RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 ZDHHC20Q5W0Z9 365 aa18.11■□□□□ 0.49
PSPC1-202ENST00000427943 WDR74Q6RFH5 385 aaPredicted RBP18.11■□□□□ 0.49
PSPC1-202ENST00000427943 C11orf96Q7Z7L8 435 aa18.11■□□□□ 0.49
PSPC1-202ENST00000427943 SPC24Q8NBT2 197 aa18.11■□□□□ 0.49
PSPC1-202ENST00000427943 LSM14AQ8ND56 463 aaKnown RBP18.11■□□□□ 0.49
PSPC1-202ENST00000427943 CCDC112Q8NEF3 446 aa18.11■□□□□ 0.49
PSPC1-202ENST00000427943 CCDC110Q8TBZ0 833 aa18.11■□□□□ 0.49
PSPC1-202ENST00000427943 TTC25Q96NG3 672 aa18.11■□□□□ 0.49
PSPC1-202ENST00000427943 SLC39A1Q9NY26 324 aa18.11■□□□□ 0.49
PSPC1-202ENST00000427943 ZNF624Q9P2J8 865 aaPredicted RBP18.11■□□□□ 0.49
PSPC1-202ENST00000427943 B3GALT1Q9Y5Z6 326 aa18.11■□□□□ 0.49
PSPC1-202ENST00000427943 STX7O15400 261 aaKnown RBP18.1■□□□□ 0.49
PSPC1-202ENST00000427943 STK10O94804 968 aaKnown RBP18.1■□□□□ 0.49
PSPC1-202ENST00000427943 TJP3O95049 919 aa18.1■□□□□ 0.49
PSPC1-202ENST00000427943 FTCDO95954 541 aa18.1■□□□□ 0.49
PSPC1-202ENST00000427943 VIPP01282 170 aa18.1■□□□□ 0.49
PSPC1-202ENST00000427943 GFERP55789 205 aa18.1■□□□□ 0.49
PSPC1-202ENST00000427943 LY6DQ14210 128 aa18.1■□□□□ 0.49
PSPC1-202ENST00000427943 GPRC6AQ5T6X5 926 aa18.1■□□□□ 0.49
PSPC1-202ENST00000427943 ANKS6Q68DC2 871 aa18.1■□□□□ 0.49
PSPC1-202ENST00000427943 PEX26Q7Z412 305 aa18.1■□□□□ 0.49
PSPC1-202ENST00000427943 DTX1Q86Y01 620 aa18.1■□□□□ 0.49
PSPC1-202ENST00000427943 RASGEF1AQ8N9B8 481 aa18.1■□□□□ 0.49
PSPC1-202ENST00000427943 AVL9Q8NBF6 648 aa18.1■□□□□ 0.49
PSPC1-202ENST00000427943 DDHD1Q8NEL9 900 aa18.1■□□□□ 0.49
PSPC1-202ENST00000427943 SPATA13Q96N96 652 aa18.1■□□□□ 0.49
PSPC1-202ENST00000427943 ZCCHC2Q9C0B9 1178 aaKnown RBP18.1■□□□□ 0.49
PSPC1-202ENST00000427943 PDP2Q9P2J9 529 aa18.1■□□□□ 0.49
PSPC1-202ENST00000427943 AMFRQ9UKV5 643 aa18.1■□□□□ 0.49
PSPC1-202ENST00000427943 PCDHB11Q9Y5F2 797 aa18.1■□□□□ 0.49
PSPC1-202ENST00000427943 OR2AG2A6NM03 316 aa18.09■□□□□ 0.49
PSPC1-202ENST00000427943 OR52A4PA6NMU1 304 aa18.09■□□□□ 0.49
PSPC1-202ENST00000427943 STMND1H3BQB6 276 aa18.09■□□□□ 0.49
PSPC1-202ENST00000427943 PTMAP06454 111 aaKnown RBP18.09■□□□□ 0.49
PSPC1-202ENST00000427943 TYRP1P17643 537 aa18.09■□□□□ 0.49
PSPC1-202ENST00000427943 XRCC1P18887 633 aaPredicted RBP18.09■□□□□ 0.49
PSPC1-202ENST00000427943 WT1P19544 449 aaPredicted RBP18.09■□□□□ 0.49
PSPC1-202ENST00000427943 IDSP22304 550 aa18.09■□□□□ 0.49
PSPC1-202ENST00000427943 PBLDP30039 288 aaPredicted RBP18.09■□□□□ 0.49
PSPC1-202ENST00000427943 AKT1P31749 480 aa18.09■□□□□ 0.49
PSPC1-202ENST00000427943 ADRA1AP35348 466 aa18.09■□□□□ 0.49
PSPC1-202ENST00000427943 CTSCP53634 463 aa18.09■□□□□ 0.49
PSPC1-202ENST00000427943 C19orf57Q0VDD7 668 aa18.09■□□□□ 0.49
PSPC1-202ENST00000427943 ITGA9Q13797 1035 aa18.09■□□□□ 0.49
PSPC1-202ENST00000427943 PRPSAP1Q14558 356 aa18.09■□□□□ 0.49
PSPC1-202ENST00000427943 LDLRAP1Q5SW96 308 aa18.09■□□□□ 0.49
PSPC1-202ENST00000427943 TMEM26Q6ZUK4 368 aa18.09■□□□□ 0.49
PSPC1-202ENST00000427943 ARHGAP22Q7Z5H3 698 aa18.09■□□□□ 0.49
PSPC1-202ENST00000427943 BMPERQ8N8U9 685 aa18.09■□□□□ 0.49
PSPC1-202ENST00000427943 OR4K2Q8NGD2 314 aa18.09■□□□□ 0.49
PSPC1-202ENST00000427943 BRSK1Q8TDC3 778 aa18.09■□□□□ 0.49
PSPC1-202ENST00000427943 NAT14Q8WUY8 206 aa18.09■□□□□ 0.49
PSPC1-202ENST00000427943 CTRCQ99895 268 aa18.09■□□□□ 0.49
PSPC1-202ENST00000427943 DDA1Q9BW61 102 aa18.09■□□□□ 0.49
PSPC1-202ENST00000427943 SEMA4CQ9C0C4 833 aa18.09■□□□□ 0.49
PSPC1-202ENST00000427943 B3GNT4Q9C0J1 378 aa18.09■□□□□ 0.49
PSPC1-202ENST00000427943 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.09■□□□□ 0.49
PSPC1-202ENST00000427943 OGFRQ9NZT2 677 aa18.09■□□□□ 0.49
PSPC1-202ENST00000427943 FKBPLQ9UIM3 349 aa18.09■□□□□ 0.49
PSPC1-202ENST00000427943 AAR2Q9Y312 384 aaKnown RBP18.09■□□□□ 0.49
PSPC1-202ENST00000427943 KCTD3Q9Y597 815 aa18.09■□□□□ 0.49
PSPC1-202ENST00000427943 PCDHGA3Q9Y5H0 932 aa18.09■□□□□ 0.49
PSPC1-202ENST00000427943 SLC30A1Q9Y6M5 507 aa18.09■□□□□ 0.49
PSPC1-202ENST00000427943 MN1Q10571 1320 aaPredicted RBP18.08■□□□□ 0.49
PSPC1-202ENST00000427943 B4E171 279 aa18.08■□□□□ 0.48
PSPC1-202ENST00000427943 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.08■□□□□ 0.48
PSPC1-202ENST00000427943 PPFIA2O75334 1257 aa18.08■□□□□ 0.48
PSPC1-202ENST00000427943 PRAMEF1O95521 474 aa18.08■□□□□ 0.48
PSPC1-202ENST00000427943 VCLP18206 1134 aa18.08■□□□□ 0.48
PSPC1-202ENST00000427943 LPOP22079 712 aaPredicted RBP18.08■□□□□ 0.48
PSPC1-202ENST00000427943 TSPAN7P41732 249 aa18.08■□□□□ 0.48
PSPC1-202ENST00000427943 KIF5AQ12840 1032 aa18.08■□□□□ 0.48
PSPC1-202ENST00000427943 SPARCL1Q14515 664 aa18.08■□□□□ 0.48
PSPC1-202ENST00000427943 TAF1AQ15573 450 aaPredicted RBP18.08■□□□□ 0.48
PSPC1-202ENST00000427943 ABRAXAS1Q6UWZ7 409 aa18.08■□□□□ 0.48
PSPC1-202ENST00000427943 RANBP10Q6VN20 620 aa18.08■□□□□ 0.48
PSPC1-202ENST00000427943 DET1Q7L5Y6 550 aa18.08■□□□□ 0.48
PSPC1-202ENST00000427943 UBL4BQ8N7F7 174 aa18.08■□□□□ 0.48
PSPC1-202ENST00000427943 DTX3LQ8TDB6 740 aa18.08■□□□□ 0.48
PSPC1-202ENST00000427943 CXorf40BQ96DE9 158 aa18.08■□□□□ 0.48
PSPC1-202ENST00000427943 EPB41L1Q9H4G0 881 aa18.08■□□□□ 0.48
PSPC1-202ENST00000427943 UCK1Q9HA47 277 aa18.08■□□□□ 0.48
PSPC1-202ENST00000427943 POT1Q9NUX5 634 aa18.08■□□□□ 0.48
PSPC1-202ENST00000427943 SMOXQ9NWM0 555 aa18.08■□□□□ 0.48
PSPC1-202ENST00000427943 WDR37Q9Y2I8 494 aa18.08■□□□□ 0.48
PSPC1-202ENST00000427943 PCDHGA4Q9Y5G9 962 aa18.08■□□□□ 0.48
PSPC1-202ENST00000427943 CAPN6Q9Y6Q1 641 aa18.08■□□□□ 0.48
PSPC1-202ENST00000427943 GCN1Q92616 2671 aaKnown RBP18.08■□□□□ 0.48
PSPC1-202ENST00000427943 PIKFYVEQ9Y2I7 2098 aa18.08■□□□□ 0.48
PSPC1-202ENST00000427943 C2orf81A6NN90 581 aa18.07■□□□□ 0.48
PSPC1-202ENST00000427943 DDX3YO15523 660 aaKnown RBP18.07■□□□□ 0.48
PSPC1-202ENST00000427943 UBXN7O94888 489 aa18.07■□□□□ 0.48
PSPC1-202ENST00000427943 CDC25BP30305 580 aa18.07■□□□□ 0.48
PSPC1-202ENST00000427943 RAB15P59190 212 aa18.07■□□□□ 0.48
PSPC1-202ENST00000427943 TMPRSS15P98073 1019 aa18.07■□□□□ 0.48
PSPC1-202ENST00000427943 GPR18Q14330 331 aa18.07■□□□□ 0.48
PSPC1-202ENST00000427943 CLCA4Q14CN2 919 aa18.07■□□□□ 0.48
PSPC1-202ENST00000427943 DCAF12Q5T6F0 453 aa18.07■□□□□ 0.48
PSPC1-202ENST00000427943 AGAP9Q5VTM2 703 aa18.07■□□□□ 0.48
PSPC1-202ENST00000427943 TMEM220Q6QAJ8 160 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms