RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 GPR39O43194 453 aa19.54■□□□□ 0.72
SHROOM1-204ENST00000440118 CRTAMO95727 393 aa19.54■□□□□ 0.72
SHROOM1-204ENST00000440118 MSH3P20585 1137 aa19.54■□□□□ 0.72
SHROOM1-204ENST00000440118 LPOP22079 712 aaPredicted RBP19.54■□□□□ 0.72
SHROOM1-204ENST00000440118 PBLDP30039 288 aaPredicted RBP19.54■□□□□ 0.72
SHROOM1-204ENST00000440118 DRG2P55039 364 aaKnown RBP19.54■□□□□ 0.72
SHROOM1-204ENST00000440118 SQSTM1Q13501 440 aa19.54■□□□□ 0.72
SHROOM1-204ENST00000440118 TAF1AQ15573 450 aaPredicted RBP19.54■□□□□ 0.72
SHROOM1-204ENST00000440118 GPRC6AQ5T6X5 926 aa19.54■□□□□ 0.72
SHROOM1-204ENST00000440118 WDR74Q6RFH5 385 aaPredicted RBP19.54■□□□□ 0.72
SHROOM1-204ENST00000440118 TMEM139Q8IV31 216 aa19.54■□□□□ 0.72
SHROOM1-204ENST00000440118 TBL1YQ9BQ87 522 aa19.54■□□□□ 0.72
SHROOM1-204ENST00000440118 TBC1D10AQ9BXI6 508 aa19.54■□□□□ 0.72
SHROOM1-204ENST00000440118 C5orf60A6NFR6 353 aa19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 OR2AG2A6NM03 316 aa19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 K7ENP7 123 aa19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 UGT1A9O60656 530 aa19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 FGF3P11487 239 aaPredicted RBP19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 AMD1P17707 334 aa19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 UGT1A6P19224 532 aa19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 UGT1A1P22309 533 aa19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 UGT1A4P22310 534 aa19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 UGT1A3P35503 534 aa19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 ATP1A2P50993 1020 aa19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 RAB15P59190 212 aa19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 UBE2IP63279 158 aaKnown RBP19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 PDE1BQ01064 536 aa19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 CFHR1Q03591 330 aa19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 LONRF2Q1L5Z9 754 aa19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 INO80CQ6PI98 192 aaPredicted RBP19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 VASH2Q86V25 355 aa19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 AMZ2Q86W34 360 aa19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 PLXDC1Q8IUK5 500 aa19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 ZNF547Q8IVP9 402 aa19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 ZSCAN1Q8NBB4 408 aa19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 DDHD1Q8NEL9 900 aa19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 OR4K2Q8NGD2 314 aa19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 DTX3LQ8TDB6 740 aa19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 JPH3Q8WXH2 748 aaPredicted RBP19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 ASPSCR1Q9BZE9 553 aa19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 TSGA10Q9BZW7 698 aa19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 UGT1A7Q9HAW7 530 aa19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 UGT1A10Q9HAW8 530 aa19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 UGT1A8Q9HAW9 530 aa19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 POT1Q9NUX5 634 aa19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 TMPRSS11EQ9UL52 423 aa19.53■□□□□ 0.72
SHROOM1-204ENST00000440118 TK2O00142 265 aa19.52■□□□□ 0.72
SHROOM1-204ENST00000440118 TYRP1P17643 537 aa19.52■□□□□ 0.72
SHROOM1-204ENST00000440118 XRCC1P18887 633 aaPredicted RBP19.52■□□□□ 0.72
SHROOM1-204ENST00000440118 OLIG2Q13516 323 aa19.52■□□□□ 0.72
SHROOM1-204ENST00000440118 PTPRCAPQ14761 206 aa19.52■□□□□ 0.72
SHROOM1-204ENST00000440118 P3H1Q32P28 736 aa19.52■□□□□ 0.72
SHROOM1-204ENST00000440118 DCAF12Q5T6F0 453 aa19.52■□□□□ 0.72
SHROOM1-204ENST00000440118 SEL1L2Q5TEA6 688 aa19.52■□□□□ 0.72
SHROOM1-204ENST00000440118 KIAA1614Q5VZ46 1190 aa19.52■□□□□ 0.72
SHROOM1-204ENST00000440118 TMEM26Q6ZUK4 368 aa19.52■□□□□ 0.72
SHROOM1-204ENST00000440118 DET1Q7L5Y6 550 aa19.52■□□□□ 0.72
SHROOM1-204ENST00000440118 FAM71DQ8N9W8 422 aa19.52■□□□□ 0.72
SHROOM1-204ENST00000440118 LSM14AQ8ND56 463 aaKnown RBP19.52■□□□□ 0.72
SHROOM1-204ENST00000440118 ZNF398Q8TD17 642 aa19.52■□□□□ 0.72
SHROOM1-204ENST00000440118 GORASP1Q9BQQ3 440 aa19.52■□□□□ 0.72
SHROOM1-204ENST00000440118 DDA1Q9BW61 102 aa19.52■□□□□ 0.72
SHROOM1-204ENST00000440118 B3GNT4Q9C0J1 378 aa19.52■□□□□ 0.72
SHROOM1-204ENST00000440118 ASB8Q9H765 288 aa19.52■□□□□ 0.72
SHROOM1-204ENST00000440118 SMOXQ9NWM0 555 aa19.52■□□□□ 0.72
SHROOM1-204ENST00000440118 SCHIP1Q9P0W5 487 aaPredicted RBP19.52■□□□□ 0.72
SHROOM1-204ENST00000440118 FKBPLQ9UIM3 349 aa19.52■□□□□ 0.72
SHROOM1-204ENST00000440118 CRLS1Q9UJA2 301 aa19.52■□□□□ 0.72
SHROOM1-204ENST00000440118 SMG1Q96Q15 3661 aaKnown RBP19.52■□□□□ 0.72
SHROOM1-204ENST00000440118 OR52A4PA6NMU1 304 aa19.51■□□□□ 0.71
SHROOM1-204ENST00000440118 B4E171 279 aa19.51■□□□□ 0.71
SHROOM1-204ENST00000440118 KCNJ13O60928 360 aa19.51■□□□□ 0.71
SHROOM1-204ENST00000440118 UBXN7O94888 489 aa19.51■□□□□ 0.71
SHROOM1-204ENST00000440118 PRB1P04280 392 aa19.51■□□□□ 0.71
SHROOM1-204ENST00000440118 RALBP11234 206 aa19.51■□□□□ 0.71
SHROOM1-204ENST00000440118 TSPAN7P41732 249 aa19.51■□□□□ 0.71
SHROOM1-204ENST00000440118 TMPRSS15P98073 1019 aa19.51■□□□□ 0.71
SHROOM1-204ENST00000440118 SPARCL1Q14515 664 aa19.51■□□□□ 0.71
SHROOM1-204ENST00000440118 FNBP1LQ5T0N5 605 aa19.51■□□□□ 0.71
SHROOM1-204ENST00000440118 AGAP9Q5VTM2 703 aa19.51■□□□□ 0.71
SHROOM1-204ENST00000440118 TMEM220Q6QAJ8 160 aa19.51■□□□□ 0.71
SHROOM1-204ENST00000440118 RASGEF1AQ8N9B8 481 aa19.51■□□□□ 0.71
SHROOM1-204ENST00000440118 DCUN1D1Q96GG9 259 aa19.51■□□□□ 0.71
SHROOM1-204ENST00000440118 UCK1Q9HA47 277 aa19.51■□□□□ 0.71
SHROOM1-204ENST00000440118 OCIAD1Q9NX40 245 aa19.51■□□□□ 0.71
SHROOM1-204ENST00000440118 FAM8A1Q9UBU6 413 aa19.51■□□□□ 0.71
SHROOM1-204ENST00000440118 FEZ2Q9UHY8 353 aaPredicted RBP19.51■□□□□ 0.71
SHROOM1-204ENST00000440118 B3GALT1Q9Y5Z6 326 aa19.51■□□□□ 0.71
SHROOM1-204ENST00000440118 CAPN6Q9Y6Q1 641 aa19.51■□□□□ 0.71
SHROOM1-204ENST00000440118 A0A0U1RQJ8 604 aa19.5■□□□□ 0.71
SHROOM1-204ENST00000440118 POP7O75817 140 aaKnown RBP19.5■□□□□ 0.71
SHROOM1-204ENST00000440118 RASSF9O75901 435 aa19.5■□□□□ 0.71
SHROOM1-204ENST00000440118 SRP72O76094 671 aaKnown RBP19.5■□□□□ 0.71
SHROOM1-204ENST00000440118 ITGALP20701 1170 aa19.5■□□□□ 0.71
SHROOM1-204ENST00000440118 ADRA1AP35348 466 aa19.5■□□□□ 0.71
SHROOM1-204ENST00000440118 SLC19A1P41440 591 aa19.5■□□□□ 0.71
SHROOM1-204ENST00000440118 CTSCP53634 463 aa19.5■□□□□ 0.71
SHROOM1-204ENST00000440118 GSDMDP57764 484 aa19.5■□□□□ 0.71
SHROOM1-204ENST00000440118 C19orf57Q0VDD7 668 aa19.5■□□□□ 0.71
SHROOM1-204ENST00000440118 SEPT6Q14141 434 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms