RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 GALCP54803 685 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 MRPS34P82930 218 aaKnown RBP4.13□□□□□ -1.75
HMGB3-203ENST00000430118 TFF2Q03403 129 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 EFEMP1Q12805 493 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 ALCAMQ13740 583 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 PKP1Q13835 747 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 RUNX2Q13950 521 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 GRB14Q14449 540 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 CCL14Q16627 93 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 LSM12Q3MHD2 195 aaKnown RBP4.13□□□□□ -1.75
HMGB3-203ENST00000430118 SYTL3Q4VX76 610 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 ZNF628Q5EBL2 1059 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 EPHA10Q5JZY3 1008 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 FNDC7Q5VTL7 733 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 CST9LP1Q5W188 147 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 CDC42EP5Q6NZY7 148 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 CRELD2Q6UXH1 353 aaPredicted RBP4.13□□□□□ -1.75
HMGB3-203ENST00000430118 DENND5BQ6ZUT9 1274 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 ZNF771Q7L3S4 317 aaPredicted RBP4.13□□□□□ -1.75
HMGB3-203ENST00000430118 HIST3H2AQ7L7L0 130 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 LINGO2Q7L985 606 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 CCDC25Q86WR0 208 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 ZCCHC9Q8N567 271 aaKnown RBP4.13□□□□□ -1.75
HMGB3-203ENST00000430118 DPP10Q8N608 796 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 MCUQ8NE86 351 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 BEST2Q8NFU1 509 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 DNAAF4Q8WXU2 420 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 SARAFQ96BY9 339 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 PABPC5Q96DU9 382 aaKnown RBP4.13□□□□□ -1.75
HMGB3-203ENST00000430118 ELMOD3Q96FG2 381 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 GLT1D1Q96MS3 346 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 SPAG5Q96R06 1193 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 ABHD1Q96SE0 405 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 MXRA8Q9BRK3 442 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 HGH1Q9BTY7 390 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 KLHL4Q9C0H6 718 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 CDT1Q9H211 546 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 WDR6Q9NNW5 1121 aaKnown RBP4.13□□□□□ -1.75
HMGB3-203ENST00000430118 BPIFA1Q9NP55 256 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 DECR2Q9NUI1 292 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 SETD4Q9NVD3 440 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 ARHGEF38Q9NXL2 777 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 ANKRD10Q9NXR5 420 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 C5AR2Q9P296 337 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 IL17BQ9UHF5 180 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 GTF3C4Q9UKN8 822 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 PTRH2Q9Y3E5 179 aaKnown RBP4.13□□□□□ -1.75
HMGB3-203ENST00000430118 WNT6Q9Y6F9 365 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 FLT1P17948 1338 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 MYH13Q9UKX3 1938 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 DNAH12Q6ZR08 3092 aa4.13□□□□□ -1.75
HMGB3-203ENST00000430118 ZNF236Q9UL36 1845 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 CYP2D7A0A087X1C5 515 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 LOC102723996A0A087X1L8 192 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 BICDL2A1A5D9 508 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 TYW5A2RUC4 315 aaKnown RBP4.12□□□□□ -1.75
HMGB3-203ENST00000430118 HSPB2A8KAH6 182 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 KLRF2D3W0D1 207 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 WDR46O15213 610 aaKnown RBP4.12□□□□□ -1.75
HMGB3-203ENST00000430118 DCXO43602 365 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 JRKO75564 520 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 MTA2O94776 668 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 NKX2-2O95096 273 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 TUBBP07437 444 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 MMP2P08253 660 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 CYP2A6P11509 494 aaPredicted RBP4.12□□□□□ -1.75
HMGB3-203ENST00000430118 SRD5A1P18405 259 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 CD58P19256 250 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 GPD1P21695 349 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 ITGB8P26012 769 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 KLRC2P26717 231 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 ACADLP28330 430 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 SHMT1P34896 483 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 BACE1P56817 501 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 GSCP56915 257 aaPredicted RBP4.12□□□□□ -1.75
HMGB3-203ENST00000430118 TAS2R40P59535 323 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 HSPB2Q16082 182 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 TSTD2Q5T7W7 516 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 TTLL10Q6ZVT0 673 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 ANKRD33Q7Z3H0 272 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 CCDC91Q7Z6B0 441 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 TRIM74Q86UV6 250 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 TRIM73Q86UV7 250 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 METTL23Q86XA0 190 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 ARID3BQ8IVW6 561 aaPredicted RBP4.12□□□□□ -1.75
HMGB3-203ENST00000430118 DENND6AQ8IWF6 608 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 WDR63Q8IWG1 891 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 OR8H3Q8N146 312 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 GUF1Q8N442 669 aaKnown RBP4.12□□□□□ -1.75
HMGB3-203ENST00000430118 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.12□□□□□ -1.75
HMGB3-203ENST00000430118 BICD2Q8TD16 824 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 PTPMT1Q8WUK0 201 aaPredicted RBP4.12□□□□□ -1.75
HMGB3-203ENST00000430118 DEPDC1BQ8WUY9 529 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 KAT2AQ92830 837 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 VPS33AQ96AX1 596 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 ZC3HAV1LQ96H79 300 aaKnown RBP4.12□□□□□ -1.75
HMGB3-203ENST00000430118 SLC41A2Q96JW4 573 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 PIMREGQ9BSJ6 248 aa4.12□□□□□ -1.75
HMGB3-203ENST00000430118 IFIH1Q9BYX4 1025 aaKnown RBP4.12□□□□□ -1.75
HMGB3-203ENST00000430118 UPF3BQ9BZI7 483 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms