RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 F8A1P23610 371 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 PSMA2P25787 234 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 PTPN4P29074 926 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 GPC1P35052 558 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 SERPINB6P35237 376 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 MMP13P45452 471 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 MAP2K3P46734 347 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 ZNF135P52742 658 aaPredicted RBP7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 SEPT7Q16181 437 aaKnown RBP7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 RALGPS1Q5JS13 557 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 ZNF569Q5MCW4 686 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 TBCELQ5QJ74 424 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 TMTC4Q5T4D3 741 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 MARC1Q5VT66 337 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 KLHDC7AQ5VTJ3 777 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 CPZQ66K79 652 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 LRRC66Q68CR7 880 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 ARMC6Q6NXE6 501 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 PPP1R2P3Q6NXS1 205 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 IYDQ6PHW0 289 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 WDR59Q6PJI9 974 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 FAM92BQ6ZTR7 304 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 RFX8Q6ZV50 586 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 ZNF765Q7L2R6 523 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 ZC3H18Q86VM9 953 aaKnown RBP7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 TICAM1Q8IUC6 712 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 PELI3Q8N2H9 469 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 SLC20A1Q8WUM9 679 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 CENPIQ92674 756 aaPredicted RBP7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 PNPLA2Q96AD5 504 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 SCRN2Q96FV2 425 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 SGSM3Q96HU1 749 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 NUDCD1Q96RS6 583 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 TRIM55Q9BYV6 548 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 BRD8Q9H0E9 1235 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 VPS16Q9H269 839 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 ZNF768Q9H5H4 540 aaKnown RBP7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 GPATCH2LQ9NWQ4 482 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 SOHLH2Q9NX45 425 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 SIDT1Q9NXL6 827 aaKnown RBP7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 TBC1D29Q9UFV1 150 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 PADI2Q9Y2J8 665 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 HRH3Q9Y5N1 445 aa7.73□□□□□ -1.17
ECHDC1-207ENST00000430841 NBPF19A0A087WUL8 3843 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 SSU72P8A0A1W2PR75 194 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 UBA6A0AVT1 1052 aaPredicted RBP7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 SIGLEC16A6NMB1 481 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 C9J4A7 227 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 TRAFD1O14545 582 aaPredicted RBP7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 ZNF185O15231 689 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 GRID2O43424 1007 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 PGLSO95336 258 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 CLDN1O95832 211 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 ATP1A1P05023 1023 aaKnown RBP7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 CCDC172P0C7W6 258 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 ERCC2P18074 760 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 LHCGRP22888 699 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 SOX5P35711 763 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 CAPZBP47756 277 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 CDH6P55285 790 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 GSDMDP57764 484 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 RPS18P62269 152 aaKnown RBP7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 GTF2H3Q13889 308 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 PRR30Q53SZ7 412 aaPredicted RBP7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 HSP90AA4PQ58FG1 418 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 NKAPLQ5M9Q1 402 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 IRAK1BP1Q5VVH5 260 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 SLC6A19Q695T7 634 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 CRTC3Q6UUV7 619 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 TMCO3Q6UWJ1 677 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 TMEM26Q6ZUK4 368 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 PRSS42Q7Z5A4 293 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 TSPAN33Q86UF1 283 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 RAB43Q86YS6 212 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 RBM12BQ8IXT5 1001 aaKnown RBP7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 MLKLQ8NB16 471 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 CLEC1AQ8NC01 280 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 ANKRD20A12PQ8NF67 263 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 CPLX3Q8WVH0 158 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 RIOK2Q9BVS4 552 aaKnown RBP7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 MAGEB5Q9BZ81 275 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 SPRY4Q9C004 299 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 ABCG8Q9H221 673 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 UCK1Q9HA47 277 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 WASH6PQ9NQA3 447 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 RAB6BQ9NRW1 208 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 KLC4Q9NSK0 619 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 POT1Q9NUX5 634 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 TMEM63CQ9P1W3 806 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 ERRFI1Q9UJM3 462 aaPredicted RBP7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 FARSAQ9Y285 508 aaKnown RBP7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 ZDHHC9Q9Y397 364 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 POLQO75417 2590 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 HIVEP3Q5T1R4 2406 aa7.72□□□□□ -1.17
ECHDC1-207ENST00000430841 C1orf232A0A0U1RR37 186 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 F5H423 210 aaPredicted RBP7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 MEN1O00255 615 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 HTRA2O43464 458 aaPredicted RBP7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 SCRG1O75711 98 aa7.71□□□□□ -1.18
ECHDC1-207ENST00000430841 IPO13O94829 963 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms