0.54
RCL1-208ENST00000448872 EMBQ6PCB8 327 aa11.69□□□□□ -0.54
RCL1-208ENST00000448872 PACS1Q6VY07 963 aa11.69□□□□□ -0.54
RCL1-208ENST00000448872 NAPRTQ6XQN6 538 aa11.69□□□□□ -0.54
RCL1-208ENST00000448872 CYS1Q717R9 158 aa11.69□□□□□ -0.54
RCL1-208ENST00000448872 RABEPKQ7Z6M1 372 aa11.69□□□□□ -0.54
RCL1-208ENST00000448872 STRA8Q7Z7C7 330 aa11.69□□□□□ -0.54
RCL1-208ENST00000448872 C11orf96Q7Z7L8 435 aa11.69□□□□□ -0.54
RCL1-208ENST00000448872 KRT222Q8N1A0 295 aa11.69□□□□□ -0.54
RCL1-208ENST00000448872 ACVR1CQ8NER5 493 aa11.69□□□□□ -0.54
RCL1-208ENST00000448872 CALML6Q8TD86 181 aa11.69□□□□□ -0.54
RCL1-208ENST00000448872 UBLCP1Q8WVY7 318 aaPredicted RBP11.69□□□□□ -0.54
RCL1-208ENST00000448872 BIRC8Q96P09 236 aa11.69□□□□□ -0.54
RCL1-208ENST00000448872 ELF4Q99607 663 aaPredicted RBP11.69□□□□□ -0.54
RCL1-208ENST00000448872 NDNQ99608 321 aa11.69□□□□□ -0.54
RCL1-208ENST00000448872 NUSAP1Q9BXS6 441 aaKnown RBP11.69□□□□□ -0.54
RCL1-208ENST00000448872 FUT8Q9BYC5 575 aa11.69□□□□□ -0.54
RCL1-208ENST00000448872 ACSS3Q9H6R3 686 aa11.69□□□□□ -0.54
RCL1-208ENST00000448872 GAREM1Q9H706 876 aa11.69□□□□□ -0.54
RCL1-208ENST00000448872 SEMA4GQ9NTN9 838 aa11.69□□□□□ -0.54
RCL1-208ENST00000448872 UCKL1Q9NWZ5 548 aa11.69□□□□□ -0.54
RCL1-208ENST00000448872 FAM8A1Q9UBU6 413 aa11.69□□□□□ -0.54
RCL1-208ENST00000448872 DGKBQ9Y6T7 804 aa11.69□□□□□ -0.54
RCL1-208ENST00000448872 PLXND1Q9Y4D7 1925 aa11.69□□□□□ -0.54
RCL1-208ENST00000448872 CFAP99D6REC4 459 aa11.68□□□□□ -0.54
RCL1-208ENST00000448872 PRMT5O14744 637 aaPredicted RBP11.68□□□□□ -0.54
RCL1-208ENST00000448872 TNFP01375 233 aa11.68□□□□□ -0.54
RCL1-208ENST00000448872 ZNF806P0C7X5 589 aa11.68□□□□□ -0.54
RCL1-208ENST00000448872 RALBP11234 206 aa11.68□□□□□ -0.54
RCL1-208ENST00000448872 NME1P15531 152 aaKnown RBP11.68□□□□□ -0.54
RCL1-208ENST00000448872 ZNF7P17097 686 aaPredicted RBP11.68□□□□□ -0.54
RCL1-208ENST00000448872 AK4P27144 223 aaPredicted RBP11.68□□□□□ -0.54
RCL1-208ENST00000448872 PHBP35232 272 aa11.68□□□□□ -0.54
RCL1-208ENST00000448872 LEPRP48357 1165 aaKnown RBP11.68□□□□□ -0.54
RCL1-208ENST00000448872 BNIP3Q12983 259 aa11.68□□□□□ -0.54
RCL1-208ENST00000448872 ZNF423Q2M1K9 1284 aa11.68□□□□□ -0.54
RCL1-208ENST00000448872 PRRT3Q5FWE3 981 aa11.68□□□□□ -0.54
RCL1-208ENST00000448872 RBM20Q5T481 1227 aaKnown RBP11.68□□□□□ -0.54
RCL1-208ENST00000448872 XKR5Q6UX68 686 aa11.68□□□□□ -0.54
RCL1-208ENST00000448872 CHST15Q7LFX5 561 aaPredicted RBP11.68□□□□□ -0.54
RCL1-208ENST00000448872 GALNT13Q8IUC8 556 aa11.68□□□□□ -0.54
RCL1-208ENST00000448872 LMNTD2Q8IXW0 634 aa11.68□□□□□ -0.54
RCL1-208ENST00000448872 LILRA3Q8N6C8 439 aaPredicted RBP11.68□□□□□ -0.54
RCL1-208ENST00000448872 ZBTB9Q96C00 473 aa11.68□□□□□ -0.54
RCL1-208ENST00000448872 OR2M4Q96R27 311 aa11.68□□□□□ -0.54
RCL1-208ENST00000448872 TCF12Q99081 682 aa11.68□□□□□ -0.54
RCL1-208ENST00000448872 TTC1Q99614 292 aa11.68□□□□□ -0.54
RCL1-208ENST00000448872 LRRC61Q9BV99 259 aa11.68□□□□□ -0.54
RCL1-208ENST00000448872 ZCCHC2Q9C0B9 1178 aaKnown RBP11.68□□□□□ -0.54
RCL1-208ENST00000448872 CLPBQ9H078 707 aa11.68□□□□□ -0.54
RCL1-208ENST00000448872 ERVMER34-1Q9H9K5 563 aa11.68□□□□□ -0.54
RCL1-208ENST00000448872 INTS10Q9NVR2 710 aaKnown RBP11.68□□□□□ -0.54
RCL1-208ENST00000448872 GALPQ9UBC7 116 aa11.68□□□□□ -0.54
RCL1-208ENST00000448872 GULP1Q9UBP9 304 aa11.68□□□□□ -0.54
RCL1-208ENST00000448872 APOBEC3BQ9UH17 382 aaKnown RBP11.68□□□□□ -0.54
RCL1-208ENST00000448872 KCNK6Q9Y257 313 aa11.68□□□□□ -0.54
RCL1-208ENST00000448872 DNAJC16Q9Y2G8 782 aa11.68□□□□□ -0.54
RCL1-208ENST00000448872 A0A087WUV0 522 aaPredicted RBP11.67□□□□□ -0.54
RCL1-208ENST00000448872 NIPSNAP2O75323 286 aa11.67□□□□□ -0.54
RCL1-208ENST00000448872 POP7O75817 140 aaKnown RBP11.67□□□□□ -0.54
RCL1-208ENST00000448872 TUBBP07437 444 aa11.67□□□□□ -0.54
RCL1-208ENST00000448872 ABHD2P08910 425 aa11.67□□□□□ -0.54
RCL1-208ENST00000448872 CD151P48509 253 aa11.67□□□□□ -0.54
RCL1-208ENST00000448872 PRLHRP49683 370 aa11.67□□□□□ -0.54
RCL1-208ENST00000448872 CTBSQ01459 385 aa11.67□□□□□ -0.54
RCL1-208ENST00000448872 BCL7AQ4VC05 210 aa11.67□□□□□ -0.54
RCL1-208ENST00000448872 RNF187Q5TA31 235 aaPredicted RBP11.67□□□□□ -0.54
RCL1-208ENST00000448872 ZNF449Q6P9G9 518 aa11.67□□□□□ -0.54
RCL1-208ENST00000448872 FAM83HQ6ZRV2 1179 aaPredicted RBP11.67□□□□□ -0.54
RCL1-208ENST00000448872 KIAA0408Q6ZU52 694 aa11.67□□□□□ -0.54
RCL1-208ENST00000448872 LRRTM4Q86VH4 590 aa11.67□□□□□ -0.54
RCL1-208ENST00000448872 NRROSQ86YC3 692 aa11.67□□□□□ -0.54
RCL1-208ENST00000448872 GATAD2AQ86YP4 633 aa11.67□□□□□ -0.54
RCL1-208ENST00000448872 ZNF548Q8NEK5 533 aaPredicted RBP11.67□□□□□ -0.54
RCL1-208ENST00000448872 OR2W6PQ8NHA6 318 aa11.67□□□□□ -0.54
RCL1-208ENST00000448872 LMX1AQ8TE12 382 aa11.67□□□□□ -0.54
RCL1-208ENST00000448872 HEXDCQ8WVB3 486 aa11.67□□□□□ -0.54
RCL1-208ENST00000448872 CDKL2Q92772 493 aa11.67□□□□□ -0.54
RCL1-208ENST00000448872 CYTH2Q99418 400 aa11.67□□□□□ -0.54
RCL1-208ENST00000448872 MCMBPQ9BTE3 642 aa11.67□□□□□ -0.54
RCL1-208ENST00000448872 SLC13A1Q9BZW2 595 aa11.67□□□□□ -0.54
RCL1-208ENST00000448872 MED16Q9Y2X0 877 aa11.67□□□□□ -0.54
RCL1-208ENST00000448872 PLXNA2O75051 1894 aa11.66□□□□□ -0.54
RCL1-208ENST00000448872 A0A1B0GTQ1 180 aa11.66□□□□□ -0.54
RCL1-208ENST00000448872 GPR89AB7ZAQ6 455 aa11.66□□□□□ -0.54
RCL1-208ENST00000448872 POC1B-GALNT4F8VUJ3 575 aa11.66□□□□□ -0.54
RCL1-208ENST00000448872 AP2A2O94973 939 aa11.66□□□□□ -0.54
RCL1-208ENST00000448872 TRIM16O95361 564 aa11.66□□□□□ -0.54
RCL1-208ENST00000448872 SYPP08247 313 aa11.66□□□□□ -0.54
RCL1-208ENST00000448872 GPR89BP0CG08 455 aa11.66□□□□□ -0.54
RCL1-208ENST00000448872 PKMP14618 531 aaKnown RBP11.66□□□□□ -0.54
RCL1-208ENST00000448872 RPS3P23396 243 aaKnown RBP eCLIP11.66□□□□□ -0.54
RCL1-208ENST00000448872 GCAP28676 217 aa11.66□□□□□ -0.54
RCL1-208ENST00000448872 PPARGP37231 505 aaPredicted RBP11.66□□□□□ -0.54
RCL1-208ENST00000448872 CDKN2DP55273 166 aa11.66□□□□□ -0.54
RCL1-208ENST00000448872 TIAL1Q01085 375 aaKnown RBP eCLIP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms