RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 RINLQ6ZS11 566 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 ZNF641Q96N77 438 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-208ENST00000430669 RBM4BQ9BQ04 359 aaKnown RBP11.42□□□□□ -0.58
PTCH1-208ENST00000430669 RBM4Q9BWF3 364 aaKnown RBP11.42□□□□□ -0.58
PTCH1-208ENST00000430669 USE1Q9NZ43 259 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 TCRBV7S3A2A0A539 114 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 TMEM189-UBE2V1I3L0A0 370 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 FAM20BO75063 409 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 STBD1O95210 358 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 DAB2P98082 770 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 RBM15BQ8NDT2 890 aaKnown RBP11.42□□□□□ -0.58
PTCH1-208ENST00000430669 NOL11Q9H8H0 719 aaKnown RBP11.42□□□□□ -0.58
PTCH1-208ENST00000430669 DUSP12Q9UNI6 340 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 ITM2BQ9Y287 266 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 CCDC162PA2VCL2 907 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 H3BNX3 289 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 IQCF3P0C7M6 154 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 ZNF605Q86T29 641 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 CROCCP3Q8IVE0 287 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 ADCY4Q8NFM4 1077 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 PPCDCQ96CD2 204 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 SUV39H2Q9H5I1 410 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 CCDC177Q9NQR7 707 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-208ENST00000430669 ARL8BQ9NVJ2 186 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 PSMD8P48556 350 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 DGKGP49619 791 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 ST13P50502 369 aaKnown RBP11.42□□□□□ -0.58
PTCH1-208ENST00000430669 AP1S2P56377 157 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 CPSF6Q16630 551 aaKnown RBP eCLIP11.42□□□□□ -0.58
PTCH1-208ENST00000430669 MED27Q6P2C8 311 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 UBR7Q8N806 425 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 TRIB2Q92519 343 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 TEFMQ96QE5 360 aaKnown RBP11.42□□□□□ -0.58
PTCH1-208ENST00000430669 LTBP1Q14766 1721 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 GNAZP19086 355 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 SLC11A1P49279 550 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 TLE2Q04725 743 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 LINGO4Q6UY18 593 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 DNAJC14Q6Y2X3 702 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-208ENST00000430669 AARSD1Q9BTE6 412 aaKnown RBP11.42□□□□□ -0.58
PTCH1-208ENST00000430669 TNKS2Q9H2K2 1166 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 CCSER2Q9H7U1 834 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 PCDH12Q9NPG4 1184 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 GULP1Q9UBP9 304 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 PNMA8CA0A1B0GUJ8 204 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 LCHNA4D1U4 455 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 MAGEA10P43363 369 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-208ENST00000430669 KIR3DL1P43629 444 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 REP15Q6BDI9 236 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 EIF3MQ7L2H7 374 aaKnown RBP11.42□□□□□ -0.58
PTCH1-208ENST00000430669 TMPRSS11BQ86T26 416 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 GALNT13Q8IUC8 556 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 PHF10Q8WUB8 498 aaKnown RBP11.42□□□□□ -0.58
PTCH1-208ENST00000430669 TTLL2Q9BWV7 592 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 ITM2CQ9NQX7 267 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 ARHGEF3Q9NR81 526 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 DZANK1Q9NVP4 752 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 TULP2O00295 520 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 FFAR2O15552 330 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 TRBC1P01850 177 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 EPORP19235 508 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-208ENST00000430669 RBM23Q86U06 439 aaKnown RBP11.42□□□□□ -0.58
PTCH1-208ENST00000430669 C1orf50Q9BV19 199 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 ALG2Q9H553 416 aa11.42□□□□□ -0.58
PTCH1-208ENST00000430669 EIF4E1BA6NMX2 242 aaKnown RBP11.41□□□□□ -0.58
PTCH1-208ENST00000430669 ALG11Q2TAA5 492 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 ATP13A5Q4VNC0 1218 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 HFE2Q6ZVN8 426 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 SCML4Q8N228 414 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 AVL9Q8NBF6 648 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 LRIG1Q96JA1 1093 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 NLE1Q9NVX2 485 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-208ENST00000430669 FCF1Q9Y324 198 aaKnown RBP11.41□□□□□ -0.58
PTCH1-208ENST00000430669 PCDHGA11Q9Y5H2 935 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 CASP8AP2Q9UKL3 1982 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 SUV39H1O43463 412 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 BCL10O95999 233 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 SERPINB1P30740 379 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 SLC7A2P52569 658 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 SP140Q13342 867 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 TEAD4Q15561 434 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 MYDGFQ969H8 173 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 NPAS2Q99743 824 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 SUFUQ9UMX1 484 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 ZBTB42B2RXF5 422 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 VAV1P15498 845 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 FOXM1Q08050 763 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 STEAP4Q687X5 459 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 UMODL1-AS1Q8N2C9 162 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 WDR90Q96KV7 1748 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 CLN6Q9NWW5 311 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 RNF186Q9NXI6 227 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 ZSWIM8A7E2V4 1837 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 FPGTO14772 594 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 CST1P01037 141 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 RB1P06400 928 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 ERVK-8P63133 956 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 KCNC3Q14003 757 aa11.41□□□□□ -0.58
PTCH1-208ENST00000430669 POM121L1PQ3SYA9 428 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms