RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 LAMB3Q13751 1172 aa14.52□□□□□ -0.09
HDAC8-213ENST00000436675 GPR19Q15760 415 aa14.52□□□□□ -0.09
HDAC8-213ENST00000436675 KHDC1Q4VXA5 237 aaKnown RBP14.52□□□□□ -0.09
HDAC8-213ENST00000436675 CCDC122Q5T0U0 273 aa14.52□□□□□ -0.09
HDAC8-213ENST00000436675 ALG1LQ6GMV1 187 aa14.52□□□□□ -0.09
HDAC8-213ENST00000436675 LCN10Q6JVE6 187 aa14.52□□□□□ -0.09
HDAC8-213ENST00000436675 ABRAXAS1Q6UWZ7 409 aa14.52□□□□□ -0.09
HDAC8-213ENST00000436675 ZNF571Q7Z3V5 609 aaPredicted RBP14.52□□□□□ -0.09
HDAC8-213ENST00000436675 TMEM126BQ8IUX1 230 aa14.52□□□□□ -0.09
HDAC8-213ENST00000436675 ZNF547Q8IVP9 402 aa14.52□□□□□ -0.09
HDAC8-213ENST00000436675 RAVER1Q8IY67 606 aaKnown RBP14.52□□□□□ -0.09
HDAC8-213ENST00000436675 ANKRD20A12PQ8NF67 263 aa14.52□□□□□ -0.09
HDAC8-213ENST00000436675 GPR150Q8NGU9 434 aa14.52□□□□□ -0.09
HDAC8-213ENST00000436675 UBXN4Q92575 508 aa14.52□□□□□ -0.09
HDAC8-213ENST00000436675 MAML1Q92585 1016 aa14.52□□□□□ -0.09
HDAC8-213ENST00000436675 GLYATL1Q969I3 302 aa14.52□□□□□ -0.09
HDAC8-213ENST00000436675 SLC41A2Q96JW4 573 aa14.52□□□□□ -0.09
HDAC8-213ENST00000436675 ZNF514Q96K75 400 aaPredicted RBP14.52□□□□□ -0.09
HDAC8-213ENST00000436675 ERGIC2Q96RQ1 377 aa14.52□□□□□ -0.09
HDAC8-213ENST00000436675 TIMM29Q9BSF4 260 aa14.52□□□□□ -0.09
HDAC8-213ENST00000436675 CHST8Q9H2A9 424 aa14.52□□□□□ -0.09
HDAC8-213ENST00000436675 HAUS4Q9H6D7 363 aa14.52□□□□□ -0.09
HDAC8-213ENST00000436675 WASH6PQ9NQA3 447 aa14.52□□□□□ -0.09
HDAC8-213ENST00000436675 EPHA6Q9UF33 1036 aa14.52□□□□□ -0.09
HDAC8-213ENST00000436675 RPL26L1Q9UNX3 145 aaKnown RBP14.52□□□□□ -0.09
HDAC8-213ENST00000436675 SCINQ9Y6U3 715 aa14.52□□□□□ -0.09
HDAC8-213ENST00000436675 FBN2P35556 2912 aa14.52□□□□□ -0.09
HDAC8-213ENST00000436675 C2CD3Q4AC94 2353 aa14.52□□□□□ -0.09
HDAC8-213ENST00000436675 OTOGQ6ZRI0 2925 aa14.51□□□□□ -0.09
HDAC8-213ENST00000436675 RGSL1A5PLK6 1076 aa14.51□□□□□ -0.09
HDAC8-213ENST00000436675 F5H423 210 aaPredicted RBP14.51□□□□□ -0.09
HDAC8-213ENST00000436675 CPNE3O75131 537 aaKnown RBP14.51□□□□□ -0.09
HDAC8-213ENST00000436675 SCRG1O75711 98 aa14.51□□□□□ -0.09
HDAC8-213ENST00000436675 TMEM63AO94886 807 aa14.51□□□□□ -0.09
HDAC8-213ENST00000436675 CDK11BP21127 795 aaKnown RBP14.51□□□□□ -0.09
HDAC8-213ENST00000436675 GJC1P36383 396 aa14.51□□□□□ -0.09
HDAC8-213ENST00000436675 ACY1Q03154 408 aa14.51□□□□□ -0.09
HDAC8-213ENST00000436675 GALNT2Q10471 571 aa14.51□□□□□ -0.09
HDAC8-213ENST00000436675 ASIC2Q16515 512 aa14.51□□□□□ -0.09
HDAC8-213ENST00000436675 PRAMEF17Q5VTA0 474 aa14.51□□□□□ -0.09
HDAC8-213ENST00000436675 C1QL3Q5VWW1 255 aa14.51□□□□□ -0.09
HDAC8-213ENST00000436675 LRRC49Q8IUZ0 686 aa14.51□□□□□ -0.09
HDAC8-213ENST00000436675 RHOT1Q8IXI2 618 aa14.51□□□□□ -0.09
HDAC8-213ENST00000436675 CISD2Q8N5K1 135 aaKnown RBP14.51□□□□□ -0.09
HDAC8-213ENST00000436675 ENDOVQ8N8Q3 282 aaKnown RBP14.51□□□□□ -0.09
HDAC8-213ENST00000436675 SLC38A9Q8NBW4 561 aa14.51□□□□□ -0.09
HDAC8-213ENST00000436675 SNRNP40Q96DI7 357 aaKnown RBP14.51□□□□□ -0.09
HDAC8-213ENST00000436675 C5orf34Q96MH7 638 aa14.51□□□□□ -0.09
HDAC8-213ENST00000436675 FCRL4Q96PJ5 515 aa14.51□□□□□ -0.09
HDAC8-213ENST00000436675 NUP85Q9BW27 656 aa14.51□□□□□ -0.09
HDAC8-213ENST00000436675 ZFYVE1Q9HBF4 777 aa14.51□□□□□ -0.09
HDAC8-213ENST00000436675 ASF1BQ9NVP2 202 aa14.51□□□□□ -0.09
HDAC8-213ENST00000436675 G3BP2Q9UN86 482 aaKnown RBP14.51□□□□□ -0.09
HDAC8-213ENST00000436675 SNX7Q9UNH6 387 aa14.51□□□□□ -0.09
HDAC8-213ENST00000436675 PSMD13Q9UNM6 376 aa14.51□□□□□ -0.09
HDAC8-213ENST00000436675 CROCCQ5TZA2 2017 aa14.5□□□□□ -0.09
HDAC8-213ENST00000436675 UBA6A0AVT1 1052 aaPredicted RBP14.5□□□□□ -0.09
HDAC8-213ENST00000436675 WIPF3A6NGB9 483 aa14.5□□□□□ -0.09
HDAC8-213ENST00000436675 LRRC53A6NM62 1247 aa14.5□□□□□ -0.09
HDAC8-213ENST00000436675 DDX3XO00571 662 aaKnown RBP eCLIP14.5□□□□□ -0.09
HDAC8-213ENST00000436675 CEACAM4O75871 244 aa14.5□□□□□ -0.09
HDAC8-213ENST00000436675 CDK14O94921 469 aa14.5□□□□□ -0.09
HDAC8-213ENST00000436675 MMP2P08253 660 aa14.5□□□□□ -0.09
HDAC8-213ENST00000436675 LPOP22079 712 aaPredicted RBP14.5□□□□□ -0.09
HDAC8-213ENST00000436675 ITGA1P56199 1179 aa14.5□□□□□ -0.09
HDAC8-213ENST00000436675 PLCL1Q15111 1095 aa14.5□□□□□ -0.09
HDAC8-213ENST00000436675 IFI16Q16666 785 aaKnown RBP14.5□□□□□ -0.09
HDAC8-213ENST00000436675 KYNUQ16719 465 aa14.5□□□□□ -0.09
HDAC8-213ENST00000436675 PLEKHN1Q494U1 663 aaPredicted RBP14.5□□□□□ -0.09
HDAC8-213ENST00000436675 DNTTIP2Q5QJE6 756 aaKnown RBP14.5□□□□□ -0.09
HDAC8-213ENST00000436675 AGAP9Q5VTM2 703 aa14.5□□□□□ -0.09
HDAC8-213ENST00000436675 NCBP2-AS2Q69YL0 99 aa14.5□□□□□ -0.09
HDAC8-213ENST00000436675 TIGD7Q6NT04 549 aaPredicted RBP14.5□□□□□ -0.09
HDAC8-213ENST00000436675 FBXO38Q6PIJ6 1188 aa14.5□□□□□ -0.09
HDAC8-213ENST00000436675 TICAM1Q8IUC6 712 aa14.5□□□□□ -0.09
HDAC8-213ENST00000436675 TRAPPC5Q8IUR0 188 aa14.5□□□□□ -0.09
HDAC8-213ENST00000436675 RBM12BQ8IXT5 1001 aaKnown RBP14.5□□□□□ -0.09
HDAC8-213ENST00000436675 TRAM1L1Q8N609 369 aa14.5□□□□□ -0.09
HDAC8-213ENST00000436675 ADAMTS17Q8TE56 1095 aa14.5□□□□□ -0.09
HDAC8-213ENST00000436675 TEKT4Q8WW24 435 aa14.5□□□□□ -0.09
HDAC8-213ENST00000436675 PNPLA2Q96AD5 504 aa14.5□□□□□ -0.09
HDAC8-213ENST00000436675 PHF12Q96QT6 1004 aa14.5□□□□□ -0.09
HDAC8-213ENST00000436675 ZSCAN5AQ9BUG6 496 aa14.5□□□□□ -0.09
HDAC8-213ENST00000436675 RAB33BQ9H082 229 aa14.5□□□□□ -0.09
HDAC8-213ENST00000436675 MRPL47Q9HD33 250 aaKnown RBP14.5□□□□□ -0.09
HDAC8-213ENST00000436675 SLC5A6Q9Y289 635 aa14.5□□□□□ -0.09
HDAC8-213ENST00000436675 PCDHGB7Q9Y5F8 929 aa14.5□□□□□ -0.09
HDAC8-213ENST00000436675 PCSK5Q92824 1860 aa14.49□□□□□ -0.09
HDAC8-213ENST00000436675 GPR89AB7ZAQ6 455 aa14.49□□□□□ -0.09
HDAC8-213ENST00000436675 CBX6O95503 412 aa14.49□□□□□ -0.09
HDAC8-213ENST00000436675 JCHAINP01591 159 aa14.49□□□□□ -0.09
HDAC8-213ENST00000436675 GPR89BP0CG08 455 aa14.49□□□□□ -0.09
HDAC8-213ENST00000436675 GZMAP12544 262 aa14.49□□□□□ -0.09
HDAC8-213ENST00000436675 SKILP12757 684 aa14.49□□□□□ -0.09
HDAC8-213ENST00000436675 POU3F2P20265 443 aaPredicted RBP14.49□□□□□ -0.09
HDAC8-213ENST00000436675 FECHP22830 423 aa14.49□□□□□ -0.09
HDAC8-213ENST00000436675 CCNCP24863 283 aa14.49□□□□□ -0.09
HDAC8-213ENST00000436675 HNRNPH3P31942 346 aaKnown RBP14.49□□□□□ -0.09
HDAC8-213ENST00000436675 HALP42357 657 aa14.49□□□□□ -0.09
HDAC8-213ENST00000436675 ARCN1P48444 511 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms