RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 TMEM220Q6QAJ8 160 aa12.64□□□□□ -0.39
PDLIM2-212ENST00000443561 ZNF438Q7Z4V0 828 aa12.64□□□□□ -0.39
PDLIM2-212ENST00000443561 UNC5BQ8IZJ1 945 aa12.64□□□□□ -0.39
PDLIM2-212ENST00000443561 SFRP1Q8N474 314 aa12.64□□□□□ -0.39
PDLIM2-212ENST00000443561 ARL14Q8N4G2 192 aa12.64□□□□□ -0.39
PDLIM2-212ENST00000443561 CLDN19Q8N6F1 224 aa12.64□□□□□ -0.39
PDLIM2-212ENST00000443561 PPHLN1Q8NEY8 458 aaKnown RBP12.64□□□□□ -0.39
PDLIM2-212ENST00000443561 GDAP1Q8TB36 358 aa12.64□□□□□ -0.39
PDLIM2-212ENST00000443561 PEX13Q92968 403 aa12.64□□□□□ -0.39
PDLIM2-212ENST00000443561 TIMM29Q9BSF4 260 aa12.64□□□□□ -0.39
PDLIM2-212ENST00000443561 PRDM8Q9NQV8 689 aa12.64□□□□□ -0.39
PDLIM2-212ENST00000443561 KLC4Q9NSK0 619 aa12.64□□□□□ -0.39
PDLIM2-212ENST00000443561 ZDHHC3Q9NYG2 299 aa12.64□□□□□ -0.39
PDLIM2-212ENST00000443561 CRLS1Q9UJA2 301 aa12.64□□□□□ -0.39
PDLIM2-212ENST00000443561 TRBV23OR9-2A0A075B6M9 112 aa12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 A0A1W2PNU3 283 aaPredicted RBP12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 CPED1A4D0V7 1026 aa12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 FAM149AA5PLN7 773 aa12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 FAM221BA6H8Z2 402 aa12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 GOLGA8KD6RF30 607 aa12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 GOLGA8TH3BQL2 631 aa12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 NTN3O00634 580 aaPredicted RBP12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 KMOO15229 486 aa12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 OPA1O60313 960 aa12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 POP7O75817 140 aaKnown RBP12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 ITGA8P53708 1063 aa12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 UBE2IP63279 158 aaKnown RBP12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 SHC2P98077 582 aa12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 CFHR1Q03591 330 aa12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 DHX9Q08211 1270 aaKnown RBP12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 CAMK2BQ13554 666 aa12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 DHX34Q14147 1143 aaKnown RBP12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 FASTKD3Q14CZ7 662 aaKnown RBP12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 SKIDA1Q1XH10 827 aa12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 GPR33Q49SQ1 333 aa12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 DUPD1Q68J44 220 aa12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 KIAA0930Q6ICG6 404 aaPredicted RBP12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 IYDQ6PHW0 289 aa12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 AFTPHQ6ULP2 937 aa12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 PACS1Q6VY07 963 aa12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 SYDE1Q6ZW31 735 aaPredicted RBP12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 TMEM135Q86UB9 458 aa12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 HOOK3Q86VS8 718 aa12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 ZNF761Q86XN6 746 aaPredicted RBP12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 TRAPPC5Q8IUR0 188 aa12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 LRRN4CLQ8ND94 238 aa12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 ULK4Q96C45 1275 aa12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 LRRC45Q96CN5 670 aa12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 LINC00615Q96LM1 132 aaPredicted RBP12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 CCDC3Q9BQI4 270 aa12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 SCNM1Q9BWG6 230 aa12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 TRIM31Q9BZY9 425 aa12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 DPEP2Q9H4A9 486 aa12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 XAB2Q9HCS7 855 aaKnown RBP12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 BFARQ9NZS9 450 aa12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 ZNF624Q9P2J8 865 aaPredicted RBP12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 APOBEC2Q9Y235 224 aaKnown RBP12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 DNAJC16Q9Y2G8 782 aa12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 SNX24Q9Y343 169 aa12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 SLC30A1Q9Y6M5 507 aa12.63□□□□□ -0.39
PDLIM2-212ENST00000443561 CEP295Q9C0D2 2601 aa12.62□□□□□ -0.39
PDLIM2-212ENST00000443561 FAM237BA0A1B0GVD1 139 aa12.62□□□□□ -0.39
PDLIM2-212ENST00000443561 PMS2P1A4D2B8 440 aa12.62□□□□□ -0.39
PDLIM2-212ENST00000443561 B4GAT1O43505 415 aa12.62□□□□□ -0.39
PDLIM2-212ENST00000443561 URI1O94763 535 aaPredicted RBP12.62□□□□□ -0.39
PDLIM2-212ENST00000443561 GP1BAP07359 652 aa12.62□□□□□ -0.39
PDLIM2-212ENST00000443561 PBLDP30039 288 aaPredicted RBP12.62□□□□□ -0.39
PDLIM2-212ENST00000443561 AKT1P31749 480 aa12.62□□□□□ -0.39
PDLIM2-212ENST00000443561 SLC19A1P41440 591 aa12.62□□□□□ -0.39
PDLIM2-212ENST00000443561 DRG2P55039 364 aaKnown RBP12.62□□□□□ -0.39
PDLIM2-212ENST00000443561 CLCA4Q14CN2 919 aa12.62□□□□□ -0.39
PDLIM2-212ENST00000443561 INSCQ1MX18 579 aa12.62□□□□□ -0.39
PDLIM2-212ENST00000443561 ANKRD20A4Q4UJ75 823 aa12.62□□□□□ -0.39
PDLIM2-212ENST00000443561 ZNF789Q5FWF6 425 aa12.62□□□□□ -0.39
PDLIM2-212ENST00000443561 HES3Q5TGS1 186 aa12.62□□□□□ -0.39
PDLIM2-212ENST00000443561 ZDHHC24Q6UX98 284 aa12.62□□□□□ -0.39
PDLIM2-212ENST00000443561 TMPRSS7Q7RTY8 843 aa12.62□□□□□ -0.39
PDLIM2-212ENST00000443561 SPRED1Q7Z699 444 aa12.62□□□□□ -0.39
PDLIM2-212ENST00000443561 NOA1Q8NC60 698 aaKnown RBP12.62□□□□□ -0.39
PDLIM2-212ENST00000443561 GPR150Q8NGU9 434 aa12.62□□□□□ -0.39
PDLIM2-212ENST00000443561 OR4L1Q8NH43 312 aa12.62□□□□□ -0.39
PDLIM2-212ENST00000443561 RMDN2Q96LZ7 410 aa12.62□□□□□ -0.39
PDLIM2-212ENST00000443561 COPS8Q99627 209 aa12.62□□□□□ -0.39
PDLIM2-212ENST00000443561 P2RY12Q9H244 342 aa12.62□□□□□ -0.39
PDLIM2-212ENST00000443561 DOLKQ9UPQ8 538 aa12.62□□□□□ -0.39
PDLIM2-212ENST00000443561 WDFY3Q8IZQ1 3526 aa12.62□□□□□ -0.39
PDLIM2-212ENST00000443561 KNTC1P50748 2209 aa12.62□□□□□ -0.39
PDLIM2-212ENST00000443561 SNRNP200O75643 2136 aaKnown RBP12.61□□□□□ -0.39
PDLIM2-212ENST00000443561 ASPMQ8IZT6 3477 aa12.61□□□□□ -0.39
PDLIM2-212ENST00000443561 FAM187AA6NFU0 413 aa12.61□□□□□ -0.39
PDLIM2-212ENST00000443561 OR52A4PA6NMU1 304 aa12.61□□□□□ -0.39
PDLIM2-212ENST00000443561 EFCAB8A8MWE9 144 aa12.61□□□□□ -0.39
PDLIM2-212ENST00000443561 SNX2O60749 519 aa12.61□□□□□ -0.39
PDLIM2-212ENST00000443561 VAPBO95292 243 aa12.61□□□□□ -0.39
PDLIM2-212ENST00000443561 CAPNS1P04632 268 aa12.61□□□□□ -0.39
PDLIM2-212ENST00000443561 F3P13726 295 aa12.61□□□□□ -0.39
PDLIM2-212ENST00000443561 ATP1B2P14415 290 aaPredicted RBP12.61□□□□□ -0.39
PDLIM2-212ENST00000443561 GLB1P16278 677 aa12.61□□□□□ -0.39
PDLIM2-212ENST00000443561 MSH3P20585 1137 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms