RNA–Protein interactions for RNA: ENST00000431373.1

DDR1-236, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 886 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-236ENST00000431373 SNX24Q9Y343 169 aa18.31■□□□□ 0.52
DDR1-236ENST00000431373 DNMT3AQ9Y6K1 912 aaPredicted RBP18.31■□□□□ 0.52
DDR1-236ENST00000431373 ASXL3Q9C0F0 2248 aa18.31■□□□□ 0.52
DDR1-236ENST00000431373 PTPRBP23467 1997 aa18.31■□□□□ 0.52
DDR1-236ENST00000431373 KCNJ13O60928 360 aa18.3■□□□□ 0.52
DDR1-236ENST00000431373 POP7O75817 140 aaKnown RBP18.3■□□□□ 0.52
DDR1-236ENST00000431373 CDK4P11802 303 aa18.3■□□□□ 0.52
DDR1-236ENST00000431373 PAMP19021 973 aa18.3■□□□□ 0.52
DDR1-236ENST00000431373 PPARGP37231 505 aaPredicted RBP18.3■□□□□ 0.52
DDR1-236ENST00000431373 RPL21P46778 160 aaKnown RBP18.3■□□□□ 0.52
DDR1-236ENST00000431373 BCL7AQ4VC05 210 aa18.3■□□□□ 0.52
DDR1-236ENST00000431373 DNAJC21Q5F1R6 531 aaKnown RBP18.3■□□□□ 0.52
DDR1-236ENST00000431373 AARS2Q5JTZ9 985 aaKnown RBP18.3■□□□□ 0.52
DDR1-236ENST00000431373 KIAA0930Q6ICG6 404 aaPredicted RBP18.3■□□□□ 0.52
DDR1-236ENST00000431373 EFL1Q7Z2Z2 1120 aaKnown RBP18.3■□□□□ 0.52
DDR1-236ENST00000431373 SFTPA2Q8IWL1 248 aa18.3■□□□□ 0.52
DDR1-236ENST00000431373 NAGSQ8N159 534 aa18.3■□□□□ 0.52
DDR1-236ENST00000431373 AGGF1Q8N302 714 aaeCLIP18.3■□□□□ 0.52
DDR1-236ENST00000431373 BBOF1Q8ND07 529 aa18.3■□□□□ 0.52
DDR1-236ENST00000431373 OR6C4Q8NGE1 309 aa18.3■□□□□ 0.52
DDR1-236ENST00000431373 IFI44Q8TCB0 444 aa18.3■□□□□ 0.52
DDR1-236ENST00000431373 ADAMTS14Q8WXS8 1223 aa18.3■□□□□ 0.52
DDR1-236ENST00000431373 CCDC97Q96F63 343 aaPredicted RBP18.3■□□□□ 0.52
DDR1-236ENST00000431373 TBC1D29Q9UFV1 150 aa18.3■□□□□ 0.52
DDR1-236ENST00000431373 DNAJC16Q9Y2G8 782 aa18.3■□□□□ 0.52
DDR1-236ENST00000431373 MAD1L1Q9Y6D9 718 aa18.3■□□□□ 0.52
DDR1-236ENST00000431373 SGTAO43765 313 aa18.29■□□□□ 0.52
DDR1-236ENST00000431373 SNX2O60749 519 aa18.29■□□□□ 0.52
DDR1-236ENST00000431373 VAPBO95292 243 aa18.29■□□□□ 0.52
DDR1-236ENST00000431373 GP1BAP07359 652 aa18.29■□□□□ 0.52
DDR1-236ENST00000431373 ADRB1P08588 477 aa18.29■□□□□ 0.52
DDR1-236ENST00000431373 PBLDP30039 288 aaPredicted RBP18.29■□□□□ 0.52
DDR1-236ENST00000431373 PRLHRP49683 370 aa18.29■□□□□ 0.52
DDR1-236ENST00000431373 DHX9Q08211 1270 aaKnown RBP18.29■□□□□ 0.52
DDR1-236ENST00000431373 HLTFQ14527 1009 aaKnown RBP eCLIP18.29■□□□□ 0.52
DDR1-236ENST00000431373 ANKRD20A4Q4UJ75 823 aa18.29■□□□□ 0.52
DDR1-236ENST00000431373 PACS1Q6VY07 963 aa18.29■□□□□ 0.52
DDR1-236ENST00000431373 AMZ2Q86W34 360 aa18.29■□□□□ 0.52
DDR1-236ENST00000431373 C17orf82Q86X59 251 aaPredicted RBP18.29■□□□□ 0.52
DDR1-236ENST00000431373 PDIK1LQ8N165 341 aa18.29■□□□□ 0.52
DDR1-236ENST00000431373 MNS1Q8NEH6 495 aa18.29■□□□□ 0.52
DDR1-236ENST00000431373 NAT14Q8WUY8 206 aa18.29■□□□□ 0.52
DDR1-236ENST00000431373 PATE1Q8WXA2 126 aa18.29■□□□□ 0.52
DDR1-236ENST00000431373 ZNF669Q96BR6 464 aaPredicted RBP18.29■□□□□ 0.52
DDR1-236ENST00000431373 STAMBPL1Q96FJ0 436 aa18.29■□□□□ 0.52
DDR1-236ENST00000431373 TRIM56Q9BRZ2 755 aaKnown RBP18.29■□□□□ 0.52
DDR1-236ENST00000431373 RAB17Q9H0T7 212 aa18.29■□□□□ 0.52
DDR1-236ENST00000431373 DPH5Q9H2P9 285 aa18.29■□□□□ 0.52
DDR1-236ENST00000431373 UTP11Q9Y3A2 253 aaKnown RBP18.29■□□□□ 0.52
DDR1-236ENST00000431373 RPS6KL1Q9Y6S9 549 aa18.29■□□□□ 0.52
DDR1-236ENST00000431373 KLHL33A6NCF5 533 aa18.28■□□□□ 0.52
DDR1-236ENST00000431373 PRR19A6NJB7 356 aa18.28■□□□□ 0.52
DDR1-236ENST00000431373 CD3EAPO15446 510 aaKnown RBP18.28■□□□□ 0.52
DDR1-236ENST00000431373 AP2A2O94973 939 aa18.28■□□□□ 0.52
DDR1-236ENST00000431373 EML2O95834 649 aa18.28■□□□□ 0.52
DDR1-236ENST00000431373 F3P13726 295 aa18.28■□□□□ 0.52
DDR1-236ENST00000431373 SLC2A4P14672 509 aa18.28■□□□□ 0.52
DDR1-236ENST00000431373 ARNTP27540 789 aa18.28■□□□□ 0.52
DDR1-236ENST00000431373 NSG1P42857 185 aa18.28■□□□□ 0.52
DDR1-236ENST00000431373 MAZP56270 477 aaKnown RBP18.28■□□□□ 0.52
DDR1-236ENST00000431373 DMPKQ09013 629 aa18.28■□□□□ 0.52
DDR1-236ENST00000431373 CALCOCO2Q13137 446 aa18.28■□□□□ 0.52
DDR1-236ENST00000431373 SEMA3AQ14563 771 aa18.28■□□□□ 0.52
DDR1-236ENST00000431373 BBS9Q3SYG4 887 aa18.28■□□□□ 0.52
DDR1-236ENST00000431373 MSS51Q4VC12 460 aa18.28■□□□□ 0.52
DDR1-236ENST00000431373 PERM1Q5SV97 790 aa18.28■□□□□ 0.52
DDR1-236ENST00000431373 DUPD1Q68J44 220 aa18.28■□□□□ 0.52
DDR1-236ENST00000431373 C8orf74Q6P047 294 aa18.28■□□□□ 0.52
DDR1-236ENST00000431373 DHRS13Q6UX07 377 aa18.28■□□□□ 0.52
DDR1-236ENST00000431373 RAB44Q7Z6P3 723 aaPredicted RBP18.28■□□□□ 0.52
DDR1-236ENST00000431373 TMEM135Q86UB9 458 aa18.28■□□□□ 0.52
DDR1-236ENST00000431373 BEND7Q8N7W2 519 aaPredicted RBP18.28■□□□□ 0.52
DDR1-236ENST00000431373 LINC00615Q96LM1 132 aaPredicted RBP18.28■□□□□ 0.52
DDR1-236ENST00000431373 FCRL3Q96P31 734 aaPredicted RBP18.28■□□□□ 0.52
DDR1-236ENST00000431373 WHRNQ9P202 907 aa18.28■□□□□ 0.52
DDR1-236ENST00000431373 MARCH4Q9P2E8 410 aaPredicted RBP18.28■□□□□ 0.52
DDR1-236ENST00000431373 A6NCN8 305 aa18.27■□□□□ 0.52
DDR1-236ENST00000431373 QSOX1O00391 747 aa18.27■□□□□ 0.52
DDR1-236ENST00000431373 TP73O15350 636 aa18.27■□□□□ 0.52
DDR1-236ENST00000431373 BANF1O75531 89 aa18.27■□□□□ 0.52
DDR1-236ENST00000431373 USP1O94782 785 aa18.27■□□□□ 0.52
DDR1-236ENST00000431373 POLBP06746 335 aa18.27■□□□□ 0.52
DDR1-236ENST00000431373 GLB1P16278 677 aa18.27■□□□□ 0.52
DDR1-236ENST00000431373 IDSP22304 550 aa18.27■□□□□ 0.52
DDR1-236ENST00000431373 TTPAP49638 278 aa18.27■□□□□ 0.52
DDR1-236ENST00000431373 ARL4CP56559 192 aa18.27■□□□□ 0.52
DDR1-236ENST00000431373 E2F1Q01094 437 aa18.27■□□□□ 0.52
DDR1-236ENST00000431373 FOXC1Q12948 553 aa18.27■□□□□ 0.52
DDR1-236ENST00000431373 HIF1AQ16665 826 aa18.27■□□□□ 0.52
DDR1-236ENST00000431373 IYDQ6PHW0 289 aa18.27■□□□□ 0.52
DDR1-236ENST00000431373 SFRP1Q8N474 314 aa18.27■□□□□ 0.52
DDR1-236ENST00000431373 ARL14Q8N4G2 192 aa18.27■□□□□ 0.52
DDR1-236ENST00000431373 CLDN19Q8N6F1 224 aa18.27■□□□□ 0.52
DDR1-236ENST00000431373 OTUD6BQ8N6M0 293 aa18.27■□□□□ 0.52
DDR1-236ENST00000431373 OR2L2Q8NH16 312 aa18.27■□□□□ 0.52
DDR1-236ENST00000431373 MAPK15Q8TD08 544 aa18.27■□□□□ 0.52
DDR1-236ENST00000431373 CCDC74AQ96AQ1 378 aa18.27■□□□□ 0.52
DDR1-236ENST00000431373 PWWP2AQ96N64 755 aa18.27■□□□□ 0.52
DDR1-236ENST00000431373 EBNA1BP2Q99848 306 aaKnown RBP18.27■□□□□ 0.52
DDR1-236ENST00000431373 NAT9Q9BTE0 207 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms