RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 FAM199XQ6PEV8 388 aaPredicted RBP17.97■□□□□ 0.47
UPK3BP1-201ENST00000428678 ZNF547Q8IVP9 402 aa17.97■□□□□ 0.47
UPK3BP1-201ENST00000428678 THAP4Q8WY91 577 aa17.97■□□□□ 0.47
UPK3BP1-201ENST00000428678 ZNF670Q9BS34 389 aa17.97■□□□□ 0.47
UPK3BP1-201ENST00000428678 GPR87Q9BY21 358 aa17.97■□□□□ 0.47
UPK3BP1-201ENST00000428678 GPR63Q9BZJ6 419 aa17.97■□□□□ 0.47
UPK3BP1-201ENST00000428678 AKIRIN1Q9H9L7 192 aaPredicted RBP17.97■□□□□ 0.47
UPK3BP1-201ENST00000428678 IGHV5-51A0A0C4DH38 117 aa17.96■□□□□ 0.47
UPK3BP1-201ENST00000428678 A1L4Q6 167 aa17.96■□□□□ 0.47
UPK3BP1-201ENST00000428678 ARGFXA6NJG6 315 aa17.96■□□□□ 0.47
UPK3BP1-201ENST00000428678 SEMA7AO75326 666 aa17.96■□□□□ 0.47
UPK3BP1-201ENST00000428678 VCLP18206 1134 aa17.96■□□□□ 0.47
UPK3BP1-201ENST00000428678 PTPN4P29074 926 aa17.96■□□□□ 0.47
UPK3BP1-201ENST00000428678 CCL11P51671 97 aa17.96■□□□□ 0.47
UPK3BP1-201ENST00000428678 RPS15P62841 145 aaKnown RBP17.96■□□□□ 0.47
UPK3BP1-201ENST00000428678 KHDC1Q4VXA5 237 aaKnown RBP17.96■□□□□ 0.47
UPK3BP1-201ENST00000428678 WASH2PQ6VEQ5 465 aa17.96■□□□□ 0.47
UPK3BP1-201ENST00000428678 TRAPPC5Q8IUR0 188 aa17.96■□□□□ 0.47
UPK3BP1-201ENST00000428678 UBXN4Q92575 508 aa17.96■□□□□ 0.47
UPK3BP1-201ENST00000428678 HDAC11Q96DB2 347 aa17.96■□□□□ 0.47
UPK3BP1-201ENST00000428678 SLC41A2Q96JW4 573 aa17.96■□□□□ 0.47
UPK3BP1-201ENST00000428678 ZNF830Q96NB3 372 aaPredicted RBP17.96■□□□□ 0.47
UPK3BP1-201ENST00000428678 RAB33BQ9H082 229 aa17.96■□□□□ 0.47
UPK3BP1-201ENST00000428678 WASH6PQ9NQA3 447 aa17.96■□□□□ 0.47
UPK3BP1-201ENST00000428678 ACSS2Q9NR19 701 aa17.96■□□□□ 0.47
UPK3BP1-201ENST00000428678 NFKBIL1Q9UBC1 381 aaPredicted RBP17.96■□□□□ 0.47
UPK3BP1-201ENST00000428678 ZNF711Q9Y462 761 aa17.96■□□□□ 0.47
UPK3BP1-201ENST00000428678 TEP1Q99973 2627 aaKnown RBP17.95■□□□□ 0.46
UPK3BP1-201ENST00000428678 CYP1A2P05177 515 aa17.95■□□□□ 0.46
UPK3BP1-201ENST00000428678 EBLN1P0CF75 366 aa17.95■□□□□ 0.46
UPK3BP1-201ENST00000428678 RNF224P0DH78 156 aa17.95■□□□□ 0.46
UPK3BP1-201ENST00000428678 HALP42357 657 aa17.95■□□□□ 0.46
UPK3BP1-201ENST00000428678 ARL4DP49703 201 aa17.95■□□□□ 0.46
UPK3BP1-201ENST00000428678 ACY1Q03154 408 aa17.95■□□□□ 0.46
UPK3BP1-201ENST00000428678 SLC10A2Q12908 348 aaPredicted RBP17.95■□□□□ 0.46
UPK3BP1-201ENST00000428678 ZBTB17Q13105 803 aa17.95■□□□□ 0.46
UPK3BP1-201ENST00000428678 IL10RAQ13651 578 aa17.95■□□□□ 0.46
UPK3BP1-201ENST00000428678 PDK2Q15119 407 aa17.95■□□□□ 0.46
UPK3BP1-201ENST00000428678 TMC3Q7Z5M5 1100 aa17.95■□□□□ 0.46
UPK3BP1-201ENST00000428678 SYVN1Q86TM6 617 aa17.95■□□□□ 0.46
UPK3BP1-201ENST00000428678 CPNE8Q86YQ8 564 aa17.95■□□□□ 0.46
UPK3BP1-201ENST00000428678 MAP7D3Q8IWC1 876 aa17.95■□□□□ 0.46
UPK3BP1-201ENST00000428678 PQLC3Q8N755 202 aa17.95■□□□□ 0.46
UPK3BP1-201ENST00000428678 CNTD1Q8N815 330 aa17.95■□□□□ 0.46
UPK3BP1-201ENST00000428678 FCRL4Q96PJ5 515 aa17.95■□□□□ 0.46
UPK3BP1-201ENST00000428678 TRIB3Q96RU7 358 aa17.95■□□□□ 0.46
UPK3BP1-201ENST00000428678 ING2Q9H160 280 aa17.95■□□□□ 0.46
UPK3BP1-201ENST00000428678 MAGEE1Q9HCI5 957 aa17.95■□□□□ 0.46
UPK3BP1-201ENST00000428678 FGF21Q9NSA1 209 aa17.95■□□□□ 0.46
UPK3BP1-201ENST00000428678 WDR37Q9Y2I8 494 aa17.95■□□□□ 0.46
UPK3BP1-201ENST00000428678 MAP4K5Q9Y4K4 846 aa17.95■□□□□ 0.46
UPK3BP1-201ENST00000428678 PCDHGA9Q9Y5G4 932 aaKnown RBP17.95■□□□□ 0.46
UPK3BP1-201ENST00000428678 SPTBP11277 2137 aa17.94■□□□□ 0.46
UPK3BP1-201ENST00000428678 BPIP17213 487 aa17.94■□□□□ 0.46
UPK3BP1-201ENST00000428678 PDE1BQ01064 536 aa17.94■□□□□ 0.46
UPK3BP1-201ENST00000428678 GTF2H3Q13889 308 aa17.94■□□□□ 0.46
UPK3BP1-201ENST00000428678 PCSK7Q16549 785 aa17.94■□□□□ 0.46
UPK3BP1-201ENST00000428678 FAM182AQ5T1J6 154 aa17.94■□□□□ 0.46
UPK3BP1-201ENST00000428678 ZFYVE27Q5T4F4 411 aa17.94■□□□□ 0.46
UPK3BP1-201ENST00000428678 KLHL35Q6PF15 583 aa17.94■□□□□ 0.46
UPK3BP1-201ENST00000428678 GDAP1Q8TB36 358 aa17.94■□□□□ 0.46
UPK3BP1-201ENST00000428678 ZNF514Q96K75 400 aaPredicted RBP17.94■□□□□ 0.46
UPK3BP1-201ENST00000428678 CEP41Q9BYV8 373 aa17.94■□□□□ 0.46
UPK3BP1-201ENST00000428678 CASS4Q9NQ75 786 aa17.94■□□□□ 0.46
UPK3BP1-201ENST00000428678 SEMA5BQ9P283 1151 aa17.94■□□□□ 0.46
UPK3BP1-201ENST00000428678 FARSAQ9Y285 508 aaKnown RBP17.94■□□□□ 0.46
UPK3BP1-201ENST00000428678 ABCA12Q86UK0 2595 aa17.94■□□□□ 0.46
UPK3BP1-201ENST00000428678 SORBS2O94875 1100 aaKnown RBP17.93■□□□□ 0.46
UPK3BP1-201ENST00000428678 FECHP22830 423 aa17.93■□□□□ 0.46
UPK3BP1-201ENST00000428678 IFI35P80217 286 aaPredicted RBP17.93■□□□□ 0.46
UPK3BP1-201ENST00000428678 TYRO3Q06418 890 aa17.93■□□□□ 0.46
UPK3BP1-201ENST00000428678 PLCL1Q15111 1095 aa17.93■□□□□ 0.46
UPK3BP1-201ENST00000428678 DNTTIP2Q5QJE6 756 aaKnown RBP17.93■□□□□ 0.46
UPK3BP1-201ENST00000428678 HGSNATQ68CP4 663 aa17.93■□□□□ 0.46
UPK3BP1-201ENST00000428678 CERS6Q6ZMG9 384 aa17.93■□□□□ 0.46
UPK3BP1-201ENST00000428678 C11orf96Q7Z7L8 435 aa17.93■□□□□ 0.46
UPK3BP1-201ENST00000428678 BPHLQ86WA6 291 aaPredicted RBP17.93■□□□□ 0.46
UPK3BP1-201ENST00000428678 TTC30BQ8N4P2 665 aa17.93■□□□□ 0.46
UPK3BP1-201ENST00000428678 GPR150Q8NGU9 434 aa17.93■□□□□ 0.46
UPK3BP1-201ENST00000428678 MR1Q95460 341 aa17.93■□□□□ 0.46
UPK3BP1-201ENST00000428678 FAF2Q96CS3 445 aa17.93■□□□□ 0.46
UPK3BP1-201ENST00000428678 TTC25Q96NG3 672 aa17.93■□□□□ 0.46
UPK3BP1-201ENST00000428678 MAP3K3Q99759 626 aa17.93■□□□□ 0.46
UPK3BP1-201ENST00000428678 NAT10Q9H0A0 1025 aaKnown RBP17.93■□□□□ 0.46
UPK3BP1-201ENST00000428678 MLXIPLQ9NP71 852 aa17.93■□□□□ 0.46
UPK3BP1-201ENST00000428678 CUEDC1Q9NWM3 386 aaPredicted RBP17.93■□□□□ 0.46
UPK3BP1-201ENST00000428678 LUZP4Q9P127 313 aa17.93■□□□□ 0.46
UPK3BP1-201ENST00000428678 MAP10Q9P2G4 905 aa17.93■□□□□ 0.46
UPK3BP1-201ENST00000428678 TMPRSS11EQ9UL52 423 aa17.93■□□□□ 0.46
UPK3BP1-201ENST00000428678 CPNE3O75131 537 aaKnown RBP17.92■□□□□ 0.46
UPK3BP1-201ENST00000428678 PTGIRP43119 386 aa17.92■□□□□ 0.46
UPK3BP1-201ENST00000428678 CDK18Q07002 472 aa17.92■□□□□ 0.46
UPK3BP1-201ENST00000428678 PPIDQ08752 370 aaKnown RBP17.92■□□□□ 0.46
UPK3BP1-201ENST00000428678 TMEM115Q12893 351 aaPredicted RBP17.92■□□□□ 0.46
UPK3BP1-201ENST00000428678 NFKBIBQ15653 356 aa17.92■□□□□ 0.46
UPK3BP1-201ENST00000428678 INPP5JQ15735 1006 aaPredicted RBP17.92■□□□□ 0.46
UPK3BP1-201ENST00000428678 CHRNA6Q15825 494 aa17.92■□□□□ 0.46
UPK3BP1-201ENST00000428678 ATP13A5Q4VNC0 1218 aa17.92■□□□□ 0.46
UPK3BP1-201ENST00000428678 PRR30Q53SZ7 412 aaPredicted RBP17.92■□□□□ 0.46
UPK3BP1-201ENST00000428678 CLEC17AQ6ZS10 378 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms