RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 CDH4P55283 916 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 OXCT1P55809 520 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 RHOAP61586 193 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 CNTN1Q12860 1018 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 BMPR2Q13873 1038 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 RCN1Q15293 331 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 SMAD1Q15797 465 aaKnown RBP4.72□□□□□ -1.65
EDEM3-203ENST00000439962 HNRNPA1L2Q32P51 320 aaKnown RBP4.72□□□□□ -1.65
EDEM3-203ENST00000439962 MAP7D1Q3KQU3 841 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 KHDC1Q4VXA5 237 aaKnown RBP4.72□□□□□ -1.65
EDEM3-203ENST00000439962 C9orf64Q5T6V5 341 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 SEL1L3Q68CR1 1132 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 FBXL19Q6PCT2 694 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 HACD2Q6Y1H2 254 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 ACAD11Q709F0 780 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 TRMT11Q7Z4G4 463 aaKnown RBP4.72□□□□□ -1.65
EDEM3-203ENST00000439962 STRA8Q7Z7C7 330 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 SDCCAG8Q86SQ7 713 aaPredicted RBP4.72□□□□□ -1.65
EDEM3-203ENST00000439962 ZC3HC1Q86WB0 502 aaKnown RBP4.72□□□□□ -1.65
EDEM3-203ENST00000439962 CAMK1DQ8IU85 385 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 SLC22A9Q8IVM8 553 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 ALDH16A1Q8IZ83 802 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 SYNPOQ8N3V7 929 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 AADATQ8N5Z0 425 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 C2CD4AQ8NCU7 369 aaPredicted RBP4.72□□□□□ -1.65
EDEM3-203ENST00000439962 RBM15BQ8NDT2 890 aaKnown RBP4.72□□□□□ -1.65
EDEM3-203ENST00000439962 NAT14Q8WUY8 206 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 TADA1Q96BN2 335 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 ZNF669Q96BR6 464 aaPredicted RBP4.72□□□□□ -1.65
EDEM3-203ENST00000439962 VPS39Q96JC1 886 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 MAELQ96JY0 434 aaKnown RBP4.72□□□□□ -1.65
EDEM3-203ENST00000439962 RILPQ96NA2 401 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 ZNF599Q96NL3 588 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 TBL1YQ9BQ87 522 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 MRPL57Q9BQC6 102 aaKnown RBP4.72□□□□□ -1.65
EDEM3-203ENST00000439962 MLPHQ9BV36 600 aaPredicted RBP4.72□□□□□ -1.65
EDEM3-203ENST00000439962 SP110Q9HB58 689 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 EML4Q9HC35 981 aaKnown RBP4.72□□□□□ -1.65
EDEM3-203ENST00000439962 GLOD4Q9HC38 313 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 FBXO6Q9NRD1 293 aaPredicted RBP4.72□□□□□ -1.65
EDEM3-203ENST00000439962 TREX1Q9NSU2 369 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 NDUFA13Q9P0J0 144 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 MARK1Q9P0L2 795 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 NKX1-2Q9UD57 310 aaPredicted RBP4.72□□□□□ -1.65
EDEM3-203ENST00000439962 PCDHGC4Q9Y5F7 938 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 NYNRINQ9P2P1 1898 aaKnown RBP4.72□□□□□ -1.65
EDEM3-203ENST00000439962 UNC13CQ8NB66 2214 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 ARID1BQ8NFD5 2236 aaPredicted RBP4.72□□□□□ -1.65
EDEM3-203ENST00000439962 KALRNO60229 2985 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 IGLV3-10A0A075B6K4 115 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 TARM1B6A8C7 271 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 UGT1A9O60656 530 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 SEMA4FO95754 770 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 HSPA4LO95757 839 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 TOP3BO95985 862 aaKnown RBP4.72□□□□□ -1.65
EDEM3-203ENST00000439962 EPOP01588 193 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 RBP1P09455 135 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 PIRTP0C851 137 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 ANPEPP15144 967 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 PCSK2P16519 638 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 CD9P21926 228 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 XPAP23025 273 aaPredicted RBP4.72□□□□□ -1.65
EDEM3-203ENST00000439962 CES1P23141 567 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 EIF2DP41214 584 aaKnown RBP4.72□□□□□ -1.65
EDEM3-203ENST00000439962 P2RY2P41231 377 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 ID4P47928 161 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 RPL14P50914 215 aaKnown RBP4.72□□□□□ -1.65
EDEM3-203ENST00000439962 CCNHP51946 323 aaPredicted RBP4.72□□□□□ -1.65
EDEM3-203ENST00000439962 MTTPP55157 894 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 SESN2P58004 480 aaPredicted RBP4.72□□□□□ -1.65
EDEM3-203ENST00000439962 RPS14P62263 151 aaKnown RBP4.72□□□□□ -1.65
EDEM3-203ENST00000439962 ARF5P84085 180 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 NFKB2Q00653 900 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 MTM1Q13496 603 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 PSAPL1Q6NUJ1 521 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 TREML1Q86YW5 311 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 C10orf107Q8IVU9 208 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 ATPAF2Q8N5M1 289 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 CAMKK1Q8N5S9 505 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 TEX26Q8N6G2 289 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 RTL3Q8N8U3 475 aaKnown RBP4.72□□□□□ -1.65
EDEM3-203ENST00000439962 DEFB124Q8NES8 71 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 OR52K1Q8NGK4 314 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 OR2T3Q8NH03 318 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 DUS3LQ96G46 650 aaKnown RBP4.72□□□□□ -1.65
EDEM3-203ENST00000439962 MRGPRX3Q96LB0 322 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 SLC6A18Q96N87 628 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 KLHL32Q96NJ5 620 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 SLC39A8Q9C0K1 460 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 SLC25A51Q9H1U9 297 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 TMEM245Q9H330 911 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 UGT1A7Q9HAW7 530 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 UGT1A10Q9HAW8 530 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 UGT1A8Q9HAW9 530 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 S100A14Q9HCY8 104 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 C8orf4Q9NR00 106 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 NMRK1Q9NWW6 199 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 TMEM216Q9P0N5 145 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 SCOCQ9UIL1 159 aa4.72□□□□□ -1.65
EDEM3-203ENST00000439962 SLC27A6Q9Y2P4 619 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms