RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 KHDC1Q4VXA5 237 aaKnown RBP20.39■□□□□ 0.85
CPNE1-219ENST00000440240 PTRH1Q86Y79 214 aaKnown RBP20.39■□□□□ 0.85
CPNE1-219ENST00000440240 TRAPPC5Q8IUR0 188 aa20.39■□□□□ 0.85
CPNE1-219ENST00000440240 STARD8Q92502 1023 aa20.39■□□□□ 0.85
CPNE1-219ENST00000440240 ZNF768Q9H5H4 540 aaKnown RBP20.39■□□□□ 0.85
CPNE1-219ENST00000440240 EPHA6Q9UF33 1036 aa20.39■□□□□ 0.85
CPNE1-219ENST00000440240 TMPRSS11EQ9UL52 423 aa20.39■□□□□ 0.85
CPNE1-219ENST00000440240 PCDHB3Q9Y5E6 796 aa20.39■□□□□ 0.85
CPNE1-219ENST00000440240 RPS6KL1Q9Y6S9 549 aa20.39■□□□□ 0.85
CPNE1-219ENST00000440240 COMTP21964 271 aa20.38■□□□□ 0.85
CPNE1-219ENST00000440240 CDKN2BP42772 138 aa20.38■□□□□ 0.85
CPNE1-219ENST00000440240 SEPHS1P49903 392 aa20.38■□□□□ 0.85
CPNE1-219ENST00000440240 WNT3AP56704 352 aa20.38■□□□□ 0.85
CPNE1-219ENST00000440240 TLE1Q04724 770 aa20.38■□□□□ 0.85
CPNE1-219ENST00000440240 TAZQ16635 292 aa20.38■□□□□ 0.85
CPNE1-219ENST00000440240 CYB5D1Q6P9G0 228 aa20.38■□□□□ 0.85
CPNE1-219ENST00000440240 C6orf15Q6UXA7 325 aaPredicted RBP20.38■□□□□ 0.85
CPNE1-219ENST00000440240 VSTM4Q8IW00 320 aa20.38■□□□□ 0.85
CPNE1-219ENST00000440240 COL26A1Q96A83 441 aa20.38■□□□□ 0.85
CPNE1-219ENST00000440240 OR6C1Q96RD1 312 aa20.38■□□□□ 0.85
CPNE1-219ENST00000440240 VAT1Q99536 393 aa20.38■□□□□ 0.85
CPNE1-219ENST00000440240 ZCCHC2Q9C0B9 1178 aaKnown RBP20.38■□□□□ 0.85
CPNE1-219ENST00000440240 RAB33BQ9H082 229 aa20.38■□□□□ 0.85
CPNE1-219ENST00000440240 IL26Q9NPH9 171 aa20.38■□□□□ 0.85
CPNE1-219ENST00000440240 HACD3Q9P035 362 aa20.38■□□□□ 0.85
CPNE1-219ENST00000440240 SAE1Q9UBE0 346 aaPredicted RBP20.38■□□□□ 0.85
CPNE1-219ENST00000440240 ANAPC2Q9UJX6 822 aa20.38■□□□□ 0.85
CPNE1-219ENST00000440240 OR52A4PA6NMU1 304 aa20.37■□□□□ 0.85
CPNE1-219ENST00000440240 CST8O60676 142 aa20.37■□□□□ 0.85
CPNE1-219ENST00000440240 MFAP3LO75121 409 aa20.37■□□□□ 0.85
CPNE1-219ENST00000440240 CD68P34810 354 aaPredicted RBP20.37■□□□□ 0.85
CPNE1-219ENST00000440240 CAPZBP47756 277 aa20.37■□□□□ 0.85
CPNE1-219ENST00000440240 LEPRP48357 1165 aaKnown RBP20.37■□□□□ 0.85
CPNE1-219ENST00000440240 DRG2P55039 364 aaKnown RBP20.37■□□□□ 0.85
CPNE1-219ENST00000440240 WASHC5Q12768 1159 aa20.37■□□□□ 0.85
CPNE1-219ENST00000440240 SEPT6Q14141 434 aa20.37■□□□□ 0.85
CPNE1-219ENST00000440240 GPR18Q14330 331 aa20.37■□□□□ 0.85
CPNE1-219ENST00000440240 DEFB109BQ30KR1 87 aa20.37■□□□□ 0.85
CPNE1-219ENST00000440240 CACHD1Q5VU97 1274 aa20.37■□□□□ 0.85
CPNE1-219ENST00000440240 C16orf46Q6P387 395 aa20.37■□□□□ 0.85
CPNE1-219ENST00000440240 PRSS42Q7Z5A4 293 aa20.37■□□□□ 0.85
CPNE1-219ENST00000440240 C11orf96Q7Z7L8 435 aa20.37■□□□□ 0.85
CPNE1-219ENST00000440240 AMZ2Q86W34 360 aa20.37■□□□□ 0.85
CPNE1-219ENST00000440240 C9orf43Q8TAL5 461 aaPredicted RBP20.37■□□□□ 0.85
CPNE1-219ENST00000440240 KLHL6Q8WZ60 621 aa20.37■□□□□ 0.85
CPNE1-219ENST00000440240 P3H4Q92791 437 aa20.37■□□□□ 0.85
CPNE1-219ENST00000440240 TRIM10Q9UDY6 481 aa20.37■□□□□ 0.85
CPNE1-219ENST00000440240 HYOU1Q9Y4L1 999 aa20.37■□□□□ 0.85
CPNE1-219ENST00000440240 DNMT3AQ9Y6K1 912 aaPredicted RBP20.37■□□□□ 0.85
CPNE1-219ENST00000440240 NFKB1P19838 968 aa20.36■□□□□ 0.85
CPNE1-219ENST00000440240 OAS2P29728 719 aaKnown RBP20.36■□□□□ 0.85
CPNE1-219ENST00000440240 SPAM1P38567 509 aa20.36■□□□□ 0.85
CPNE1-219ENST00000440240 SH3BP2P78314 561 aa20.36■□□□□ 0.85
CPNE1-219ENST00000440240 SIRPB2Q5JXA9 342 aa20.36■□□□□ 0.85
CPNE1-219ENST00000440240 LDLRAP1Q5SW96 308 aa20.36■□□□□ 0.85
CPNE1-219ENST00000440240 KLHL35Q6PF15 583 aa20.36■□□□□ 0.85
CPNE1-219ENST00000440240 KDELC1Q6UW63 502 aa20.36■□□□□ 0.85
CPNE1-219ENST00000440240 PID1Q7Z2X4 250 aa20.36■□□□□ 0.85
CPNE1-219ENST00000440240 RASGRP3Q8IV61 690 aa20.36■□□□□ 0.85
CPNE1-219ENST00000440240 RSC1A1Q92681 617 aa20.36■□□□□ 0.85
CPNE1-219ENST00000440240 FCRL5Q96RD9 977 aa20.36■□□□□ 0.85
CPNE1-219ENST00000440240 IL17CQ9P0M4 197 aa20.36■□□□□ 0.85
CPNE1-219ENST00000440240 KLHL8Q9P2G9 620 aaPredicted RBP20.36■□□□□ 0.85
CPNE1-219ENST00000440240 KCTD3Q9Y597 815 aa20.36■□□□□ 0.85
CPNE1-219ENST00000440240 PSTPIP1O43586 416 aa20.35■□□□□ 0.85
CPNE1-219ENST00000440240 KIF1CO43896 1103 aaKnown RBP20.35■□□□□ 0.85
CPNE1-219ENST00000440240 POP7O75817 140 aaKnown RBP20.35■□□□□ 0.85
CPNE1-219ENST00000440240 ZRANB2O95218 330 aaKnown RBP eCLIP20.35■□□□□ 0.851e-6■■□□□ 12.9
CPNE1-219ENST00000440240 NDUFA10O95299 355 aa20.35■□□□□ 0.85
CPNE1-219ENST00000440240 CCNYL3P0C7X3 344 aa20.35■□□□□ 0.85
CPNE1-219ENST00000440240 FGF5P12034 268 aa20.35■□□□□ 0.85
CPNE1-219ENST00000440240 ZNF28P17035 718 aa20.35■□□□□ 0.85
CPNE1-219ENST00000440240 DLSTP36957 453 aa20.35■□□□□ 0.85
CPNE1-219ENST00000440240 DMPKQ09013 629 aa20.35■□□□□ 0.85
CPNE1-219ENST00000440240 PPP2R5EQ16537 467 aa20.35■□□□□ 0.85
CPNE1-219ENST00000440240 TFDP3Q5H9I0 405 aa20.35■□□□□ 0.85
CPNE1-219ENST00000440240 KAZNQ674X7 775 aa20.35■□□□□ 0.85
CPNE1-219ENST00000440240 SPOCD1Q6ZMY3 1216 aa20.35■□□□□ 0.85
CPNE1-219ENST00000440240 CNGA4Q8IV77 575 aa20.35■□□□□ 0.85
CPNE1-219ENST00000440240 TTC30BQ8N4P2 665 aa20.35■□□□□ 0.85
CPNE1-219ENST00000440240 SLC25A41Q8N5S1 370 aa20.35■□□□□ 0.85
CPNE1-219ENST00000440240 STAMBPL1Q96FJ0 436 aa20.35■□□□□ 0.85
CPNE1-219ENST00000440240 ABHD17AQ96GS6 310 aa20.35■□□□□ 0.85
CPNE1-219ENST00000440240 ZNF71Q9NQZ8 489 aaPredicted RBP20.35■□□□□ 0.85
CPNE1-219ENST00000440240 KCND3Q9UK17 655 aa20.35■□□□□ 0.85
CPNE1-219ENST00000440240 WDR37Q9Y2I8 494 aa20.35■□□□□ 0.85
CPNE1-219ENST00000440240 PKP3Q9Y446 797 aa20.35■□□□□ 0.85
CPNE1-219ENST00000440240 ALG6Q9Y672 507 aa20.35■□□□□ 0.85
CPNE1-219ENST00000440240 FLNCQ14315 2725 aa20.34■□□□□ 0.85
CPNE1-219ENST00000440240 NAV2Q8IVL1 2488 aa20.34■□□□□ 0.85
CPNE1-219ENST00000440240 NBASA2RRP1 2371 aa20.34■□□□□ 0.85
CPNE1-219ENST00000440240 GLYATL1P3A0A0U1RQE8 302 aa20.34■□□□□ 0.85
CPNE1-219ENST00000440240 GOLGA6L3A6NEY3 463 aa20.34■□□□□ 0.85
CPNE1-219ENST00000440240 UGT1A9O60656 530 aa20.34■□□□□ 0.85
CPNE1-219ENST00000440240 MT-ND3P03897 115 aa20.34■□□□□ 0.85
CPNE1-219ENST00000440240 PECAM1P16284 738 aaPredicted RBP20.34■□□□□ 0.85
CPNE1-219ENST00000440240 NELFEP18615 380 aaKnown RBP20.34■□□□□ 0.85
CPNE1-219ENST00000440240 UGT1A6P19224 532 aa20.34■□□□□ 0.85
CPNE1-219ENST00000440240 HLA-DPA1P20036 260 aa20.34■□□□□ 0.85
CPNE1-219ENST00000440240 UGT1A1P22309 533 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms