RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 TMEM26Q6ZUK4 368 aa6.96□□□□□ -1.3
SSXP3-201ENST00000442971 STRADAQ7RTN6 431 aa6.96□□□□□ -1.3
SSXP3-201ENST00000442971 KMT5CQ86Y97 462 aa6.96□□□□□ -1.3
SSXP3-201ENST00000442971 D2HGDHQ8N465 521 aa6.96□□□□□ -1.3
SSXP3-201ENST00000442971 ARIH2OSQ8N7S6 290 aa6.96□□□□□ -1.3
SSXP3-201ENST00000442971 AVL9Q8NBF6 648 aa6.96□□□□□ -1.3
SSXP3-201ENST00000442971 SLC22A8Q8TCC7 542 aa6.96□□□□□ -1.3
SSXP3-201ENST00000442971 GCDHQ92947 438 aaPredicted RBP6.96□□□□□ -1.3
SSXP3-201ENST00000442971 ZNF396Q96N95 335 aaPredicted RBP6.96□□□□□ -1.3
SSXP3-201ENST00000442971 SERPINB11Q96P15 392 aa6.96□□□□□ -1.3
SSXP3-201ENST00000442971 PLIN2Q99541 437 aa6.96□□□□□ -1.3
SSXP3-201ENST00000442971 NT5C1AQ9BXI3 368 aa6.96□□□□□ -1.3
SSXP3-201ENST00000442971 RAB34Q9BZG1 259 aa6.96□□□□□ -1.3
SSXP3-201ENST00000442971 LRRC4Q9HBW1 653 aa6.96□□□□□ -1.3
SSXP3-201ENST00000442971 TBC1D29Q9UFV1 150 aa6.96□□□□□ -1.3
SSXP3-201ENST00000442971 SLC17A4Q9Y2C5 497 aa6.96□□□□□ -1.3
SSXP3-201ENST00000442971 A0A0D9SEW6 157 aa6.95□□□□□ -1.3
SSXP3-201ENST00000442971 TMEM89A2RUT3 159 aa6.95□□□□□ -1.3
SSXP3-201ENST00000442971 IKBKBO14920 756 aa6.95□□□□□ -1.3
SSXP3-201ENST00000442971 TTI1O43156 1089 aa6.95□□□□□ -1.3
SSXP3-201ENST00000442971 CNOT3O75175 753 aaKnown RBP6.95□□□□□ -1.3
SSXP3-201ENST00000442971 TBCAO75347 108 aaKnown RBP6.95□□□□□ -1.3
SSXP3-201ENST00000442971 CLDN11O75508 207 aa6.95□□□□□ -1.3
SSXP3-201ENST00000442971 POP4O95707 220 aaKnown RBP6.95□□□□□ -1.3
SSXP3-201ENST00000442971 RHOCP08134 193 aa6.95□□□□□ -1.3
SSXP3-201ENST00000442971 SLC2A4P14672 509 aa6.95□□□□□ -1.3
SSXP3-201ENST00000442971 GSPT1P15170 499 aaKnown RBP6.95□□□□□ -1.3
SSXP3-201ENST00000442971 MMP11P24347 488 aa6.95□□□□□ -1.3
SSXP3-201ENST00000442971 CCNFP41002 786 aa6.95□□□□□ -1.3
SSXP3-201ENST00000442971 NASPP49321 788 aaPredicted RBP6.95□□□□□ -1.3
SSXP3-201ENST00000442971 ARSEP51690 589 aa6.95□□□□□ -1.3
SSXP3-201ENST00000442971 PPP1CAP62136 330 aa6.95□□□□□ -1.3
SSXP3-201ENST00000442971 SLC20A2Q08357 652 aa6.95□□□□□ -1.3
SSXP3-201ENST00000442971 CLEC12BQ2HXU8 276 aa6.95□□□□□ -1.3
SSXP3-201ENST00000442971 ZNF766Q5HY98 468 aa6.95□□□□□ -1.3
SSXP3-201ENST00000442971 AGAP9Q5VTM2 703 aa6.95□□□□□ -1.3
SSXP3-201ENST00000442971 ZNF385CQ66K41 422 aaPredicted RBP6.95□□□□□ -1.3
SSXP3-201ENST00000442971 B4GALNT3Q6L9W6 998 aa6.95□□□□□ -1.3
SSXP3-201ENST00000442971 RETSATQ6NUM9 610 aa6.95□□□□□ -1.3
SSXP3-201ENST00000442971 IL17RELQ6ZVW7 336 aa6.95□□□□□ -1.3
SSXP3-201ENST00000442971 WDR53Q7Z5U6 358 aaPredicted RBP6.95□□□□□ -1.3
SSXP3-201ENST00000442971 GPBP1Q86WP2 473 aa6.95□□□□□ -1.3
SSXP3-201ENST00000442971 FBXL16Q8N461 479 aa6.95□□□□□ -1.3
SSXP3-201ENST00000442971 HPS1Q92902 700 aa6.95□□□□□ -1.3
SSXP3-201ENST00000442971 ACCSQ96QU6 501 aa6.95□□□□□ -1.3
SSXP3-201ENST00000442971 HERPUD2Q9BSE4 406 aa6.95□□□□□ -1.3
SSXP3-201ENST00000442971 TEX101Q9BY14 249 aa6.95□□□□□ -1.3
SSXP3-201ENST00000442971 SLC7A5P2Q9GIP4 190 aa6.95□□□□□ -1.3
SSXP3-201ENST00000442971 RAB33BQ9H082 229 aa6.95□□□□□ -1.3
SSXP3-201ENST00000442971 FN3KRPQ9HA64 309 aa6.95□□□□□ -1.3
SSXP3-201ENST00000442971 PCDH12Q9NPG4 1184 aa6.95□□□□□ -1.3
SSXP3-201ENST00000442971 SAMSN1Q9NSI8 373 aaKnown RBP6.95□□□□□ -1.3
SSXP3-201ENST00000442971 GMPR2Q9P2T1 348 aaKnown RBP6.95□□□□□ -1.3
SSXP3-201ENST00000442971 NDOR1Q9UHB4 597 aa6.95□□□□□ -1.3
SSXP3-201ENST00000442971 CPAMD8Q8IZJ3 1885 aa6.94□□□□□ -1.3
SSXP3-201ENST00000442971 DNAJC13O75165 2243 aa6.94□□□□□ -1.3
SSXP3-201ENST00000442971 ASPDHA6ND91 283 aa6.94□□□□□ -1.3
SSXP3-201ENST00000442971 OR5H15A6NDH6 313 aa6.94□□□□□ -1.3
SSXP3-201ENST00000442971 KCNU1A8MYU2 1149 aa6.94□□□□□ -1.3
SSXP3-201ENST00000442971 TULP2O00295 520 aa6.94□□□□□ -1.3
SSXP3-201ENST00000442971 CDC45O75419 566 aa6.94□□□□□ -1.3
SSXP3-201ENST00000442971 LCA5LO95447 670 aa6.94□□□□□ -1.3
SSXP3-201ENST00000442971 ADCY5O95622 1261 aa6.94□□□□□ -1.3
SSXP3-201ENST00000442971 ASS1P00966 412 aaKnown RBP6.94□□□□□ -1.3
SSXP3-201ENST00000442971 CYP2A7P20853 494 aa6.94□□□□□ -1.3
SSXP3-201ENST00000442971 SLC8A3P57103 927 aa6.94□□□□□ -1.3
SSXP3-201ENST00000442971 EVCP57679 992 aa6.94□□□□□ -1.3
SSXP3-201ENST00000442971 DAOAP59103 153 aa6.94□□□□□ -1.3
SSXP3-201ENST00000442971 UBE2IP63279 158 aaKnown RBP6.94□□□□□ -1.3
SSXP3-201ENST00000442971 ADCY2Q08462 1091 aa6.94□□□□□ -1.3
SSXP3-201ENST00000442971 ORC2Q13416 577 aaPredicted RBP6.94□□□□□ -1.3
SSXP3-201ENST00000442971 LRP8Q14114 963 aa6.94□□□□□ -1.3
SSXP3-201ENST00000442971 ACKR1Q16570 336 aa6.94□□□□□ -1.3
SSXP3-201ENST00000442971 TSGA10IPQ3SY00 556 aa6.94□□□□□ -1.3
SSXP3-201ENST00000442971 TUBB8Q3ZCM7 444 aa6.94□□□□□ -1.3
SSXP3-201ENST00000442971 PYCR3Q53H96 274 aa6.94□□□□□ -1.3
SSXP3-201ENST00000442971 ZC3H12AQ5D1E8 599 aaKnown RBP6.94□□□□□ -1.3
SSXP3-201ENST00000442971 L1TD1Q5T7N2 865 aaKnown RBP6.94□□□□□ -1.3
SSXP3-201ENST00000442971 SHISA2Q6UWI4 295 aa6.94□□□□□ -1.3
SSXP3-201ENST00000442971 KIRREL2Q6UWL6 708 aa6.94□□□□□ -1.3
SSXP3-201ENST00000442971 CHD1LQ86WJ1 897 aa6.94□□□□□ -1.3
SSXP3-201ENST00000442971 SLC13A5Q86YT5 568 aaPredicted RBP6.94□□□□□ -1.3
SSXP3-201ENST00000442971 SYCP3Q8IZU3 236 aa6.94□□□□□ -1.3
SSXP3-201ENST00000442971 SIX6OS1Q8N1H7 587 aa6.94□□□□□ -1.3
SSXP3-201ENST00000442971 TTC30BQ8N4P2 665 aa6.94□□□□□ -1.3
SSXP3-201ENST00000442971 DQX1Q8TE96 717 aaKnown RBP6.94□□□□□ -1.3
SSXP3-201ENST00000442971 ZFAND2BQ8WV99 257 aa6.94□□□□□ -1.3
SSXP3-201ENST00000442971 PSMF1Q92530 271 aa6.94□□□□□ -1.3
SSXP3-201ENST00000442971 ISG20Q96AZ6 181 aaKnown RBP6.94□□□□□ -1.3
SSXP3-201ENST00000442971 CALR3Q96L12 384 aaKnown RBP6.94□□□□□ -1.3
SSXP3-201ENST00000442971 STRA6Q9BX79 667 aa6.94□□□□□ -1.3
SSXP3-201ENST00000442971 AGXT2Q9BYV1 514 aa6.94□□□□□ -1.3
SSXP3-201ENST00000442971 RMI1Q9H9A7 625 aa6.94□□□□□ -1.3
SSXP3-201ENST00000442971 TAS2R14Q9NYV8 317 aa6.94□□□□□ -1.3
SSXP3-201ENST00000442971 CDC23Q9UJX2 597 aa6.94□□□□□ -1.3
SSXP3-201ENST00000442971 ING1Q9UK53 422 aaPredicted RBP6.94□□□□□ -1.3
SSXP3-201ENST00000442971 COL7A1Q02388 2944 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 A0A0G2JNJ9 132 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 A0A1B0GTH9 108 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 OR5K4A6NMS3 321 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms