RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 CARS2Q9HA77 564 aaKnown RBP17.16■□□□□ 0.34
SGCE-206ENST00000445866 PPCSQ9HAB8 311 aa17.16■□□□□ 0.34
SGCE-206ENST00000445866 GPR27Q9NS67 375 aa17.16■□□□□ 0.34
SGCE-206ENST00000445866 PRSS38A1L453 326 aa17.16■□□□□ 0.34
SGCE-206ENST00000445866 QSOX1O00391 747 aa17.16■□□□□ 0.34
SGCE-206ENST00000445866 CHUKO15111 745 aa17.16■□□□□ 0.34
SGCE-206ENST00000445866 SCAMP1O15126 338 aa17.16■□□□□ 0.34
SGCE-206ENST00000445866 SGTAO43765 313 aa17.16■□□□□ 0.34
SGCE-206ENST00000445866 KRT38O76015 456 aa17.16■□□□□ 0.34
SGCE-206ENST00000445866 TNFP01375 233 aa17.16■□□□□ 0.34
SGCE-206ENST00000445866 ITGB6P18564 788 aa17.16■□□□□ 0.34
SGCE-206ENST00000445866 GNPDA1P46926 289 aa17.16■□□□□ 0.34
SGCE-206ENST00000445866 LIMK2P53671 638 aa17.16■□□□□ 0.34
SGCE-206ENST00000445866 ALG11Q2TAA5 492 aa17.16■□□□□ 0.34
SGCE-206ENST00000445866 CTSL3PQ5NE16 218 aa17.16■□□□□ 0.34
SGCE-206ENST00000445866 KCTD16Q68DU8 428 aa17.16■□□□□ 0.34
SGCE-206ENST00000445866 RABEPKQ7Z6M1 372 aa17.16■□□□□ 0.34
SGCE-206ENST00000445866 LRRTM4Q86VH4 590 aa17.16■□□□□ 0.34
SGCE-206ENST00000445866 GALNT13Q8IUC8 556 aa17.16■□□□□ 0.34
SGCE-206ENST00000445866 FAM136AQ96C01 138 aa17.16■□□□□ 0.34
SGCE-206ENST00000445866 SCARF2Q96GP6 870 aaPredicted RBP17.16■□□□□ 0.34
SGCE-206ENST00000445866 CCM2Q9BSQ5 444 aa17.16■□□□□ 0.34
SGCE-206ENST00000445866 DHRS4Q9BTZ2 278 aa17.16■□□□□ 0.34
SGCE-206ENST00000445866 DNAJC28Q9NX36 388 aa17.16■□□□□ 0.34
SGCE-206ENST00000445866 PSMC3IPQ9P2W1 217 aaPredicted RBP17.16■□□□□ 0.34
SGCE-206ENST00000445866 TBK1Q9UHD2 729 aa17.16■□□□□ 0.34
SGCE-206ENST00000445866 ZNF180Q9UJW8 692 aa17.16■□□□□ 0.34
SGCE-206ENST00000445866 SLC39A10Q9ULF5 831 aa17.16■□□□□ 0.34
SGCE-206ENST00000445866 CORO1CQ9ULV4 474 aaPredicted RBP17.16■□□□□ 0.34
SGCE-206ENST00000445866 SMG5Q9UPR3 1016 aaKnown RBP17.16■□□□□ 0.34
SGCE-206ENST00000445866 COMMD10Q9Y6G5 202 aa17.16■□□□□ 0.34
SGCE-206ENST00000445866 E5RI56 91 aa17.15■□□□□ 0.34
SGCE-206ENST00000445866 KMOO15229 486 aa17.15■□□□□ 0.34
SGCE-206ENST00000445866 ITGA2BP08514 1039 aa17.15■□□□□ 0.34
SGCE-206ENST00000445866 EIF2B5Q13144 721 aaKnown RBP17.15■□□□□ 0.34
SGCE-206ENST00000445866 USP10Q14694 798 aaKnown RBP17.15■□□□□ 0.34
SGCE-206ENST00000445866 KIF19Q2TAC6 998 aa17.15■□□□□ 0.34
SGCE-206ENST00000445866 PYCR3Q53H96 274 aa17.15■□□□□ 0.34
SGCE-206ENST00000445866 RBM20Q5T481 1227 aaKnown RBP17.15■□□□□ 0.34
SGCE-206ENST00000445866 HECTD2Q5U5R9 776 aa17.15■□□□□ 0.34
SGCE-206ENST00000445866 PEAR1Q5VY43 1037 aaPredicted RBP17.15■□□□□ 0.34
SGCE-206ENST00000445866 LRIG3Q6UXM1 1119 aa17.15■□□□□ 0.34
SGCE-206ENST00000445866 TAOK1Q7L7X3 1001 aa17.15■□□□□ 0.34
SGCE-206ENST00000445866 PARGQ86W56 976 aa17.15■□□□□ 0.34
SGCE-206ENST00000445866 ZNF547Q8IVP9 402 aa17.15■□□□□ 0.34
SGCE-206ENST00000445866 KRT222Q8N1A0 295 aa17.15■□□□□ 0.34
SGCE-206ENST00000445866 ACVR1CQ8NER5 493 aa17.15■□□□□ 0.34
SGCE-206ENST00000445866 EPS8L3Q8TE67 593 aaKnown RBP17.15■□□□□ 0.34
SGCE-206ENST00000445866 ANKRD7Q92527 254 aa17.15■□□□□ 0.34
SGCE-206ENST00000445866 TSSK1BQ9BXA7 367 aa17.15■□□□□ 0.34
SGCE-206ENST00000445866 SARS2Q9NP81 518 aaKnown RBP17.15■□□□□ 0.34
SGCE-206ENST00000445866 PCYT1BQ9Y5K3 369 aaPredicted RBP17.15■□□□□ 0.34
SGCE-206ENST00000445866 BPTFQ12830 3046 aa17.15■□□□□ 0.34
SGCE-206ENST00000445866 ANKRD36A6QL64 1941 aa17.15■□□□□ 0.34
SGCE-206ENST00000445866 FAM95CA0A1B0GW59 222 aa17.14■□□□□ 0.33
SGCE-206ENST00000445866 NIPSNAP2O75323 286 aa17.14■□□□□ 0.33
SGCE-206ENST00000445866 KRT37O76014 449 aa17.14■□□□□ 0.33
SGCE-206ENST00000445866 RASGRP1O95267 797 aa17.14■□□□□ 0.33
SGCE-206ENST00000445866 FTH1P02794 183 aa17.14■□□□□ 0.33
SGCE-206ENST00000445866 SNRPAP09012 282 aaKnown RBP17.14■□□□□ 0.33
SGCE-206ENST00000445866 SLC12A2P55011 1212 aa17.14■□□□□ 0.33
SGCE-206ENST00000445866 BMPR2Q13873 1038 aa17.14■□□□□ 0.33
SGCE-206ENST00000445866 BCL7AQ4VC05 210 aa17.14■□□□□ 0.33
SGCE-206ENST00000445866 CEP85LQ5SZL2 805 aa17.14■□□□□ 0.33
SGCE-206ENST00000445866 LAIR1Q6GTX8 287 aa17.14■□□□□ 0.33
SGCE-206ENST00000445866 CHST15Q7LFX5 561 aaPredicted RBP17.14■□□□□ 0.33
SGCE-206ENST00000445866 TDRPQ86YL5 185 aa17.14■□□□□ 0.33
SGCE-206ENST00000445866 DCLK2Q8N568 766 aa17.14■□□□□ 0.33
SGCE-206ENST00000445866 PDXPQ96GD0 296 aa17.14■□□□□ 0.33
SGCE-206ENST00000445866 TMEM109Q9BVC6 243 aa17.14■□□□□ 0.33
SGCE-206ENST00000445866 KCNH6Q9H252 994 aa17.14■□□□□ 0.33
SGCE-206ENST00000445866 TM7SF3Q9NS93 570 aa17.14■□□□□ 0.33
SGCE-206ENST00000445866 TAS2R13Q9NYV9 303 aa17.14■□□□□ 0.33
SGCE-206ENST00000445866 GALPQ9UBC7 116 aa17.14■□□□□ 0.33
SGCE-206ENST00000445866 PNMA8BQ9ULN7 279 aaPredicted RBP17.14■□□□□ 0.33
SGCE-206ENST00000445866 SLC6A14Q9UN76 642 aa17.14■□□□□ 0.33
SGCE-206ENST00000445866 PCDHGA5Q9Y5G8 931 aa17.14■□□□□ 0.33
SGCE-206ENST00000445866 SNX11Q9Y5W9 270 aa17.14■□□□□ 0.33
SGCE-206ENST00000445866 DNMT3AQ9Y6K1 912 aaPredicted RBP17.14■□□□□ 0.33
SGCE-206ENST00000445866 DGKBQ9Y6T7 804 aa17.14■□□□□ 0.33
SGCE-206ENST00000445866 PATE3B3GLJ2 98 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 DYNC1I1O14576 645 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 CDH16O75309 829 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 EPN2O95208 641 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 JUNDP17535 347 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 CNTFP26441 200 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 PBLDP30039 288 aaPredicted RBP17.13■□□□□ 0.33
SGCE-206ENST00000445866 PRLHRP49683 370 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 BLKP51451 505 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 HK3P52790 923 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 CDKN2DP55273 166 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 POU4F1Q01851 419 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 ZNF844Q08AG5 666 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 CCDC6Q16204 474 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 KRT71Q3SY84 523 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 TRIM61Q5EBN2 209 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 FAM45BPQ6NSW5 357 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 AMZ2Q86W34 360 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 FAM45AQ8TCE6 357 aa17.13■□□□□ 0.33
SGCE-206ENST00000445866 PANX3Q96QZ0 392 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms