RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 UQCRBP14927 111 aa13.78□□□□□ -0.2
HOXC4-202ENST00000430889 ITGALP20701 1170 aa13.78□□□□□ -0.2
HOXC4-202ENST00000430889 HLA-FP30511 346 aa13.78□□□□□ -0.2
HOXC4-202ENST00000430889 ERVPABLB-1P60509 514 aa13.78□□□□□ -0.2
HOXC4-202ENST00000430889 CHRNA6Q15825 494 aa13.78□□□□□ -0.2
HOXC4-202ENST00000430889 FUT11Q495W5 492 aa13.78□□□□□ -0.2
HOXC4-202ENST00000430889 GPR33Q49SQ1 333 aa13.78□□□□□ -0.2
HOXC4-202ENST00000430889 SAMD4BQ5PRF9 694 aaKnown RBP13.78□□□□□ -0.2
HOXC4-202ENST00000430889 GPRC6AQ5T6X5 926 aa13.78□□□□□ -0.2
HOXC4-202ENST00000430889 ASTLQ6HA08 431 aaPredicted RBP13.78□□□□□ -0.2
HOXC4-202ENST00000430889 LETMD1Q6P1Q0 360 aa13.78□□□□□ -0.2
HOXC4-202ENST00000430889 TMEM154Q6P9G4 183 aa13.78□□□□□ -0.2
HOXC4-202ENST00000430889 BLOC1S3Q6QNY0 202 aa13.78□□□□□ -0.2
HOXC4-202ENST00000430889 GPRIN3Q6ZVF9 776 aa13.78□□□□□ -0.2
HOXC4-202ENST00000430889 TSPAN33Q86UF1 283 aa13.78□□□□□ -0.2
HOXC4-202ENST00000430889 MINDY1Q8N5J2 469 aa13.78□□□□□ -0.2
HOXC4-202ENST00000430889 KREMEN2Q8NCW0 462 aa13.78□□□□□ -0.2
HOXC4-202ENST00000430889 TUBGCP3Q96CW5 907 aa13.78□□□□□ -0.2
HOXC4-202ENST00000430889 MCCC1Q96RQ3 725 aaPredicted RBP13.78□□□□□ -0.2
HOXC4-202ENST00000430889 TUBGCP5Q96RT8 1024 aa13.78□□□□□ -0.2
HOXC4-202ENST00000430889 CIPCQ9C0C6 399 aa13.78□□□□□ -0.2
HOXC4-202ENST00000430889 CLPBQ9H078 707 aa13.78□□□□□ -0.2
HOXC4-202ENST00000430889 TMEM45AQ9NWC5 275 aa13.78□□□□□ -0.2
HOXC4-202ENST00000430889 GEMIN8Q9NWZ8 242 aaKnown RBP13.78□□□□□ -0.2
HOXC4-202ENST00000430889 CD274Q9NZQ7 290 aa13.78□□□□□ -0.2
HOXC4-202ENST00000430889 PCDH10Q9P2E7 1040 aa13.78□□□□□ -0.2
HOXC4-202ENST00000430889 PTBP2Q9UKA9 531 aaKnown RBP13.78□□□□□ -0.2
HOXC4-202ENST00000430889 IRAK3Q9Y616 596 aa13.78□□□□□ -0.2
HOXC4-202ENST00000430889 PLXNA2O75051 1894 aa13.77□□□□□ -0.2
HOXC4-202ENST00000430889 GLYATL1P3A0A0U1RQE8 302 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 ASPDHA6ND91 283 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 NR5A2O00482 541 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 OR7A17O14581 309 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 SNX2O60749 519 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 RNASEH1O60930 286 aaKnown RBP13.77□□□□□ -0.21
HOXC4-202ENST00000430889 SERPINA4P29622 427 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 SPAM1P38567 509 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 STK19P49842 368 aaPredicted RBP13.77□□□□□ -0.21
HOXC4-202ENST00000430889 DIO3P55073 304 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 RALGDSQ12967 914 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 RCAN2Q14206 197 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 GEN1Q17RS7 908 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 KIF19Q2TAC6 998 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 GRAMD4Q6IC98 578 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 C22orf39Q6P5X5 142 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 CRTC1Q6UUV9 634 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 CMTM8Q8IZV2 173 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 NXPE1Q8N323 547 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 CHCHD4Q8N4Q1 142 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 KLHL23Q8NBE8 558 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 PCYOX1LQ8NBM8 494 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 OR52B6Q8NGF0 335 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 MICAL1Q8TDZ2 1067 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 SLC22A17Q8WUG5 538 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 UBTD2Q8WUN7 234 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 ESAMQ96AP7 390 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 LRCH3Q96II8 777 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 UHRF1Q96T88 793 aaPredicted RBP13.77□□□□□ -0.21
HOXC4-202ENST00000430889 CCT7Q99832 543 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 PKP2Q99959 881 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 C17orf80Q9BSJ5 609 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 CPEB1Q9BZB8 566 aaKnown RBP13.77□□□□□ -0.21
HOXC4-202ENST00000430889 C11orf49Q9H6J7 331 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 ASB8Q9H765 288 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 SARS2Q9NP81 518 aaKnown RBP13.77□□□□□ -0.21
HOXC4-202ENST00000430889 CCL26Q9Y258 94 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 OARD1Q9Y530 152 aa13.77□□□□□ -0.21
HOXC4-202ENST00000430889 GOLGA8CPA6NN73 597 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 NME4O00746 187 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 TAPBPO15533 448 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 RNASEH2AO75792 299 aaKnown RBP13.76□□□□□ -0.21
HOXC4-202ENST00000430889 OR4F21O95013 312 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 CXCL14O95715 111 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 CYBBP04839 570 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 ADH1AP07327 375 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 LYNP07948 512 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 UGT1A6P19224 532 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 UGT1A1P22309 533 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 UGT1A4P22310 534 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 UGT1A3P35503 534 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 UGT1A5P35504 534 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 GJA8P48165 433 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 SLC7A2P52569 658 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 SNRPD1P62314 119 aaKnown RBP13.76□□□□□ -0.21
HOXC4-202ENST00000430889 RHDQ02161 417 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 FOXM1Q08050 763 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 TRAF3Q13114 568 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 LRRC36Q1X8D7 754 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 MYLK3Q32MK0 819 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 C18orf21Q32NC0 220 aaPredicted RBP13.76□□□□□ -0.21
HOXC4-202ENST00000430889 PDCD4Q53EL6 469 aaKnown RBP13.76□□□□□ -0.21
HOXC4-202ENST00000430889 PTRHD1Q6GMV3 140 aaKnown RBP13.76□□□□□ -0.21
HOXC4-202ENST00000430889 PRMT9Q6P2P2 845 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 RNF165Q6ZSG1 346 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 Q6ZSR9 355 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 TPRG1Q6ZUI0 275 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 GOLGA7Q7Z5G4 137 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 APLFQ8IW19 511 aaPredicted RBP13.76□□□□□ -0.21
HOXC4-202ENST00000430889 GPR26Q8NDV2 337 aa13.76□□□□□ -0.21
HOXC4-202ENST00000430889 ADCY4Q8NFM4 1077 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms