RNA–Protein interactions for RNA: ENST00000439009.1

LINC00578-201, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-201ENST00000439009 PCDH9Q9HC56 1237 aa7.75□□□□□ -1.17
LINC00578-201ENST00000439009 PCDH18Q9HCL0 1135 aa7.75□□□□□ -1.17
LINC00578-201ENST00000439009 CASS4Q9NQ75 786 aa7.75□□□□□ -1.17
LINC00578-201ENST00000439009 FANCLQ9NW38 375 aa7.75□□□□□ -1.17
LINC00578-201ENST00000439009 ERRFI1Q9UJM3 462 aaPredicted RBP7.75□□□□□ -1.17
LINC00578-201ENST00000439009 RARRES3Q9UL19 164 aa7.75□□□□□ -1.17
LINC00578-201ENST00000439009 POLEQ07864 2286 aa7.75□□□□□ -1.17
LINC00578-201ENST00000439009 CACNA1DQ01668 2161 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 SHANK1Q9Y566 2161 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 IGHV5-51A0A0C4DH38 117 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 C1orf232A0A0U1RR37 186 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 ATMINO43313 823 aaPredicted RBP7.74□□□□□ -1.17
LINC00578-201ENST00000439009 KCNJ13O60928 360 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 SLC25A14O95258 325 aaPredicted RBP7.74□□□□□ -1.17
LINC00578-201ENST00000439009 MMP2P08253 660 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 RAB40ALP0C0E4 278 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 MYBL1P10243 752 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 CCNCP24863 283 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 COL8A1P27658 744 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 ARSEP51690 589 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 ACY1Q03154 408 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 ITKQ08881 620 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 TUBB3Q13509 450 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 PAFAH1B3Q15102 231 aaKnown RBP7.74□□□□□ -1.17
LINC00578-201ENST00000439009 CRB2Q5IJ48 1285 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 SLC6A19Q695T7 634 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 TIGD7Q6NT04 549 aaPredicted RBP7.74□□□□□ -1.17
LINC00578-201ENST00000439009 FAM199XQ6PEV8 388 aaPredicted RBP7.74□□□□□ -1.17
LINC00578-201ENST00000439009 FAM92BQ6ZTR7 304 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 TMC3Q7Z5M5 1100 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 C11orf96Q7Z7L8 435 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 TRIM48Q8IWZ4 208 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 RHOT1Q8IXI2 618 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 SLC34A3Q8N130 599 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 D2HGDHQ8N465 521 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 TRAM1L1Q8N609 369 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 RBMXL3Q8N7X1 1067 aaKnown RBP7.74□□□□□ -1.17
LINC00578-201ENST00000439009 NIPA2Q8N8Q9 360 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 CCHCR1Q8TD31 782 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 PNPLA2Q96AD5 504 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 RNF31Q96EP0 1072 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 ZNF514Q96K75 400 aaPredicted RBP7.74□□□□□ -1.17
LINC00578-201ENST00000439009 PCMTD1Q96MG8 357 aaPredicted RBP7.74□□□□□ -1.17
LINC00578-201ENST00000439009 SMAD5Q99717 465 aaKnown RBP7.74□□□□□ -1.17
LINC00578-201ENST00000439009 BARD1Q99728 777 aaKnown RBP7.74□□□□□ -1.17
LINC00578-201ENST00000439009 ZSCAN5AQ9BUG6 496 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 MLPHQ9BV36 600 aaPredicted RBP7.74□□□□□ -1.17
LINC00578-201ENST00000439009 SLC29A3Q9BZD2 475 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 XPO4Q9C0E2 1151 aaKnown RBP7.74□□□□□ -1.17
LINC00578-201ENST00000439009 MRPL47Q9HD33 250 aaKnown RBP7.74□□□□□ -1.17
LINC00578-201ENST00000439009 ACSS2Q9NR19 701 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 LATS2Q9NRM7 1088 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 RAD18Q9NS91 495 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.74□□□□□ -1.17
LINC00578-201ENST00000439009 SPTLC3Q9NUV7 552 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 HAUS2Q9NVX0 235 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 RBM22Q9NW64 420 aaKnown RBP eCLIP7.74□□□□□ -1.17
LINC00578-201ENST00000439009 DTLQ9NZJ0 730 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 SCINQ9Y6U3 715 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 CSMD1Q96PZ7 3565 aa7.74□□□□□ -1.17
LINC00578-201ENST00000439009 ARGFXA6NJG6 315 aa7.73□□□□□ -1.17
LINC00578-201ENST00000439009 OR52A4PA6NMU1 304 aa7.73□□□□□ -1.17
LINC00578-201ENST00000439009 TMCO5BA8MYB1 307 aa7.73□□□□□ -1.17
LINC00578-201ENST00000439009 KIF2AO00139 706 aaPredicted RBP7.73□□□□□ -1.17
LINC00578-201ENST00000439009 DDX3XO00571 662 aaKnown RBP eCLIP7.73□□□□□ -1.17
LINC00578-201ENST00000439009 CPNE3O75131 537 aaKnown RBP7.73□□□□□ -1.17
LINC00578-201ENST00000439009 MTA2O94776 668 aa7.73□□□□□ -1.17
LINC00578-201ENST00000439009 POU3F2P20265 443 aaPredicted RBP7.73□□□□□ -1.17
LINC00578-201ENST00000439009 IDSP22304 550 aa7.73□□□□□ -1.17
LINC00578-201ENST00000439009 FECHP22830 423 aa7.73□□□□□ -1.17
LINC00578-201ENST00000439009 TNFRSF8P28908 595 aa7.73□□□□□ -1.17
LINC00578-201ENST00000439009 PRKCIP41743 596 aa7.73□□□□□ -1.17
LINC00578-201ENST00000439009 PTGIRP43119 386 aa7.73□□□□□ -1.17
LINC00578-201ENST00000439009 RPS18P62269 152 aaKnown RBP7.73□□□□□ -1.17
LINC00578-201ENST00000439009 TUBB4BP68371 445 aa7.73□□□□□ -1.17
LINC00578-201ENST00000439009 PDE1BQ01064 536 aa7.73□□□□□ -1.17
LINC00578-201ENST00000439009 SLC25A11Q02978 314 aaKnown RBP7.73□□□□□ -1.17
LINC00578-201ENST00000439009 UBXN1Q04323 297 aa7.73□□□□□ -1.17
LINC00578-201ENST00000439009 TUBB2AQ13885 445 aa7.73□□□□□ -1.17
LINC00578-201ENST00000439009 PIGHQ14442 188 aaPredicted RBP7.73□□□□□ -1.17
LINC00578-201ENST00000439009 KCNAB1Q14722 419 aa7.73□□□□□ -1.17
LINC00578-201ENST00000439009 SMTNL2Q2TAL5 461 aa7.73□□□□□ -1.17
LINC00578-201ENST00000439009 PRR30Q53SZ7 412 aaPredicted RBP7.73□□□□□ -1.17
LINC00578-201ENST00000439009 ZNF569Q5MCW4 686 aa7.73□□□□□ -1.17
LINC00578-201ENST00000439009 ZNF648Q5T619 568 aaPredicted RBP7.73□□□□□ -1.17
LINC00578-201ENST00000439009 C1QL3Q5VWW1 255 aa7.73□□□□□ -1.17
LINC00578-201ENST00000439009 TXNRD3NBQ6F5E7 133 aa7.73□□□□□ -1.17
LINC00578-201ENST00000439009 IRGCQ6NXR0 463 aa7.73□□□□□ -1.17
LINC00578-201ENST00000439009 KLHL35Q6PF15 583 aa7.73□□□□□ -1.17
LINC00578-201ENST00000439009 MED25Q71SY5 747 aa7.73□□□□□ -1.17
LINC00578-201ENST00000439009 ZNF571Q7Z3V5 609 aaPredicted RBP7.73□□□□□ -1.17
LINC00578-201ENST00000439009 LRRTM4Q86VH4 590 aa7.73□□□□□ -1.17
LINC00578-201ENST00000439009 CARFQ8N187 725 aa7.73□□□□□ -1.17
LINC00578-201ENST00000439009 TMEM102Q8N9M5 508 aaPredicted RBP7.73□□□□□ -1.17
LINC00578-201ENST00000439009 SIDT2Q8NBJ9 832 aaKnown RBP7.73□□□□□ -1.17
LINC00578-201ENST00000439009 SLC38A9Q8NBW4 561 aa7.73□□□□□ -1.17
LINC00578-201ENST00000439009 GPR26Q8NDV2 337 aa7.73□□□□□ -1.17
LINC00578-201ENST00000439009 LPCAT1Q8NF37 534 aa7.73□□□□□ -1.17
LINC00578-201ENST00000439009 FDCSPQ8NFU4 85 aa7.73□□□□□ -1.17
LINC00578-201ENST00000439009 PRR7Q8TB68 274 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms